miRTarCLIP

miR-564
miR-891-3p
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430
miR-744-3p
miR-4423-5p
miR-6501-5p
miR-4294

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 2
Read Number : 2
Read Number : 2
Read Number : 2
Read Number : 2
Read Number : 2
Read Number : 2
Read Number : 2

                                             CCGUGCCA                                                                                           
                                               GUGCCAC                                                                                          
                                                 GCCACUG                                                                                        
                                                   CACUGCACUCC                                                                                  
                                                   CACUGCA                                                                                      
                                                    ACUGCAC                                                                                     
                                                       GCACUCCA                                                                                 
                                                          CUCCAGC                                                                               
                                                           UCCAGCC                                                                              
                                                                    GGCAACA                                                                     
                                                                    GGCAACA                                                                     
                                                                    GGCAACA                                                                     
                                                                                AGACUCC                                                         

                                                        CACUCCA                                                                                 
                                                   CACUGCACUCCAGCCUGGGCAACACAGCGAGACUCCGUCU                                                     
..1081......1091......1101......1111.......1121......1131......1141......1151......1161......1171......1181................1191......1201........
AGAAUGGUAUGAAUCCAGGAGGUGGAGCUUGCAGUG-AGCCGAGACCGUGCCACUGCACUCCAGCCUGGGCAACACAGCGAGACUCCGUCUCGAGGAAAAAAAAAGAAAA----------GAUACGUGCCUGCGGUGAGG--AA

                                                   CACTGCACTCCAGCCTGAGCAACACAGCGAGACTCC 2                                                       
                                                   CACTGCACTCCAGCCTGAGCAACACAGCGAG 2                                                            
                                                   CACTGCACTCCAGCCTGGGCAACACAGCGAGACTCC 2                                                       
                                                       GCACTCCAGCCTGGGCAACACAGCGAGACTCCGTCT 2                                                   
                                                        CACTCCAGCCTGGGCAACACAGCGAGACTCCGTCT 2                                                   
                                                        CACTCCAGCCTGGGCAACCCAGCGAGACTCCGTCTC 2                                                  
                                                         ACTCCAGCCTGAGCAACACAGCGAGACTCCGTC 2                                                    
                                                                                        TCTCGCGGAAAAAAAAA 2

NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-5693	2	1127	1133	NULL	NULL	NULL	-0.020	74	-0.020	53
hsa-miR-6499-3p	1	1129	1135	NULL	NULL	NULL	-0.010	56	-0.010	23
hsa-miR-3135b	2	1136	1142	NULL	NULL	NULL	-0.066	78	-0.066	68
hsa-miR-4294	2	1158	1164	NULL	NULL	NULL	-0.039	66	-0.039	53
hsa-miR-504-3p	3	1133	1140	NULL	NULL	NULL	-0.120	88	-0.120	81
hsa-miR-122-5p	1	1134	1140	NULL	NULL	NULL	-0.010	46	-0.010	18
hsa-miR-564	3	1123	1130	NULL	NULL	NULL	-0.403	96	-0.403	95
hsa-miR-3652	2	1137	1143	NULL	NULL	NULL	-0.051	70	-0.051	57
hsa-miR-4430	2	1137	1143	NULL	NULL	NULL	-0.044	65	-0.044	51
hsa-miR-143-5p	2	1130	1136	NULL	NULL	NULL	-0.020	68	-0.020	42
hsa-miR-891a-3p	2	1125	1131	NULL	NULL	NULL	-0.033	65	-0.033	51
hsa-miR-6501-5p	1	1146	1152	NULL	NULL	NULL	-0.175	81	-0.175	67
hsa-miR-4423-5p	1	1146	1152	NULL	NULL	NULL	-0.078	70	-0.078	51
hsa-miR-744-3p	2	1146	1152	NULL	NULL	NULL	-0.096	80	-0.096	68
hsa-miR-5698	-6	1129	1140	NULL	NULL	NULL	NULL	NULL	NULL	NULL