miRTarCLIP

miR-200-5p
miR-4433b-3p
miR-4433a-3p
miR-4722-5p
miR-6165
miR-214-3p/761/3619-5p
miR-1237-5p/4488/4697-5p
miR-6846-5p/6848-5p
miR-4426/4647/4662
miR-766-5p
miR-765
miR-6894-5p
miR-7154-3p
miR-6515-5p
miR-4443
miR-4433a-3p
miR-4722-5p
miR-940/6808-5p/6893-5p
miR-4514/4692

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 4
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 25
Read Number : 2
Read Number : 2
Read Number : 8
Read Number : 2
Read Number : 5
Read Number : 10
Read Number : 26
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 2
Read Number : 3
Read Number : 1

                                                  UAAGA-UA                                                                                                             
                                                          CACUCCU                                                                                                      
                                                           ACUCCU---G                                                                                                  
                                                            CUCCU---GC                                                                                                 
                                                             UCCU---GCU                                                                                                
                                                              CCU---GCU------------G                                                                                   
                                                                                     GCCCCC-A                                                                          
                                                                                     GCCCCC-A                                                                          
                                                                                         CC-AUCUU                                                                      
                                                                                                UUC---CUCC-A                                                           
                                                                                                 UC---CUCC-A                                                           
                                                                                                 UC---CUCC-A                                                           
                                                                                                 UC---CUCC-A                                                           
                                                                                                  C---CUCC-AA                                                          
                                                                                                  C---CUCC-AA                                                          
                                                                                                                A-CUCCUG                                               
                                                                                                                  CUCCUGC                                              
                                                                                                                    CCUGCCU                                            
                                                                                                                     CUGCCUG                                           

                                                         ACACUCC                                                                                                       
                                                      A UACACUCCU   GCU            GUGCCCCC AUCUUUC   CUCC AA   A CUCCUG                                               
........1161......1171......1181.........1191......1201.......1211.....................1221.......1231..............1241......1251......1261........1271..........1281.......
UUUC-AGCAACUCAGAAUGCUCUACUUCUUUUUCUUUG---AGaaaggauUAAGA-UACACUCCU---GCU------------GUGCCCCC-AUCUUUC---CUCC-AA---A-CUCCUGCCUGUGUUUGUGUGGAU-AC-CCAGUCCC-AGAACCAC---ACU-GU

                                                ATTAAGA TACACTCCT   G 4                                                                                                
                                                      A TACACTCCT   GCT            GTGCCCCC ATCTTTC   CTCC AA   A CTCCTG 1                                             
                                                           ACTCCT   GCT            GTGCCCCC ATCTTTC   CTCC AA   A CTCCTG 1                                             
                                                                     CT            GTGCCCCC ATCTTTC   CTCC AA   A CTCCTG 2                                             
                                                                     CT            GTGCCCCC ATCTTTC   CTCC AA   A CTCCTG 1                                             
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCTG 25                                            
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCTGCCTG 2                                         
                                                                                      TCCCC ATCTTTC   CTCC AA   A CTCCTG 2                                             
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCTG 8                                             
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCT 2                                              
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCTG 5                                             
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCTG 10                                            
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCTG 26                                            
                                                                                      CACCC ATCTTTC   CTCC AA   A CTCCTG 1                                             
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCGG 1                                             
                                                                                      CCCAC ATCTTTC   CTCC AA   A CTCCTGCCTG 1                                         
                                                                                      CCCCC ATCTTTA   CTCC AA   A CTCCTG 1                                             
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCGG 1                                             
                                                                                      CCCCC ATCTTTC   CTCC AA   A CTCCTGCCGG 1                                         
                                                                                       CCCC ATCTTTC   CTCC AA   A CTCCTG 2                                             
                                                                                        CCC CTCTTTC   CTCC AA   A CTCCTG 2                                             
                                                                                         CC CTCTTTC   CTCC AA   A CTCCTG 3                                             
                                                                                                TTC   CTCC AA   A CTACTG 1

NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-m8) (0.34)

Conserved

miRNA Name	seed match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-122-5p	2	1206	1212	NULL	NULL	NULL	-0.260	97	-0.260	96

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-4426	2	1223	1229	NULL	NULL	NULL	-0.031	83	-0.031	76
hsa-miR-4647	2	1223	1229	NULL	NULL	NULL	-0.031	83	-0.031	77
hsa-miR-4662b	2	1223	1229	NULL	NULL	NULL	-0.072	84	-0.072	75
hsa-miR-6165	2	1210	1216	NULL	NULL	NULL	-0.122	87	-0.122	81
hsa-miR-4433b-3p	2	1207	1213	NULL	NULL	NULL	-0.142	88	-0.142	83
hsa-miR-6808-5p	2	1241	1247	NULL	NULL	NULL	-0.241	97	-0.241	96
hsa-miR-6893-5p	2	1241	1247	NULL	NULL	NULL	-0.230	96	-0.230	95
hsa-miR-940	2	1241	1247	NULL	NULL	NULL	-0.179	94	-0.179	92
hsa-miR-200a-5p	1	1200	1206	NULL	NULL	NULL	-0.010	63	-0.010	45
hsa-miR-200b-5p	1	1200	1206	NULL	NULL	NULL	-0.010	64	-0.010	46
hsa-miR-214-3p	2	1211	1217	NULL	NULL	NULL	-0.164	92	-0.164	90
hsa-miR-3619-5p	2	1211	1217	NULL	NULL	NULL	-0.185	94	-0.185	92
hsa-miR-761	2	1211	1217	NULL	NULL	NULL	-0.134	94	-0.134	93
hsa-miR-4433a-3p	2	1208	1214	NULL	NULL	NULL	-0.081	90	-0.081	86
hsa-miR-4433a-3p	2	1238	1244	NULL	NULL	NULL	-0.142	95	-0.142	93
hsa-miR-4514	2	1242	1248	NULL	NULL	NULL	-0.250	97	-0.250	96
hsa-miR-4692	2	1242	1248	NULL	NULL	NULL	-0.238	96	-0.238	95
hsa-miR-4722-5p	2	1209	1215	NULL	NULL	NULL	-0.155	92	-0.155	89
hsa-miR-4722-5p	2	1239	1245	NULL	NULL	NULL	-0.156	92	-0.156	89
hsa-miR-766-5p	3	1229	1236	NULL	NULL	NULL	-0.305	97	-0.305	96
hsa-miR-7154-3p	1	1230	1236	NULL	NULL	NULL	-0.156	91	-0.156	87
hsa-miR-765	1	1230	1236	NULL	NULL	NULL	-0.183	86	-0.183	82
hsa-miR-6894-5p	1	1230	1236	NULL	NULL	NULL	-0.175	93	-0.175	90
hsa-miR-1237-5p	1	1219	1225	NULL	NULL	NULL	-0.254	90	-0.254	87
hsa-miR-4488	1	1219	1225	NULL	NULL	NULL	-0.258	90	-0.258	88
hsa-miR-4697-5p	1	1219	1225	NULL	NULL	NULL	-0.258	90	-0.258	87
hsa-miR-6846-5p	1	1219	1225	NULL	NULL	NULL	-0.244	86	-0.244	82
hsa-miR-6848-5p	1	1219	1225	NULL	NULL	NULL	-0.244	86	-0.244	81
hsa-miR-4443	1	1231	1237	NULL	NULL	NULL	-0.151	88	-0.151	83
hsa-miR-6515-5p	1	1231	1237	NULL	NULL	NULL	-0.173	87	-0.173	82