miRTarCLIP

miR-6787-3p
miR-1285-5p
miR-891-3p
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 2
Read Number : 1
Read Number : 39
Read Number : 1
Read Number : 26
Read Number : 1
Read Number : 1
Read Number : 27

                                            AGCUGAGA                                                                                         
                                               UGAGAUA                                                                                       
                                                      GUGCCAC                                                                                
                                                        GCCACUG                                                                              
                                                                                                                                             
                                                          CACUGCA                                                                            
                                                           ACUGCAC                                                                           
                                                              GCACUCCA                                                                       
                                                                 CUCCAGC                                                                     
                                                                  UCCAGCC                                                                    

                                                               CACUCCA                                                                       
                                                  GAUAGUGCCACUGCACUCCAGCCUGGGCGAC                                                            
.......1961......1971......1981......1991......2001......2011......2021......2031......2041......2051............2061..........2071......2081......
GAGGCAGGAGAAUGGCAUGAACCUGGGAGGCGGAGCUUACAGUGAGCUGAGAUAGUGCCACUGCACUCCAGCCUGGGCGACAGAGCGAGACUCCAUCUCAAAA-AAA-----AAAAA----UAUUUUUGACUCUUAACAGU

                                                  GAAAGTGCCACTGCACTCCAGCCTGGG 1                                                              
                                                  GAAAGTGCCACTGCACTCCAGCC 2                                                                  
                                                  GCTAGTGCCACTGCACTCCAGCCTGGGCGAC 1                                                          
                                                  GAAAGTGCCACTGCACTCCAGCCTGGGC 39                                                            
                                                   ATAGGGCCACTGCACTCCAGCCTGGGCGA 1                                                           
                                                   ATAGGGCCACTGCACTCCAGCCTGGGCGAC 26                                                         
                                                     AGTGNCACTGCACTCCAGCCTGGGC 1                                                             
                                                     AGTGNCACTGCACTCCAGCC 1                                                                  
                                                     AGTGGCACTGCACTCCAGCCTGGGC 27

NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-1285-5p	1	2001	2007	NULL	NULL	NULL	-0.001	60	-0.010	57
hsa-miR-5693	2	2010	2016	NULL	NULL	NULL	-0.002	52	-0.020	53
hsa-miR-6787-3p	3	1998	2005	NULL	NULL	NULL	-0.005	53	-0.046	73
hsa-miR-6499-3p	1	2012	2018	NULL	NULL	NULL	-0.001	35	-0.010	23
hsa-miR-3135b	2	2019	2025	NULL	NULL	NULL	-0.003	39	-0.034	54
hsa-miR-504-3p	3	2016	2023	NULL	NULL	NULL	-0.008	52	-0.083	75
hsa-miR-122-5p	1	2017	2023	NULL	NULL	NULL	-0.001	27	-0.010	18
hsa-miR-3652	2	2020	2026	NULL	NULL	NULL	-0.002	28	-0.020	26
hsa-miR-4430	2	2020	2026	NULL	NULL	NULL	-0.002	26	-0.020	24
hsa-miR-143-5p	2	2013	2019	NULL	NULL	NULL	-0.002	40	-0.020	42
hsa-miR-891a-3p	2	2008	2014	NULL	NULL	NULL	-0.009	47	-0.097	74
hsa-miR-183-5p.2	2	2007	2013	NULL	NULL	NULL	-0.007	37	-0.074	65
hsa-miR-5698	-6	2012	2023	NULL	NULL	NULL	NULL	NULL	NULL	NULL