miRTarCLIP

miR-891-3p
miR-5693
miR-6499-3p
miR-4723-5p/5698/6870-5p/7111-...
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430
miR-744-3p
miR-4423-5p
miR-6501-5p
miR-367-5p
miR-1267
miR-3664-5p
miR-514-5p
miR-4714-5p
miR-550-3p
miR-200-5p/550-3p

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 15

                                                  GUGCCAC                                                                                          
                                                    GCCACUG                                                                                        
                                                      CACUGCA                                                                                      
                                                      CACUGCACUCC                                                                                  
                                                       ACUGCAC                                                                                     
                                                          GCACUCCA                                                                                 
                                                             CUCCAGC                                                                               
                                                              UCCAGCC                                                                              
                                                                           GGCAACA                                                                 
                                                                           GGCAACA                                                                 
                                                                           GGCAACA                                                                 
                                                                            GCAACAGA                                                               
                                                                             CAACAGA                                                               
                                                                               ACAGAGUA                                                            
                                                                                CAGAGUA                                                            
                                                                                CAGAGUA                                                            
                                                                                  GAGUAA----GA                                                     
                                                                                    GUAA----GAC                                                    

                                                           CACUCCA                                                                                 
                                                  GUGCCACUGCACUCCAGCCUG    GGCAACAGAGU                                                             
.......1521......1531......1541......1551......1561......1571......1581..........1591..........1601..............1611......1621......1631......1641......
ACCUGGGAGGUGGAGCUUGCAGUGAGCAGAGCUUGCAGUGAGACGAGCUUGUGCCACUGCACUCCAGCCUG----GGCAACAGAGUAA----GACUCAGUCUC--------AAAAAAAAAAAAAAGAGUGAAAUGCUUUUUGUUUGC

                                                  GTGCCAATGCACTCCAGCCTG    GGCAACAGAGT 1                                                           
                                                  GTGCCACTGCACTCCAGCCTG    GGCAACAGACT 1                                                           
                                                  GTGCCACTGCAATCCAGCCTG    GGCAACAGAGT 1                                                           
                                                  GTGCCACTGCACTCCAGCCTG    GGCAACAGAGT 1    5

NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-4714-5p	1	1590	1596	NULL	NULL	NULL	-0.024	54	-0.118	81
hsa-miR-514a-5p	1	1590	1596	NULL	NULL	NULL	-0.002	40	-0.010	34
hsa-miR-3664-5p	3	1589	1596	NULL	NULL	NULL	-0.019	59	-0.093	82
hsa-miR-5693	2	1566	1572	NULL	NULL	NULL	-0.004	56	-0.020	53
hsa-miR-1267	1	1587	1593	NULL	NULL	NULL	-0.009	40	-0.044	50
hsa-miR-367-5p	3	1586	1593	NULL	NULL	NULL	-0.023	62	-0.109	77
hsa-miR-550b-3p	3	1592	1599	NULL	NULL	NULL	-0.027	72	-0.131	87
hsa-miR-6499-3p	1	1568	1574	NULL	NULL	NULL	-0.002	40	-0.010	23
hsa-miR-3135b	2	1575	1581	NULL	NULL	NULL	-0.013	51	-0.060	65
hsa-miR-504-3p	3	1572	1579	NULL	NULL	NULL	-0.010	54	-0.046	65
hsa-miR-122-5p	1	1573	1579	NULL	NULL	NULL	-0.002	32	-0.010	18
hsa-miR-3652	2	1576	1582	NULL	NULL	NULL	-0.006	35	-0.027	39
hsa-miR-4430	2	1576	1582	NULL	NULL	NULL	-0.004	31	-0.020	24
hsa-miR-200c-5p	2	1594	1600	NULL	NULL	NULL	-0.024	60	-0.116	79
hsa-miR-550a-3p	2	1594	1600	NULL	NULL	NULL	-0.033	67	-0.163	88
hsa-miR-143-5p	2	1569	1575	NULL	NULL	NULL	-0.004	45	-0.020	42
hsa-miR-891a-3p	2	1564	1570	NULL	NULL	NULL	-0.012	51	-0.055	61
hsa-miR-6501-5p	1	1585	1591	NULL	NULL	NULL	-0.030	41	-0.147	56
hsa-miR-4423-5p	1	1585	1591	NULL	NULL	NULL	-0.019	43	-0.090	55
hsa-miR-744-3p	2	1585	1591	NULL	NULL	NULL	-0.012	50	-0.056	56
hsa-miR-5698	-6	1568	1579	NULL	NULL	NULL	NULL	NULL	NULL	NULL