miRTarCLIP

miR-4284
miR-8057
miR-564
miR-5197-5p
miR-106a-3p
miR-504-3p
miR-3135b
miR-3652/4430
miR-744-3p
miR-4423-5p
miR-6501-5p

miR-24-3p
miR-183-5p.1
miR-130-3p/301-3p/3666/4295/45...
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 48

                                             GUGAGCCA                                                                                                                         
                                               GAGCCAA                                                                                                                        
                                                            CGUGCCA                                                                                                           
                                                              UGCCAUU                                                                                                         
                                                                 CAUUGCA                                                                                                      
                                                                     GCACUCCA                                                                                                 
                                                                        CUCCAGC                                                                                               
                                                                         UCCAGCC                                                                                              
                                                                                  GGCA------ACAA                                                                              
                                                                                  GGCA------ACA                                                                               
                                                                                  GGCA------ACA                                                                               

                                              UGAGCCA                                                                                                                         
                                                             GUGCCAU                                                                                                          
                                                                   UUGCACU                                                                                                    
                                                                      CACUCCA                                                                                                 
                                                    AA   GAUCGUGCCAUUGCACUCCAGCCUGGGCA                                                                                        
...2311........2321......2331......2341......2351.........2361......2371......2381............2391..........2401...............2411........................2421......2431.......
GUUUGAGAC--GAGAAUCUCUUGAACCCGGGAGGCGGAGGUUGUGGUGAGCCAA---GAUCGUGCCAUUGCACUCCAGCCUGGGCA------ACAAGAGGG----AAACUCCGUUUC---------AAAAAAAAAA------------------GAAAAAGAAAGAAAUUG-AG

                                                    AA   GAGCGTGCCATTGCACTCCAGCCTGGGCA       48

NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)

Conserved (7mer-1a) (0.00)
Conserved (7mer-m8) (0.00)
Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-5197-5p	2	2365	2371	NULL	NULL	NULL	-0.020	48	-0.020	22
hsa-miR-130a-3p	2	2370	2376	NULL	NULL	NULL	-0.020	57	-0.020	38
hsa-miR-130b-3p	2	2370	2376	NULL	NULL	NULL	-0.020	56	-0.020	37
hsa-miR-301a-3p	2	2370	2376	NULL	NULL	NULL	-0.020	57	-0.020	37
hsa-miR-301b-3p	2	2370	2376	NULL	NULL	NULL	-0.020	57	-0.020	37
hsa-miR-3666	2	2370	2376	NULL	NULL	NULL	-0.020	56	-0.020	36
hsa-miR-4295	2	2370	2376	NULL	NULL	NULL	-0.020	58	-0.020	39
hsa-miR-454-3p	2	2370	2376	NULL	NULL	NULL	-0.020	54	-0.020	35
hsa-miR-183-5p.1	2	2364	2370	NULL	NULL	NULL	-0.101	87	-0.101	79
hsa-miR-3135b	2	2375	2381	NULL	NULL	NULL	-0.020	57	-0.020	32
hsa-miR-504-3p	3	2372	2379	NULL	NULL	NULL	-0.056	79	-0.056	68
hsa-miR-122-5p	1	2373	2379	NULL	NULL	NULL	-0.010	46	-0.010	18
hsa-miR-564	1	2363	2369	NULL	NULL	NULL	-0.179	77	-0.179	63
hsa-miR-4284	3	2351	2358	NULL	NULL	NULL	-0.030	82	-0.030	65
hsa-miR-24-3p	1	2352	2358	NULL	NULL	NULL	-0.010	54	-0.010	25
hsa-miR-3652	2	2376	2382	NULL	NULL	NULL	-0.020	50	-0.020	26
hsa-miR-4430	2	2376	2382	NULL	NULL	NULL	-0.020	48	-0.020	24
hsa-miR-6501-5p	1	2385	2391	NULL	NULL	NULL	-0.143	75	-0.143	54
hsa-miR-4423-5p	1	2385	2391	NULL	NULL	NULL	-0.066	66	-0.066	44
hsa-miR-106a-3p	2	2368	2374	NULL	NULL	NULL	-0.020	61	-0.020	39
hsa-miR-8057	1	2353	2359	NULL	NULL	NULL	-0.010	61	-0.010	44
hsa-miR-744-3p	3	2385	2392	NULL	NULL	NULL	-0.125	85	-0.125	75