miRTarCLIP

miR-6748-3p
miR-4421/5699-3p
miR-1915-3p/6764-5p
miR-4323
miR-6769-3p
miR-3943
miR-4280
miR-4433b-3p
miR-4433a-3p
miR-4722-5p
miR-1286
miR-3908
miR-7156-3p
miR-1301-3p/5047
miR-16-3p
miR-6081
miR-939-5p/1343-5p

miR-122-5p
miR-873-5p.2
miR-103-3p/107
miR-25-3p/32-5p/92-3p/363-3p/3...
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 5
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 2
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 20
Read Number : 2
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 29
Read Number : 3
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1

                                                             GGACAGGA                                                                                                                                                                                                                                                  
                                                              GACAGGA                                                                                                                                                                                                                                                  
                                                                     CC----------CU--GGG                                                                                                                                                                                                                               
                                                                                  U--GGG--GCUA                                                                                                                                                                                                                         
                                                                                     GGG--GCUA                                                                                                                                                                                                                         
                                                                                     GGG--GCUA                                                                                                                                                                                                                         
                                                                                           CUACACU                                                                                                                                                                                                                     
                                                                                              CACUCCU                                                                                                                                                                                                                  
                                                                                               ACUCCUG                                                                                                                                                                                                                 
                                                                                                CUCCUGCA                                                                                                                                                                                                               
                                                                                                 UCCUGCA                                                                                                                                                                                                               
                                                                                                      CAUUGCU                                                                                                                                                                                                          
                                                                                                          GCUGCAA                                                                                                                                                                                                      
                                                                                                          GCUGCAA                                                                                                                                                                                                      
                                                                                                               AAUACUG                                                                                                                                                                                                 
                                                                                                                   CUGCUCC                                                                                                                                                                                             
                                                                                                                     GCUCCCC                                                                                                                                                                                           

                                                                                             ACACUCC                                                                                                                                                                                                                   
                                                                                                 UCCUGCA                                                                                                                                                                                                               
                                                                                                         UGCUGCA                                                                                                                                                                                                       
                                                                                                            UGCAAUA                                                                                                                                                                                                    
                                                                    ACC          CU  GGG  GCUACACUCCUGCAUUGCUGCAAUACUG                                                                                                                                                                                                 
......31.........41..........51...................61.........71..................81............91........101.......111.............121.......................................................131................................................................................................141.......151............
---CUCCAUCUGGGAA-CUAACA--GCUGCUAACC-----------UGACCAGCCGC-UCAGGACAGGACC----------CU--GGG--GCUACACUCCUGCAUUGCUGCAAUACUGCUCCCC------CAGC----C--------------------------------------------UCUCCCC---------------------------------------------------------------------------UG----------CCCC---UCA-ACCUGCCUUAGCU-----GCACU

                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACT 5                                                                                                                                                                                                
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACTT 1                                                                                                                                                                                               
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATAC 1                                                                                                                                                                                                 
                                                                    ACC          CT  GGG  GCTACACTCCTG 2                                                                                                                                                                                                               
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACTT 2                                                                                                                                                                                               
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACT 1                                                                                                                                                                                                
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATA 1                                                                                                                                                                                                  
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACTT 1                                                                                                                                                                                               
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATAC 2                                                                                                                                                                                                 
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACT 1                                                                                                                                                                                                
                                                                    ACC          CT  GGG  GCTACACTCCTTCATTGCTGCAATAC 1                                                                                                                                                                                                 
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATA 1                                                                                                                                                                                                  
                                                                    ACC          CT  GGT  GCTACACTCCTGCATTGCTGC 1                                                                                                                                                                                                      
                                                                    ACC          CT  GGG  GCTACACTC 2                                                                                                                                                                                                                  
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACT 1                                                                                                                                                                                                
                                                                    ACC          CT  GGG  GCTACACTCCTGCATTGCTGCAATACTG 20                                                                                                                                                                                              
                                                                                  T  GGG  GCTACACTCCTGCATTGCTGCAATACTG 2                                                                                                                                                                                               
                                                                                           CTACACTCCTGCATTG 1                                                                                                                                                                                                          
                                                                                           CTACACTCCTGCAGTGCTGCAATACTG 1                                                                                                                                                                                               
                                                                                           CTACACTCCTGCATTGCTGCAATACTG 1                                                                                                                                                                                               
                                                                                           CTACACTCCTGCATTGCTGCAATACG 1                                                                                                                                                                                                
                                                                                           CTACACTCCTGNATTGCTGCAATACTG 1                                                                                                                                                                                               
                                                                                           GTACACTCCTGCATTGCTGCAATACTG 1                                                                                                                                                                                               
                                                                                           CTATACTCCTGCATTGCTGCAATACTG 1                                                                                                                                                                                               
                                                                                           CTACACTCCTGCATTGCTGCAATACTG 2                                                                                                                                                                                               
                                                                                           CTACACTCCTGCATTGCTGCAATACTG 29                                                                                                                                                                                              
                                                                                           CTACACTCCTGCATTGCTGCAATACT 3                                                                                                                                                                                                
                                                                                             ACACTCCTGCATTCCTG 1                                                                                                                                                                                                       
                                                                                                CTCCTGCATTGCTGCAATACTG 1                                                                                                                                                                                               
                                                                                                   CTGCATTGCTTCAATACT 1                                                                                                                                                                                                
                                                                                                   CTGCATTGCTGCAATACTG 1

NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (NULL)
Conserved (7mer-1a) (0.33)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-3908	2	98	104	NULL	NULL	NULL	-0.020	73	-0.020	57
hsa-miR-4323	3	82	89	NULL	NULL	NULL	-0.282	97	-0.282	96
hsa-miR-3943	1	83	89	NULL	NULL	NULL	-0.090	81	-0.090	74
hsa-miR-6769a-3p	1	83	89	NULL	NULL	NULL	-0.106	90	-0.106	86
hsa-miR-4433b-3p	2	90	96	NULL	NULL	NULL	-0.110	85	-0.110	79
hsa-miR-4280	2	87	93	NULL	NULL	NULL	-0.020	61	-0.020	43
hsa-miR-25-3p	1	104	110	NULL	NULL	NULL	-0.010	59	-0.010	40
hsa-miR-32-5p	1	104	110	NULL	NULL	NULL	-0.010	55	-0.010	35
hsa-miR-363-3p	1	104	110	NULL	NULL	NULL	-0.010	55	-0.010	35
hsa-miR-367-3p	1	104	110	NULL	NULL	NULL	-0.021	66	-0.021	56
hsa-miR-92a-3p	1	104	110	NULL	NULL	NULL	-0.010	59	-0.010	39
hsa-miR-92b-3p	1	104	110	NULL	NULL	NULL	-0.010	60	-0.010	40
hsa-miR-4433a-3p	2	91	97	NULL	NULL	NULL	-0.040	81	-0.040	74
hsa-miR-16-1-3p	2	107	113	NULL	NULL	NULL	-0.020	60	-0.020	39
hsa-miR-1915-3p	2	79	85	NULL	NULL	NULL	-0.087	87	-0.087	81
hsa-miR-6764-5p	2	79	85	NULL	NULL	NULL	-0.134	91	-0.134	89
hsa-miR-6748-3p	3	71	78	NULL	NULL	NULL	-0.330	97	-0.330	96
hsa-miR-4421	1	72	78	NULL	NULL	NULL	-0.080	78	-0.080	65
hsa-miR-5699-3p	1	72	78	NULL	NULL	NULL	-0.055	73	-0.055	58
hsa-miR-103a-3p	1	101	107	NULL	NULL	NULL	-0.224	95	-0.224	93
hsa-miR-107	1	101	107	NULL	NULL	NULL	-0.224	95	-0.224	93
hsa-miR-873-5p.2	1	93	99	NULL	NULL	NULL	-0.129	87	-0.129	81
hsa-miR-1286	1	93	99	NULL	NULL	NULL	-0.064	81	-0.064	75
hsa-miR-4722-5p	3	92	99	NULL	NULL	NULL	-0.253	97	-0.253	97
hsa-miR-6081	2	111	117	NULL	NULL	NULL	-0.164	82	-0.164	76
hsa-miR-122-5p	2	89	95	NULL	NULL	NULL	-0.090	85	-0.090	78
hsa-miR-1343-5p	2	113	119	NULL	NULL	NULL	-0.218	93	-0.218	91
hsa-miR-939-5p	2	113	119	NULL	NULL	NULL	-0.251	94	-0.251	92
hsa-miR-7156-3p	1	102	108	NULL	NULL	NULL	-0.122	85	-0.122	78
hsa-miR-1301-3p	1	102	108	NULL	NULL	NULL	-0.210	94	-0.210	92
hsa-miR-5047	1	102	108	NULL	NULL	NULL	-0.162	91	-0.162	87