miRTarCLIP

miR-632/4288
miR-516-3p/7162-5p
miR-2115-5p
miR-6728-3p
miR-504-3p
miR-3135b
miR-3652/4430
miR-744-3p
miR-4423-5p
miR-6501-5p

miR-130-3p/301-3p/3666/4295/45...
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 21
Read Number : 1
Read Number : 52

                                           CAGGAAGCAGA                                                                                                    
                                            AGGAAGCA                                                                                                      
                                             GGAAGCA                                                                                                      
                                                AGCAGAG                                                                                                   
                                                          GC---------------------ACUCCA                                                                   
                                                                                  CUCCAGC                                                                 
                                                                                   UCCAGCC                                                                
                                                                                            GGCAACAA                                                      
                                                                                            GGCAACA                                                       
                                                                                            GGCAACA                                                       

                                                        UUGC---------------------ACU                                                                      
                                                           C---------------------ACUCCA                                                                   
                                                  CAGAGGUUGC                     ACUCCAGCCUGGGCAAC                                                        
......7921......7931......7941......7951......7961......7971...........................7981......7991......8001......8011......8021........8031......8041......
UCCCAGCUACUUGGGAGGCUAAGGCAGGAGAACUGCUUGAACCCAGGAAGCAGAGGUUGC---------------------ACUCCAGCCUGGGCAACAAGAGCGAAACUCCGUCUCAAAAAAAUACAAAA--CUUACUGAGAGCUUACCAUGU

                                                  CAAAGGTTGC                     ACTCCAGCCTGGGCAA 1                                                       
                                                  CAGAGATTGC                     ACTCCAGCCTGGG 1                                                          
                                                  CAAAGGTTGC                     ACTCCAGCCTGGGCAAC 21                                                     
                                                   AGAGATTGC                     ACTCCA 1                                                                 
                                                   AGAGATTGC                     ACTCCAGCCTGGGC 52

NonConserved (cent.4.14) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)

Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-130a-3p	2	7971	7977	NULL	NULL	NULL	0.000	0	-0.020	38
hsa-miR-130b-3p	2	7971	7977	NULL	NULL	NULL	0.000	0	-0.020	37
hsa-miR-301a-3p	2	7971	7977	NULL	NULL	NULL	0.000	0	-0.020	37
hsa-miR-301b-3p	2	7971	7977	NULL	NULL	NULL	0.000	0	-0.020	37
hsa-miR-3666	2	7971	7977	NULL	NULL	NULL	0.000	0	-0.020	36
hsa-miR-4295	2	7971	7977	NULL	NULL	NULL	0.000	0	-0.020	39
hsa-miR-454-3p	2	7971	7977	NULL	NULL	NULL	0.000	0	-0.020	35
hsa-miR-6728-3p	2	7963	7969	NULL	NULL	NULL	0.000	0	-0.065	73
hsa-miR-3135b	2	7976	7982	NULL	NULL	NULL	0.000	0	-0.020	32
hsa-miR-2115-5p	1	7960	7966	NULL	NULL	NULL	0.000	0	-0.103	63
hsa-miR-516a-3p	3	7959	7966	NULL	NULL	NULL	0.000	0	-0.040	47
hsa-miR-516b-3p	3	7959	7966	NULL	NULL	NULL	0.000	0	-0.040	47
hsa-miR-7162-5p	3	7959	7966	NULL	NULL	NULL	0.000	0	-0.056	53
hsa-miR-504-3p	3	7973	7980	NULL	NULL	NULL	0.000	0	-0.030	52
hsa-miR-122-5p	1	7974	7980	NULL	NULL	NULL	0.000	0	-0.010	18
hsa-miR-3652	2	7977	7983	NULL	NULL	NULL	0.000	0	-0.020	26
hsa-miR-4430	2	7977	7983	NULL	NULL	NULL	0.000	0	-0.020	24
hsa-miR-6501-5p	1	7986	7992	NULL	NULL	NULL	0.000	0	-0.140	53
hsa-miR-4423-5p	1	7986	7992	NULL	NULL	NULL	0.000	0	-0.063	42
hsa-miR-744-3p	3	7986	7993	NULL	NULL	NULL	0.000	0	-0.069	60
hsa-miR-632	-5	7958	7969	NULL	NULL	NULL	NULL	NULL	NULL	NULL