miRTarCLIP

miR-2355-5p
miR-6778-3p
miR-6791-3p/6829-3p
miR-6836-3p
miR-5001-3p
miR-4772-3p
miR-6890-3p
miR-1304-3p
miR-4284
miR-6741-3p
miR-4638-5p
miR-1307-3p
miR-7641
miR-4695-3p
miR-1245/8079
miR-4765
miR-504-3p

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 5
Read Number : 3

                                                  CUGGGGA                                                                                                   
                                                     GGGAGGCA                                                                                               
                                                      GGAGGCA                                                                                               
                                                      GGAGGCA                                                                                               
                                                        AGGCAGA                                                                                             
                                                                GUUGCAG                                                                                     
                                                                   GCAGUGA                                                                                  
                                                                    CAGUGAG                                                                                 
                                                                      GUGAGCC                                                                               
                                                                        GAGCCG---A                                                                          
                                                                         AGCCG---AGA                                                                        
                                                                          GCCG---AGA                                                                        
                                                                             G---AGAUCA                                                                     
                                                                             G---AGAUCA                                                                     
                                                                                  GAUCACU                                                                   
                                                                                   AUCACUC                                                                  
                                                                                     CACUCCA                                                                

                                                                                     CACUCCA                                                                
                                                  CUGGGGAGGCAGAGGUUGCAGUGAGCCG   AGAUC                                                                      
..3591......3601......3611......3621......3631......3641......3651......3661.........3671..............3681.......3691.........3701........3711..............
CGUCUGUAGUCCCAGCUACUCAGGAGGCUGAGGCAGGAGAAUCUCUUGAACUGGGGAGGCAGAGGUUGCAGUGAGCCG---AGAUCACUCCA--------CUGCGCUC-UAGCCUGG---GCAACAGAGCAA--GAUUCCAUCUC--------AAA

                                            CTTGAACTGGGGAGGCT 1                                                                                             
                                                  CTGAGGAGGCAGAGGTTGCAGTGAGCCG   AGATC 5                                                                    
                                                                  TGCAGTGAGCCG   AGATCACT 3

NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-1245a	2	3668	3674	NULL	NULL	NULL	-0.024	69	-0.077	78
hsa-miR-8079	2	3668	3674	NULL	NULL	NULL	-0.023	71	-0.073	78
hsa-miR-6890-3p	1	3656	3662	NULL	NULL	NULL	-0.003	57	-0.010	43
hsa-miR-6741-3p	1	3661	3667	NULL	NULL	NULL	-0.052	51	-0.174	77
hsa-miR-1304-3p	2	3657	3663	NULL	NULL	NULL	-0.006	51	-0.020	38
hsa-miR-1307-3p	1	3663	3669	NULL	NULL	NULL	-0.041	58	-0.134	73
hsa-miR-4638-5p	3	3662	3669	NULL	NULL	NULL	-0.077	70	-0.263	83
hsa-miR-4772-3p	2	3653	3659	NULL	NULL	NULL	-0.013	66	-0.041	73
hsa-miR-4765	2	3669	3675	NULL	NULL	NULL	-0.006	36	-0.020	30
hsa-miR-4695-3p	1	3666	3672	NULL	NULL	NULL	-0.015	42	-0.048	43
hsa-miR-6778-3p	3	3642	3649	NULL	NULL	NULL	-0.055	73	-0.184	86
hsa-miR-6791-3p	1	3643	3649	NULL	NULL	NULL	-0.020	59	-0.064	70
hsa-miR-6829-3p	1	3643	3649	NULL	NULL	NULL	-0.012	52	-0.040	58
hsa-miR-504-3p	1	3671	3677	NULL	NULL	NULL	-0.003	45	-0.010	33
hsa-miR-122-5p	1	3671	3677	NULL	NULL	NULL	-0.003	34	-0.010	18
hsa-miR-4284	2	3659	3665	NULL	NULL	NULL	-0.006	57	-0.020	54
hsa-miR-2355-5p	2	3639	3645	NULL	NULL	NULL	-0.020	50	-0.065	61
hsa-miR-5001-3p	2	3645	3651	NULL	NULL	NULL	-0.012	45	-0.039	50
hsa-miR-7641	2	3666	3672	NULL	NULL	NULL	-0.006	53	-0.020	51
hsa-miR-6836-3p	2	3643	3649	NULL	NULL	NULL	-0.041	71	-0.137	80