Cluster List : 302~323

miR-504-3p
miR-3135b
miR-4487

miR-122-5p
miR-28-5p/708-5p/3139
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
                                                                            CACU---CCA                                                                                                  
                                                                              CU---CCAGC                                                                                                
                                                                                   CCAGCUC                                                                                              

                                                                            CACU---CCA                                                                                                  
                                                                                     AGCUCCU                                                                                            
                                                             UGGUUCAAAUUCUGCCACU   CCA                                                                                                  
..........261..........271..........281.......291...........301.......311..........321.......331.......341.....................351.........................361.......371..............381.......
GUCAAACAA-AUGUGACUU---AUGCUGGUGCC---CUCGCCCUGCUGA----UCAGAUUCUGGUUCAAAUUCUGCCACU---CCAGCUCCUGGGUUAGGGGCUUUGCU------G--------UAAGUUUCUUU------------------UUCUGGACUUUAGAUCCUGAA-------CCU

                                                A    TCAGATTCGGGTTC 1                                                                                                                   
                                                            CAGGTTCAAATTCTGCCA 1                                                                                                        
                                                            CAGGTTCAAATTCTGCCACT   CC 1                                                                                                 
                                                            CAGGTTCAAATTCTGCCACT    1                                                                                                   
                                                             AGGTTCAAATTCTGCCACT   CC 1                                                                                                 
                                                               GTTCGAATTCTGCCACT   CC 1                                                                                                 
                                                               GTTCAAATTCTGCCACT    2                                                                                                   
                                                               GTTCGAATTCTGCCA 1                                                                                                        
                                                               GTTCGAATTCTGCCAC    1                                                                                                    
                                                                TTCAAATTCTGCCACT   CCA 1                                                                                                
                                                                TTCAAATTCTTCCACT   CC 1                                                                                                 
                                                                TTCAAATTCTGCCACT   CCG 1                                                                                                
                                                                 TCAAATTCTCCCACT   CC 1                                                                                                 
                                                                  CAAATTCTGCCACT   CC 1                                                                                                 
                                                                  CAAATTCTGCCACT   CCG 1                                                                                                
                                                                    AATTCTGCCACT   CCG 1                                                                                                
                                                                      TTCAGCCACT   CCAGCT 1                                                                                             
      

NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)
Conserved (7mer-m8) (NULL)

Conserved
miRNA Name seed match mirna start mirna end 3' pairing contribution local AU contribution position contribution TA contribution SPS contribution context+ score context+ score percentile
Nonconserved
miRNA Name seed_match mirna start mirna end 3' pairing contribution local AU contribution position contribution TA contribution SPS contribution context+ score context+ score percentile
hsa-miR-28-5p2323329NULLNULLNULL-0.02049-0.06866
hsa-miR-31392323329NULLNULLNULL-0.02351-0.07870
hsa-miR-708-5p2323329NULLNULLNULL-0.01138-0.03546
hsa-miR-44872321327NULLNULLNULL-0.04963-0.16782
hsa-miR-3135b2319325NULLNULLNULL-0.03569-0.11983
hsa-miR-504-3p1317323NULLNULLNULL-0.00344-0.01033
hsa-miR-122-5p1317323NULLNULLNULL-0.01855-0.05867