miRTarCLIP

miR-4690-3p/5685
miR-6722-5p
miR-106a-3p
miR-504-3p
miR-3135b
miR-3652/4430

miR-652-3p
miR-130-3p/301-3p/3666/4295/45...
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 34

                                                                                 UGGGCUGA                                                                                                 
                                                                                            UGCGCCA                                                                                       
                                                                                                 CAU--UGCA                                                                                
                                                                                                       GCACUCCA                                                                           
                                                                                                          CUCCA----GC                                                                     
                                                                                                           UCCA----GCC                                                                    

                                                                                             GCGCCAU                                                                                      
                                                                                                   U--UGCACU                                                                              
                                                                                                        CACUCCA                                                                           
                                                                                   GGCUGAGGUUGCGCCAU  UGCACUC                                                                             
.....1931.....................................1941......1951......1961........1971......1981......1991........2001..........2011..........2021......2031.................2041.......2051......
AAGGCUG------------------------------A-GGCAGGAGGAUAGCUUGAACCCAGGAGGCAGAGGC--UGCGGUGGGCUGAGGUUGCGCCAU--UGCACUCCA----GCCUGGGCAACA----AGAGCGAAACUCCGUCUCAAAA-AAAAA----------AAAAAAAA-AAACUUCU

                                                                                   GGCTGAGATTGCGCCAT  TGCACT 1                                                                            
                                                                                   GGCTGAGATTGCGCCAT  TGCACTC 3    4

NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-m8) (NULL)
Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-130a-3p	2	1992	1998	NULL	NULL	NULL	-0.017	54	-0.020	38
hsa-miR-130b-3p	2	1992	1998	NULL	NULL	NULL	-0.017	53	-0.020	37
hsa-miR-301a-3p	2	1992	1998	NULL	NULL	NULL	-0.017	54	-0.020	37
hsa-miR-301b-3p	2	1992	1998	NULL	NULL	NULL	-0.017	54	-0.020	37
hsa-miR-3666	2	1992	1998	NULL	NULL	NULL	-0.017	53	-0.020	36
hsa-miR-4295	2	1992	1998	NULL	NULL	NULL	-0.017	55	-0.020	39
hsa-miR-454-3p	2	1992	1998	NULL	NULL	NULL	-0.017	52	-0.020	35
hsa-miR-652-3p	2	1986	1992	NULL	NULL	NULL	-0.177	86	-0.215	80
hsa-miR-4690-3p	3	1974	1981	NULL	NULL	NULL	-0.025	67	-0.030	59
hsa-miR-5685	3	1974	1981	NULL	NULL	NULL	-0.025	56	-0.030	44
hsa-miR-3135b	2	1997	2003	NULL	NULL	NULL	-0.017	54	-0.020	32
hsa-miR-504-3p	3	1994	2001	NULL	NULL	NULL	-0.025	68	-0.030	52
hsa-miR-122-5p	1	1995	2001	NULL	NULL	NULL	-0.008	43	-0.010	18
hsa-miR-6722-5p	1	1985	1991	NULL	NULL	NULL	-0.125	75	-0.151	64
hsa-miR-3652	2	1998	2004	NULL	NULL	NULL	-0.018	47	-0.021	34
hsa-miR-4430	2	1998	2004	NULL	NULL	NULL	-0.021	51	-0.025	35
hsa-miR-106a-3p	2	1990	1996	NULL	NULL	NULL	-0.017	58	-0.020	39