miRTarCLIP

miR-6075
miR-4638-5p
miR-1307-3p
miR-4642
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 35

                                                              GGGCCGA                                                                                                                               
                                                                GCCGAGA                                                                                                                             
                                                                GCCGAGA                                                                                                                             
                                                                        GAUGCCA                                                                                                                     
                                                                           GCCACUG                                                                                                                  
                                                                             CACUGCA------------------------------CUCC                                                                              
                                                                             CACUGCA                                                                                                                
                                                                              ACUGCA------------------------------C                                                                                 
                                                                                 GCA------------------------------CUCCA                                                                             
                                                                                                                  CUCCAG------C                                                                     
                                                                                                                   UCCAG------CC                                                                    

                                                                                  CA------------------------------CUCCA                                                                             
                                                                    AGAUGAUGCCACUGCA                              CUCC                                                                              
....3491.......3501......3511......3521.......................3531......3541......3551..........................................3561......3571......3581......3591.......3601................3611......
UGAGGCAAGAGA-ACCACUUGAACCUGGCAGGUGGAGGUU-----------------GCAGGGGGCCGAGAUGAUGCCACUGCA------------------------------CUCCAG------CCUGGGCAACAGAGCAAGACUCCAUCUCAAAAAAAAAAAAAA-AAAAAAAAGA----------UAAAUUA

                                                                    TGATGATGCCACTGCA                              CTCCAG      CCTGGGCAACAGAG 1                                                      
                                                                    AGATGATGCCAGTGCA                              CTCC 3      5

NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-5693	2	3544	3550	NULL	NULL	NULL	-0.011	67	-0.020	53
hsa-miR-6075	1	3531	3537	NULL	NULL	NULL	-0.129	70	-0.237	79
hsa-miR-1307-3p	1	3533	3539	NULL	NULL	NULL	-0.039	57	-0.070	54
hsa-miR-4638-5p	1	3533	3539	NULL	NULL	NULL	-0.034	52	-0.061	47
hsa-miR-6499-3p	1	3546	3552	NULL	NULL	NULL	-0.006	48	-0.010	23
hsa-miR-3135b	2	3553	3559	NULL	NULL	NULL	-0.030	66	-0.053	62
hsa-miR-504-3p	3	3550	3557	NULL	NULL	NULL	-0.017	63	-0.030	52
hsa-miR-122-5p	1	3551	3557	NULL	NULL	NULL	-0.006	39	-0.010	18
hsa-miR-3652	2	3554	3560	NULL	NULL	NULL	-0.011	42	-0.020	26
hsa-miR-4430	2	3554	3560	NULL	NULL	NULL	-0.011	40	-0.020	24
hsa-miR-143-5p	2	3547	3553	NULL	NULL	NULL	-0.011	59	-0.020	42
hsa-miR-4642	2	3541	3547	NULL	NULL	NULL	-0.049	72	-0.088	74
hsa-miR-5698	-6	3546	3557	NULL	NULL	NULL	NULL	NULL	NULL	NULL