miRTarCLIP

miR-6741-3p
miR-4638-5p
miR-1307-3p
miR-767-5p
miR-593-5p
miR-891-3p
miR-5693
miR-6499-3p
miR-4723-5p/5698/6870-5p/7111-...
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430
miR-500b-3p
miR-6879-3p
miR-6773-3p
miR-215-3p

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 2
Read Number : 5

                                            GAGCCGA                                                                                              
                                             AGCCGAGA                                                                                            
                                              GCCGAGA                                                                                            
                                                    AUGGUGC                                                                                      
                                                     UGGUGCCA                                                                                    
                                                       GUGCCAC                                                                                   
                                                         GCCACUG                                                                                 
                                                           CACUGCA                                                                               
                                                           CACUGCACUCC                                                                           
                                                            ACUGCAC                                                                              
                                                               GCACUCCA                                                                          
                                                                  CUCCAGC                                                                        
                                                                   UCCAGCC                                                                       
                                                                         CUGGGUGA                                                                
                                                                           GGGUGACA                                                              
                                                                             GUGACAGA                                                            
                                                                              UGACAGA                                                            

                                                                CACUCCA                                                                          
                                                  AGAUGGUGCCACUGCACUCCAGCCUGGGUGAC                                                               
.......1951......1961......1971......1981......1991......2001......2011......2021......2031......2041........2051..................2061......2071......
UGAGGCAGGAGAACGGCGUGAACCCGGGAGGCGGAGCUUGCAGUGAGCCGAGAUGGUGCCACUGCACUCCAGCCUGGGUGACAGAGCGAGACUCCAUCUCAA--AAAAAAA--AAAAAAA----------CAGUUUCUCAGUCCA

                                                  AGGTGGTGCCACTGCACTCCAGCCTGGGTGACAGAG 2                                                         
                                                  AGAAGGTGCCACTGCACTCCAGCCTGGGTGAC 5

NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (8mer) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-500b-3p	3	2017	2024	NULL	NULL	NULL	-0.000	41	-0.030	64
hsa-miR-5693	2	2001	2007	NULL	NULL	NULL	-0.000	45	-0.020	53
hsa-miR-6741-3p	1	1988	1994	NULL	NULL	NULL	-0.001	14	-0.116	56
hsa-miR-1307-3p	1	1990	1996	NULL	NULL	NULL	-0.002	25	-0.126	71
hsa-miR-4638-5p	3	1989	1996	NULL	NULL	NULL	-0.003	27	-0.249	81
hsa-miR-6773-3p	3	2021	2028	NULL	NULL	NULL	-0.001	37	-0.066	70
hsa-miR-215-3p	1	2022	2028	NULL	NULL	NULL	-0.000	26	-0.010	27
hsa-miR-767-5p	2	1996	2002	NULL	NULL	NULL	-0.000	17	-0.020	29
hsa-miR-6499-3p	1	2003	2009	NULL	NULL	NULL	-0.000	25	-0.010	23
hsa-miR-3135b	2	2010	2016	NULL	NULL	NULL	-0.000	27	-0.020	32
hsa-miR-504-3p	3	2007	2014	NULL	NULL	NULL	-0.001	39	-0.078	74
hsa-miR-122-5p	1	2008	2014	NULL	NULL	NULL	-0.000	18	-0.010	18
hsa-miR-593-5p	3	1997	2004	NULL	NULL	NULL	-0.003	17	-0.234	85
hsa-miR-3652	2	2011	2017	NULL	NULL	NULL	-0.000	19	-0.020	26
hsa-miR-4430	2	2011	2017	NULL	NULL	NULL	-0.000	16	-0.020	24
hsa-miR-6879-3p	3	2019	2026	NULL	NULL	NULL	-0.002	30	-0.201	81
hsa-miR-143-5p	2	2004	2010	NULL	NULL	NULL	-0.000	31	-0.020	42
hsa-miR-891a-3p	2	1999	2005	NULL	NULL	NULL	-0.000	30	-0.034	51
hsa-miR-5698	-6	2003	2014	NULL	NULL	NULL	NULL	NULL	NULL	NULL