miRTarCLIP

miR-4437
miR-4674
miR-378
miR-4486
miR-612/1285-3p/3187-5p/5189-5...
miR-5691/6805-3p
miR-3194-3p
miR-3650
miR-6499-3p
miR-4723-5p/5698/6870-5p/7111-...
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430
miR-6501-5p
miR-744-3p
miR-4423-5p
miR-367-5p
miR-1267

miR-326/330-5p
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 61
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 3
Read Number : 1
Read Number : 1

                                                 UGAGCCCA                                                                                              
                                                  GAGCCCA                                                                                              
                                                   AGCCCAGA                                                                                            
                                                    GCCCAGA                                                                                            
                                                    GCCCAGA                                                                                            
                                                       CAGAGCA                                                                                         
                                                       CAGAGCA                                                                                         
                                                            CACACCA                                                                                    
                                                                 CACUGCA                                                                               
                                                                 CACUGCACUCC                                                                           
                                                                  ACUGCAC                                                                              
                                                                     GCACUCCA                                                                          
                                                                        CUCCAGC                                                                        
                                                                         UCCAGCC                                                                       
                                                                                  GGCAACA                                                              
                                                                                  GGCAACA                                                              
                                                                                  GGCAACA                                                              
                                                                                   GCAACAGA                                                            
                                                                                    CAACAGA                                                            

                                                     CCCAGAG                                                                                           
                                                                      CACUCCA                                                                          
                                                       CAGAGCACACCACUGCACUCCAGCCUGGGC                                                                  
631.......641.......651............661.......671.......681.......691.......701.......711.......721.......731...................741.......751..........761.......
CUGAGACAGGAGAAUCACUUGAGCCU-----GGGAGGCAGAGGUUGCAGUGAGCCCAGAGCACACCACUGCACUCCAGCCUGGGCAACAGAGCAAGACUCUGUCUCAAAAAAAA------------AAAGAAAAGAAA---AGAAAAAAAG

                                                       TAGAGCACACCACTGCACTCCAGCCTGGG 1                                                                 
                                                       TAGAGCACACCACTGCACTC 1                                                                          
                                                       TAGAGCACACCACTGCACTCCAGCCTG 1                                                                   
                                                       NAGAGCACACCACTGCACTCCAGCCTGGGC 1                                                                
                                                       TAGAGCACACCACTGCACTCCAGCCTGGGC 61                                                               
                                                          AGCAGACCACTGCACTCCAG 1                                                                       
                                                          AGCAGACCACTGCACTCCAGCCT 1                                                                    
                                                          AGCAGACCACTGCACTCCAGCCTG 1                                                                   
                                                          AGCAGACCACTGCACTCCAGCCTGGGCAACA 1                                                            
                                                          AGCAGACCACTGCACTCCAGCCTGGGC 3                                                                
                                                          AGCAGACCACTGCACTCCAGCCTGG 1                                                                  
                                                           GCAGACCACTGCACTCCAGCCT 1

NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)

Conserved (7mer-m8) (NULL)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-326	2	679	685	NULL	NULL	NULL	-0.005	43	-0.020	39
hsa-miR-330-5p	2	679	685	NULL	NULL	NULL	-0.006	42	-0.023	47
hsa-miR-1285-3p	1	678	684	NULL	NULL	NULL	-0.014	43	-0.051	55
hsa-miR-3187-5p	1	678	684	NULL	NULL	NULL	-0.022	56	-0.084	70
hsa-miR-5189-5p	1	678	684	NULL	NULL	NULL	-0.014	45	-0.051	58
hsa-miR-612	1	678	684	NULL	NULL	NULL	-0.009	49	-0.033	64
hsa-miR-6860	1	678	684	NULL	NULL	NULL	-0.026	56	-0.100	74
hsa-miR-4486	1	678	684	NULL	NULL	NULL	-0.014	66	-0.051	77
hsa-miR-378g	3	677	684	NULL	NULL	NULL	-0.043	73	-0.166	90
hsa-miR-1267	1	710	716	NULL	NULL	NULL	-0.003	30	-0.010	18
hsa-miR-367-5p	3	709	716	NULL	NULL	NULL	-0.028	65	-0.107	76
hsa-miR-6499-3p	1	691	697	NULL	NULL	NULL	-0.003	42	-0.010	23
hsa-miR-3194-3p	1	681	687	NULL	NULL	NULL	-0.016	56	-0.060	66
hsa-miR-3135b	2	698	704	NULL	NULL	NULL	-0.039	71	-0.151	89
hsa-miR-504-3p	3	695	702	NULL	NULL	NULL	-0.060	80	-0.235	93
hsa-miR-122-5p	1	696	702	NULL	NULL	NULL	-0.030	64	-0.116	84
hsa-miR-3652	2	699	705	NULL	NULL	NULL	-0.022	53	-0.083	71
hsa-miR-4430	2	699	705	NULL	NULL	NULL	-0.020	50	-0.076	69
hsa-miR-4437	3	675	682	NULL	NULL	NULL	-0.048	53	-0.187	79
hsa-miR-3650	1	686	692	NULL	NULL	NULL	-0.018	51	-0.069	64
hsa-miR-143-5p	2	692	698	NULL	NULL	NULL	-0.013	61	-0.049	77
hsa-miR-6501-5p	1	708	714	NULL	NULL	NULL	-0.032	43	-0.124	47
hsa-miR-4423-5p	1	708	714	NULL	NULL	NULL	-0.007	31	-0.027	20
hsa-miR-5691	2	681	687	NULL	NULL	NULL	-0.005	41	-0.020	35
hsa-miR-6805-3p	2	681	687	NULL	NULL	NULL	-0.005	43	-0.020	38
hsa-miR-4674	2	676	682	NULL	NULL	NULL	-0.028	65	-0.106	77
hsa-miR-744-3p	2	708	714	NULL	NULL	NULL	-0.006	43	-0.021	39
hsa-miR-5698	-6	691	702	NULL	NULL	NULL	NULL	NULL	NULL	NULL