miRTarCLIP

miR-3927-5p
miR-337-3p
miR-3685
miR-1277-5p
miR-4519
miR-548e-5p
miR-7849-3p
miR-4666-3p

miR-202-5p
miR-384
miR-15-5p/16-5p/195-5p/424-5p/...
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 3
Read Number : 3
Read Number : 3
Read Number : 2
Read Number : 1
Read Number : 2
Read Number : 3
Read Number : 1

                                                                                        GAUAGGA                                                                                                                                          
                                                                                         AUAGGAA                                                                                                                                         
                                                                                          UAGGAAA                                                                                                                                        
                                                                                                AUAUAUU                                                                                                                                  
                                                                                                       CACUGCU                                                                                                                           
                                                                                                             UGCUUU-U-A                                                                                                                  
                                                                                                                      A-AUUGUA                                                                                                           
                                                                                                                        AUUGUAU                                                                                                          

                                                                                         AUAGGAA                                                                                                                                         
                                                                                          UAGGAAA                                                                                                                                        
                                                                                                          UGCUGCU                                                                                                                        
                                                                                              AAAUAUAUUCACUGCUGCUUU U A AUUG                                                                                                             
........121.........131........................................141...............151.......161.......171.......181..........191........201................................211.......221..............................231.............241.......
CACAUG-UAU--AAAGUUUACAU----AAA-----------GAA---------G---------U--------UUUUUUAAGUUAUUGAGAUAGGAAAUAUAUUCACUGCUGCUUU-U-A-AUUGUAUUUUA-UCCA-A---U-----------U--------ACAUU--UAAUACACUAAAAAAAA------------U-----------CUUGUU---G-G-AAUU-CUGUU

                                                                                              AAATATATTCACTGCTGCTTT T A ATTG 3                                                                                                           
                                                                                              AAATATATTCACTGCTGCTTT T A ATTG 3                                                                                                           
                                                                                              AAATATATTCACTGCTGCTTT T A ATTG 3                                                                                                           
                                                                                               AATATATTCACTGCTGCTTT T A  2                                                                                                               
                                                                                                AAATATTCACTGCTGCTTT T A ATTG 1                                                                                                           
                                                                                                 AATATTCACTGCTGCTTT T A AT 2                                                                                                             
                                                                                                    TTTCACTGCTGCTTT T A  3                                                                                                               
                                                                                                     TTCACTGCTGCTTT T A T 1

NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)
Conserved (7mer-1a) (NULL)
Conserved (7mer-m8) (0.49)

Conserved

miRNA Name	seed match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-195-5p	2	176	182	NULL	NULL	NULL	-0.438	99	-0.438	99
hsa-miR-497-5p	2	176	182	NULL	NULL	NULL	-0.369	98	-0.369	98
hsa-miR-15a-5p	2	176	182	NULL	NULL	NULL	-0.394	98	-0.394	98
hsa-miR-15b-5p	2	176	182	NULL	NULL	NULL	-0.383	98	-0.383	98
hsa-miR-16-5p	2	176	182	NULL	NULL	NULL	-0.438	99	-0.438	99
hsa-miR-6838-5p	2	176	182	NULL	NULL	NULL	-0.373	98	-0.373	98
hsa-miR-424-5p	2	176	182	NULL	NULL	NULL	-0.369	98	-0.369	97

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-548e-5p	3	179	186	NULL	NULL	NULL	-0.260	99	-0.260	98
hsa-miR-1277-5p	2	166	172	NULL	NULL	NULL	-0.055	91	-0.055	87
hsa-miR-7849-3p	1	186	192	NULL	NULL	NULL	-0.068	95	-0.068	93
hsa-miR-4519	2	173	179	NULL	NULL	NULL	-0.294	97	-0.294	96
hsa-miR-4666a-3p	2	187	193	NULL	NULL	NULL	-0.172	98	-0.172	97
hsa-miR-3927-5p	1	158	164	NULL	NULL	NULL	-0.255	96	-0.255	94
hsa-miR-337-3p	1	159	165	NULL	NULL	NULL	-0.237	96	-0.237	94
hsa-miR-202-5p	1	159	165	NULL	NULL	NULL	-0.265	97	-0.265	96
hsa-miR-3685	1	160	166	NULL	NULL	NULL	-0.100	91	-0.100	87
hsa-miR-384	1	160	166	NULL	NULL	NULL	-0.172	95	-0.172	92