miRTarCLIP

miR-619-3p
miR-631/3661
miR-4781-3p
miR-5007-3p
miR-4524-5p
miR-646
miR-499b-5p

miR-192-5p/215-5p
miR-103-3p/107
miR-15-5p/16-5p/195-5p/424-5p/...
miR-503-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 70
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 3
Read Number : 1
Read Number : 4
Read Number : 3
Read Number : 2
Read Number : 25
Read Number : 33
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 28
Read Number : 1
Read Number : 1
Read Number : 1

                                             UCCA---GGU                                                                                      
                                              CCA---GGUCA                                                                                    
                                                       CAACAUA                                                                               
                                                          CAUAUGA                                                                            
                                                                  GCUGC-U-A                                                                  
                                                                  GCUGC-U-A                                                                  
                                                                            AAGUCUG                                                          

                                                A---GGUCAA                                                                                   
                                                                AUGCUGC                                                                      
                                                                 UGCUGC-U-A                                                                  
                                                                  GCUGC-U-A                                                                  
                                                      UCAACAUAUGAUGCUGC U AUAAG                                                              
.........1801......1811......1821......1831.........1841......1851........1861......1871........1881......1891......1901.......1911.......1921......
UUAUACC-AAUUGCUAGACCCAGGAUGUAUCUUUAAUUCUUGUCAUCCA---GGUCAACAUAUGAUGCUGC-U-AUAAGUCUGGGGCU-CAA-AUUGAUAUCCCAGUAGCAAUAAACAUA-UAAUAUAGGAGGAGUC-UGA

                                                      TCAACATATGATGCTGC T ATAAG 70                                                           
                                                      TCAACATATTATGCTGC T ATAAG 1                                                            
                                                      TCAACATATGATGCTGC T A 1                                                                
                                                      TAAACATATGATGCTGC T ATAA 1                                                             
                                                      TCAACATATGATGCTGC T ATAATTCTG 1                                                        
                                                      TCAACATATGATGCTGC T AAAAG 1                                                            
                                                      TCAACATATGATGCTGC T AT 3                                                               
                                                      TCAACATATGATGCTGC T ATAA 1                                                             
                                                      TCAACATATGATGCTGC T ATAAG 4                                                            
                                                      TCAACATATGATGCTGC T ATA 3                                                              
                                                      TCAACATATGATGCTGC T ATT 2                                                              
                                                      TCAACATATGATGCTGC T AT 25                                                              
                                                      TCAACATATGATGCTGC T ATA 33                                                             
                                                      TCAACATATGGTGCTGC T ATAA 1                                                             
                                                      TCAACATATGATGCT 2                                                                      
                                                      TCAACATATGATGCTGC T ATAAG 1                                                            
                                                      TCAACATATGATGCTGC T ATA 2                                                              
                                                      TCAACATATGATGCTGC T ATAAATC 1                                                          
                                                      TCAACATATGATGCTGC T AT 2                                                               
                                                      TCAACATATGATGCTGC T ATAAA 1                                                            
                                                      TCAGCATATGATGCTGC T ATAAG 1                                                            
                                                      TCAACATATGATGATGC T ATAAG 1                                                            
                                                      ACAACATATGATGCTGC T ATA 1                                                              
                                                      TCAACATATGATGCTGC T ATAA 28                                                            
                                                         TCATATGATGCTGC T ATAAG 1                                                            
                                                          CATATGATGCTGC T ATAA 1                                                             
                                                            TATGATGCTGC T ATAA 1

NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)
Conserved (7mer-m8) (0.64)
Conserved (8mer) (0.80)
Conserved (7mer-1a) (0.70)

Conserved

miRNA Name	seed match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-103a-3p	2	1853	1859	NULL	NULL	NULL	-0.239	95	-0.247	94
hsa-miR-107	2	1853	1859	NULL	NULL	NULL	-0.239	95	-0.247	94
hsa-miR-15b-5p	3	1854	1861	NULL	NULL	NULL	-0.392	98	-0.406	98
hsa-miR-424-5p	3	1854	1861	NULL	NULL	NULL	-0.435	99	-0.451	99
hsa-miR-15a-5p	3	1854	1861	NULL	NULL	NULL	-0.392	98	-0.406	98
hsa-miR-16-5p	3	1854	1861	NULL	NULL	NULL	-0.392	98	-0.406	98
hsa-miR-195-5p	3	1854	1861	NULL	NULL	NULL	-0.392	98	-0.406	98
hsa-miR-497-5p	3	1854	1861	NULL	NULL	NULL	-0.404	99	-0.419	98
hsa-miR-6838-5p	3	1854	1861	NULL	NULL	NULL	-0.394	98	-0.408	98
hsa-miR-503-5p	1	1855	1861	NULL	NULL	NULL	-0.268	98	-0.277	97

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-619-3p	2	1837	1843	NULL	NULL	NULL	-0.128	92	-0.132	88
hsa-miR-646	1	1855	1861	NULL	NULL	NULL	-0.214	96	-0.221	94
hsa-miR-4781-3p	1	1844	1850	NULL	NULL	NULL	-0.063	85	-0.065	77
hsa-miR-499b-5p	2	1863	1869	NULL	NULL	NULL	-0.058	78	-0.060	68
hsa-miR-3661	3	1838	1845	NULL	NULL	NULL	-0.481	99	-0.499	98
hsa-miR-631	3	1838	1845	NULL	NULL	NULL	-0.514	99	-0.533	99
hsa-miR-4524a-5p	2	1855	1861	NULL	NULL	NULL	-0.265	94	-0.274	92
hsa-miR-4524b-5p	2	1855	1861	NULL	NULL	NULL	-0.265	94	-0.274	92
hsa-miR-5007-3p	2	1847	1853	NULL	NULL	NULL	-0.071	81	-0.073	71
hsa-miR-192-5p	1	1840	1846	NULL	NULL	NULL	-0.167	92	-0.172	89
hsa-miR-215-5p	1	1840	1846	NULL	NULL	NULL	-0.170	92	-0.176	89