miRTarCLIP

miR-203-5p
miR-1273-5p
miR-4318
miR-943
miR-6076/6797-3p
miR-3622b-5p
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 11

                                            GAACCAC-----A                                                                                                                                                              
                                             AACCAC-----A                                                                                                                                                              
                                               CCAC-----AGU                                                                                                                                                            
                                                 AC-----AGUCA                                                                                                                                                          
                                                         GUCAUGC                                                                                                                                                       
                                                           CAUGCCA                                                                                                                                                     
                                                              GCCA--C------UG                                                                                                                                          
                                                                CA--C------UGCACUCC                                                                                                                                    
                                                                CA--C------UGCA                                                                                                                                        
                                                                 A--C------UGCAC                                                                                                                                       
                                                                            GCACUCC----A                                                                                                                               
                                                                               CUCC----AGC                                                                                                                             
                                                                                UCC----AGCC                                                                                                                            

                                                                             CACUCC----A                                                                                                                               
                                                  C     AGUCAUGCCA  C      UGCACUCC    AGCCUGGGC                                                                                                                       
.....2761......2771......2781......2791......2801...........2811..............2821..........2831...........................................................2841......2851..........2861.............2871........2881.......
CUGUAAAAAAUAAAAAAUUAGCUGGGUAUGGUGGCACGUGCAGUGAACCAC-----AGUCAUGCCA--C------UGCACUCC----AGCCUGGGCGA-----------------------------------------------------CACAGUGAGGCCCUGUCU---CA-AAAAA-AA-UA-----AAAUGAC--AAACAUUUGC-AUCA

                                                  C     AGTGATGCCA  C      TGCACTCC    A 1                                                                                                                             
                                                  C     AGTGATGCCA  C      TGCACTCC    AGC 1                                                                                                                           
                                                  C     AGTGATGCCA  C      TGCACTCC    AG 1                                                                                                                            
                                                  C     AGTGATGCCA  C      TGCACTCC    AGCCTGG 1                                                                                                                       
                                                  C     AGTGATGCCA  C      TGCACTCC    AGCCTGGG 1                                                                                                                      
                                                  C     AGTGATGCCA  C      TGCACTCC    AGCCTGGGC 1                                                     1

NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-4318	2	2803	2809	NULL	NULL	NULL	-0.000	34	-0.085	72
hsa-miR-5693	2	2813	2819	NULL	NULL	NULL	-0.000	43	-0.026	71
hsa-miR-6499-3p	1	2815	2821	NULL	NULL	NULL	-0.000	25	-0.010	23
hsa-miR-6076	2	2808	2814	NULL	NULL	NULL	-0.001	36	-0.092	78
hsa-miR-6797-3p	2	2808	2814	NULL	NULL	NULL	-0.001	37	-0.102	82
hsa-miR-3135b	2	2822	2828	NULL	NULL	NULL	-0.000	29	-0.076	71
hsa-miR-504-3p	3	2819	2826	NULL	NULL	NULL	-0.001	37	-0.101	78
hsa-miR-122-5p	1	2820	2826	NULL	NULL	NULL	-0.000	18	-0.010	18
hsa-miR-3622b-5p	1	2810	2816	NULL	NULL	NULL	-0.000	26	-0.063	54
hsa-miR-3652	2	2823	2829	NULL	NULL	NULL	-0.000	20	-0.063	63
hsa-miR-4430	2	2823	2829	NULL	NULL	NULL	-0.000	18	-0.056	59
hsa-miR-143-5p	2	2816	2822	NULL	NULL	NULL	-0.000	29	-0.020	42
hsa-miR-203a-5p	3	2800	2807	NULL	NULL	NULL	-0.001	24	-0.155	82
hsa-miR-1273g-5p	1	2801	2807	NULL	NULL	NULL	-0.000	27	-0.022	43
hsa-miR-943	2	2805	2811	NULL	NULL	NULL	-0.000	28	-0.054	65
hsa-miR-5698	-6	2815	2826	NULL	NULL	NULL	NULL	NULL	NULL	NULL