miRTarCLIP

miR-6776-3p
miR-497-3p
miR-548aa/548ap-3p/548t-3p
miR-4668-5p
miR-3153/6733-5p/6739-5p
miR-204-3p/4646-5p
miR-4292/6791-5p
miR-7976
miR-3173-5p/6799-3p
miR-146b-3p
miR-3157-3p
miR-1915-5p
miR-7109-3p
miR-1261
miR-106a-3p
miR-504-3p
miR-516b-5p

miR-874-3p
miR-130-3p/301-3p/3666/4295/45...
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 4
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 2
Read Number : 2
Read Number : 5
Read Number : 7
Read Number : 1
Read Number : 1
Read Number : 5
Read Number : 2
Read Number : 2
Read Number : 4
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 3
Read Number : 2
Read Number : 9
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1

                                                     GGUGGUU                                                                                  
                                                      GUGGUUU                                                                                 
                                                       UGGUUUU                                                                                
                                                          UUUUCCCA                                                                            
                                                           UUUCCCA                                                                            
                                                            UUCCCAG                                                                           
                                                              CCCAGGG                                                                         
                                                                CAGGGCA                                                                       
                                                                CAGGGCA                                                                       
                                                                CAGGGCA                                                                       
                                                                 AGGGCAA                                                                      
                                                                   GGCAAGG                                                                    
                                                                       AGGCUUA                                                                
                                                                           UUAUCCA                                                            
                                                                                CAUUGCA                                                       
                                                                                    GCACUCCA                                                  
                                                                                       CUCCAGA                                                

                                                                CAGGGCAA                                                                      
                                                                                  UUGCACU                                                     
                                                                                     CACUCCA                                                  
                                                   AAGGUGGUUUUCCCAGGGCAAGGCUUAUCCAUUGCACUCCA                                                  
..411.......421.......431.......441.......451........461.......471.......481.......491.......501.......511.......521.................531.......
AAAUAUAUGCAAUAUAUACUUACCUGGCAGGGAAGAUUACCAUGAUCAC-GAAGGUGGUUUUCCCAGGGCAAGGCUUAUCCAUUGCACUCCAGAUGUGCUGACCCCUUCAAUUUCCCAAA----------AUGUGGAAAACU

                                               AC GAAGGTGGTTTTCCCAG 1                                                                         
                                                C GAAGGTGGTTTTCCCAGGGCGAGGCT 1                                                                
                                                  GAAGGTGGTTTTCCCAGGGCGAGGCTTA 1                                                              
                                                   AAGGTGGTTTTCCCAGGGCGAGGCTTATCCAT 1                                                         
                                                   AAGGTGGTTTTCCCAGAGC 1                                                                      
                                                         GTTTTCCCAGGGCGAGGCTTATCCATT 1                                                        
                                                          TTTTCCCAGGGCGAGGCTTATCC 1                                                           
                                                          TTTTCCCAGGGCGAGGCTTATCCATTG 1                                                       
                                                          TTTTCCCAGGGCGAGGCTTATCCATT 1                                                        
                                                          TTTTCCCAGGGCAAGGCTTATCCATTG 1                                                       
                                                            TTCCCAGGGCGAGGCTTATCCA 1                                                          
                                                            TTCCCAGGGCGAGGCTTA 1                                                              
                                                              CCCAGGGCGAGGCTTATCCA 1                                                          
                                                              CCCAGGGCGAGGCTTATCC 1                                                           
                                                              CCCAGGGCGAGGCTTATC 1                                                            
                                                               CCAGGGCGAGGCTTATCCATTG 1                                                       
                                                               CCAGGGCGAGGCTTATCC 1                                                           
                                                               CCAGGGCGAGGCTTATCCATT 1                                                        
                                                               CCAGGGCGAGGCTTATCCATTG 4                                                       
                                                               CCAGGGCGAGGCTTATCCA 1                                                          
                                                               CCAGGGCGAGGCTTATCCATT 1                                                        
                                                               CCAGGGCGAGGCTTATCC 1                                                           
                                                               CCAGGGCGAGGCTTATCCATTG 2                                                       
                                                                CAGGGCGAGGCTTATCCATTG 2                                                       
                                                                CAGGGCGAGGCTTATCCATTG 2                                                       
                                                                CAGGGCGAGGCTTATCCATTG 5                                                       
                                                                CAGGGCGAGGCTTATCCATTG 7                                                       
                                                                CAGGGCGAGGCTTATCCATTG 1                                                       
                                                                CAGGGCGAGGCTTATCCATT 1                                                        
                                                                 AGGGCGAGGCTTATCCATT 5                                                        
                                                                 AGGGCGAGGCTTATCCATT 2                                                        
                                                                 AGGGCGAGGCTTATCCATT 2                                                        
                                                                 AGGGCGAGGCTTATCCATTG 4                                                       
                                                                 AGGGCGAGGCTTATCCATTG 1                                                       
                                                                 AGGGCGAGGCTTATCCATTG 1                                                       
                                                                         TCTTATCCATTGCACTCC 1                                                 
                                                                          CTTATCCATTGCCCT 3                                                   
                                                                          CTTATCCATTGCACTCCG 2                                                
                                                                          CTTATCCATTGCACTCC 9                                                 
                                                                          CTTATCCAGTGCACTC 1                                                  
                                                                          CTTATCCATTGCACTCC 1                                                 
                                                                           TTATCCATTGCACTCCG 1                                                
                                                                                     CACTCCGGATGTGCTGACCCC 1                                  
                                                                                        TCCGGATGTGCTGACCCCT 1

NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (8mer) (NULL)
Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-548aa	2	463	469	NULL	NULL	NULL	-0.005	44	-0.020	36
hsa-miR-548ap-3p	2	463	469	NULL	NULL	NULL	-0.005	45	-0.020	36
hsa-miR-548t-3p	2	463	469	NULL	NULL	NULL	-0.005	44	-0.020	36
hsa-miR-497-3p	2	462	468	NULL	NULL	NULL	-0.005	65	-0.020	68
hsa-miR-6776-3p	2	461	467	NULL	NULL	NULL	-0.039	73	-0.148	85
hsa-miR-7109-3p	1	479	485	NULL	NULL	NULL	-0.024	66	-0.090	77
hsa-miR-130a-3p	2	490	496	NULL	NULL	NULL	-0.013	52	-0.050	64
hsa-miR-130b-3p	2	490	496	NULL	NULL	NULL	-0.013	51	-0.050	64
hsa-miR-301a-3p	2	490	496	NULL	NULL	NULL	-0.010	49	-0.039	58
hsa-miR-301b-3p	2	490	496	NULL	NULL	NULL	-0.013	51	-0.050	64
hsa-miR-3666	2	490	496	NULL	NULL	NULL	-0.013	50	-0.050	64
hsa-miR-4295	2	490	496	NULL	NULL	NULL	-0.016	55	-0.061	70
hsa-miR-454-3p	2	490	496	NULL	NULL	NULL	-0.014	50	-0.053	64
hsa-miR-4292	2	470	476	NULL	NULL	NULL	-0.039	61	-0.149	80
hsa-miR-6791-5p	2	470	476	NULL	NULL	NULL	-0.031	56	-0.116	71
hsa-miR-1915-5p	2	475	481	NULL	NULL	NULL	-0.031	57	-0.116	69
hsa-miR-204-3p	2	468	474	NULL	NULL	NULL	-0.005	52	-0.020	50
hsa-miR-4646-5p	2	468	474	NULL	NULL	NULL	-0.005	40	-0.020	33
hsa-miR-7976	1	472	478	NULL	NULL	NULL	-0.017	42	-0.064	62
hsa-miR-3173-5p	1	472	478	NULL	NULL	NULL	-0.003	38	-0.010	30
hsa-miR-6799-3p	1	472	478	NULL	NULL	NULL	-0.003	36	-0.010	28
hsa-miR-146b-3p	1	472	478	NULL	NULL	NULL	-0.006	36	-0.022	41
hsa-miR-504-3p	3	492	499	NULL	NULL	NULL	-0.054	79	-0.212	92
hsa-miR-122-5p	1	493	499	NULL	NULL	NULL	-0.026	62	-0.099	80
hsa-miR-4668-5p	3	466	473	NULL	NULL	NULL	-0.008	35	-0.030	38
hsa-miR-3153	1	467	473	NULL	NULL	NULL	-0.003	49	-0.010	40
hsa-miR-6733-5p	1	467	473	NULL	NULL	NULL	-0.003	39	-0.010	30
hsa-miR-6739-5p	1	467	473	NULL	NULL	NULL	-0.003	38	-0.010	29
hsa-miR-516b-5p	2	495	501	NULL	NULL	NULL	-0.028	55	-0.106	69
hsa-miR-106a-3p	2	488	494	NULL	NULL	NULL	-0.005	46	-0.020	39
hsa-miR-3157-3p	1	473	479	NULL	NULL	NULL	-0.021	45	-0.078	69
hsa-miR-874-3p	3	472	479	NULL	NULL	NULL	-0.043	67	-0.164	85
hsa-miR-1261	2	483	489	NULL	NULL	NULL	-0.012	35	-0.043	37