miRTarCLIP

miR-3622b-5p
miR-5693
miR-6499-3p
miR-4723-5p/5698/6870-5p/7111-...
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430
miR-484/3155
miR-3934-3p
miR-1178-3p
miR-367-5p
miR-1267
miR-3664-5p
miR-6794-3p
miR-4639-3p
miR-1304-3p
miR-5007-5p
miR-4797-5p

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 2
Read Number : 2
Read Number : 4
Read Number : 2
Read Number : 6
Read Number : 2
Read Number : 4
Read Number : 2

                                              CAUGCCA                                                                                    
                                                 GCCACUG                                                                                 
                                                   CACUGCA                                                                               
                                                   CACUGCACUCC                                                                           
                                                    ACUGCAC                                                                              
                                                       GCACUCCA                                                                          
                                                          CUCCAGC                                                                        
                                                           UCCAGCC                                                                       
                                                              AGCCUGA                                                                    
                                                                CCUGAGCA                                                                 
                                                                  UGAGCAA                                                                
                                                                     GCAACAGA                                                            
                                                                      CAACAGA                                                            
                                                                        ACAGAGU                                                          
                                                                          AGAGUGA                                                        
                                                                          AGAGUGA                                                        
                                                                            AGUGAGA                                                      
                                                                                AGACUC--U                                                
                                                                                  ACUC--U-GU                                             

                                                        CACUCCA                                                                          
                                                  CCACUGCACUCCAGCCUGAGCAACAGAGUGAGAC                                                     
......2731......2741......2751......2761......2771......2781......2791......2801........2811.......2821......2831.........2841......2851......
GAGAAUUGCAUGAACCCAGGAGGUGGAAGUUGCAGUGAGCUGAGAUCAUGCCACUGCACUCCAGCCUGAGCAACAGAGUGAGACUC--U-GUCUCAAAAAAAAAAAAGAAAGAAAAAAG---AAAAAGAAAAGAACA

                                                 GCCACTGCACTCCAGCCTGAGCAACATAGTGAG 2                                                     
                                                 GCCACTGCACTCCAGCCTGAGCAACATAGTGAGA 2                                                    
                                                  CCACTGCACTCCAGCCTGAGCAACATAGTGAGAC 4                                                   
                                                   CACTGCACTCCAGCCTGAGCAACATAGTGAG 2                                                     
                                                   CACTGCACTCCAGCCTGAGCAACATAGTGAGAC 6                                                   
                                                    ACTGCACTCCAGCCTGAGCAACATAGTGAGA 2                                                    
                                                     CTGCACTCCAGCCTGAGCAACATAGTGAGAC 4                                                   
                                                      TGCACTCCAGCCTGAGCAACATAGTGAGAC 2

NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-4797-5p	2	2807	2813	NULL	NULL	NULL	-0.006	64	-0.020	63
hsa-miR-3664-5p	2	2797	2803	NULL	NULL	NULL	-0.014	52	-0.045	64
hsa-miR-5007-5p	2	2805	2811	NULL	NULL	NULL	-0.006	36	-0.020	28
hsa-miR-4639-3p	1	2799	2805	NULL	NULL	NULL	-0.003	48	-0.010	35
hsa-miR-3155a	1	2787	2793	NULL	NULL	NULL	-0.014	68	-0.045	75
hsa-miR-3155b	1	2787	2793	NULL	NULL	NULL	-0.014	68	-0.045	75
hsa-miR-484	1	2787	2793	NULL	NULL	NULL	-0.003	57	-0.010	50
hsa-miR-5693	2	2774	2780	NULL	NULL	NULL	-0.009	63	-0.031	74
hsa-miR-1304-3p	1	2801	2807	NULL	NULL	NULL	-0.004	47	-0.014	36
hsa-miR-1267	1	2795	2801	NULL	NULL	NULL	-0.004	33	-0.014	25
hsa-miR-367-5p	3	2794	2801	NULL	NULL	NULL	-0.040	70	-0.134	81
hsa-miR-6499-3p	1	2776	2782	NULL	NULL	NULL	-0.003	43	-0.010	23
hsa-miR-3934-3p	3	2789	2796	NULL	NULL	NULL	-0.067	72	-0.230	92
hsa-miR-3135b	2	2783	2789	NULL	NULL	NULL	-0.022	62	-0.073	70
hsa-miR-504-3p	3	2780	2787	NULL	NULL	NULL	-0.028	70	-0.094	77
hsa-miR-122-5p	1	2781	2787	NULL	NULL	NULL	-0.016	55	-0.053	64
hsa-miR-3622b-5p	1	2771	2777	NULL	NULL	NULL	-0.045	65	-0.153	79
hsa-miR-3652	2	2784	2790	NULL	NULL	NULL	-0.029	58	-0.097	76
hsa-miR-4430	2	2784	2790	NULL	NULL	NULL	-0.027	55	-0.090	74
hsa-miR-143-5p	2	2777	2783	NULL	NULL	NULL	-0.008	51	-0.025	64
hsa-miR-6794-3p	2	2799	2805	NULL	NULL	NULL	-0.006	43	-0.020	33
hsa-miR-1178-3p	1	2791	2797	NULL	NULL	NULL	-0.003	44	-0.010	33
hsa-miR-5698	-6	2776	2787	NULL	NULL	NULL	NULL	NULL	NULL	NULL