miRTarCLIP

miR-4634
miR-504-3p
miR-3135b
miR-3652/4430
miR-3191-5p
miR-6809-3p
miR-4768-5p/6833-3p
miR-1248

miR-33-5p
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 6
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 4
Read Number : 1
Read Number : 1

                                            UCGCGCCA                                                                                                   
                                                      GCACUCC---A                                                                                      
                                                         CUCC---AGC                                                                                    
                                                          UCC---AGCC                                                                                   
                                                                           CAGAGAA                                                                     
                                                                            AGAGAAA                                                                    
                                                                            AGAGAAA                                                                    
                                                                                                          AAGAAGGA                                     

                                                  CAAUGCA                                                                                              
                                                       CACUCC---A                                                                                      
                                                  CAAUGCACUCC   AGCCUGGGCGACAGAGAAAAA             AAAAAAAAA                                            
..821.......831.......841.......851.......861.......871..........881.......891....................901.......911........921........931.........941.......
AGAAUGGCCUGAACCCGGGAGGCGGAGCUUGCAGUGAGCCGAGAUCGCGCCAAUGCACUCC---AGCCUGGGCGACAGAGAAAAA-------------AAAAAAAAAAGAAGGAGC-CCUUGAAUCUGA-GAAUCCCCCA--GUUAAGAUG

                                                  CAATGCACTCC   AGCC 1                                                                                 
                                                  CAATGCACTCC   AGCCTGGGCGACA 1                                                                        
                                                  CAATGCACTCC   AGCCTGGGCGAC 1                                                                         
                                                  CAATGCACTCC   AGCCTGGGCGACAG 2                                                                       
                                                  CAATGCACTCC   AGCCTGGGCGACAGAG 6                                                                     
                                                   AATGGACTCC   AGCCTGGGC 1                                                                            
                                                                           CAGAGAAAAA             AAAACAAA 1                                           
                                                                           CCGAGAAAAA             AAAAAAAA 1                                           
                                                                           CAGAGAAAAA             AAAAAAAAC 4                                          
                                                                                  GAA             AAAAAAAAAAGAAGGAG  1                                 
                                                                                   GA             AAAAAAAAAAGAAGGAG  1

NonConserved (8mer) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)

Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-1248	3	909	916	NULL	NULL	NULL	-0.200	95	-0.219	95
hsa-miR-3135b	2	876	882	NULL	NULL	NULL	-0.022	62	-0.024	47
hsa-miR-504-3p	3	873	880	NULL	NULL	NULL	-0.072	82	-0.078	74
hsa-miR-122-5p	1	874	880	NULL	NULL	NULL	-0.014	53	-0.015	36
hsa-miR-4634	3	863	870	NULL	NULL	NULL	-0.400	92	-0.440	87
hsa-miR-3652	2	877	883	NULL	NULL	NULL	-0.042	66	-0.046	54
hsa-miR-4430	2	877	883	NULL	NULL	NULL	-0.046	67	-0.050	55
hsa-miR-3191-5p	1	891	897	NULL	NULL	NULL	-0.029	66	-0.031	55
hsa-miR-33a-5p	2	869	875	NULL	NULL	NULL	-0.018	71	-0.020	60
hsa-miR-33b-5p	2	869	875	NULL	NULL	NULL	-0.018	71	-0.020	60
hsa-miR-4768-5p	1	892	898	NULL	NULL	NULL	-0.009	58	-0.010	38
hsa-miR-6833-3p	1	892	898	NULL	NULL	NULL	-0.009	58	-0.010	38
hsa-miR-6809-3p	1	892	898	NULL	NULL	NULL	-0.009	53	-0.010	32