miRTarCLIP

miR-4485-5p
miR-2276-3p
miR-6890-3p
miR-1304-3p
miR-6736-3p
miR-6787-3p
miR-566
miR-6789-3p
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 116
Read Number : 1

                                                 AGGCGGA                                                                                                                        
                                                         CUUGCAG                                                                                                                
                                                            GCAGUGA                                                                                                             
                                                             CAGUGAG                                                                                                            
                                                                 GAG-CUGA                                                                                                       
                                                                  AG-CUGAGA                                                                                                     
                                                                            GGCGCCA                                                                                             
                                                                            GGCGCCA                                                                                             
                                                                               GCCACUG                                                                                          
                                                                                 CACUGCACUCC                                                                                    
                                                                                 CACUGCA                                                                                        
                                                                                  ACUGCAC                                                                                       
                                                                                     GCACUCCA                                                                                   
                                                                                        CUCCAGC                                                                                 
                                                                                         UCCAGCC                                                                                

                                                                                      CACUCCA                                                                                   
                                                       AGCUUGCAGUGAG CUGAGAUGGCGCCACUGCACUCC                                                                                    
...1381.........1391......1401......1411........1421......1431.......1441......1451......1461......1471.......1481....................1491.........1501...........................
CAGCUACU---CGGGAGGCUGAGGCAGGAGAAUGGCGUGAACCUG--GGAGGCGGAGCUUGCAGUGAG-CUGAGAUGGCGCCACUGCACUCCAGCCUGGGCCACA-GAGUGCG--ACUCCA-----U-------CUC---AAAAAAAAAAA---------------------AAAA

                                                       AGCTTGCAGTGAG CTGAGATGGCGCCACTACACTCC 116                                                                                
                                                                TGAG CTGAGATGGCGCCACTACACTCCAGCCTGGGC 1

NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-6890-3p	1	1433	1439	NULL	NULL	NULL	-0.001	49	-0.010	43
hsa-miR-6736-3p	1	1438	1444	NULL	NULL	NULL	-0.001	36	-0.010	33
hsa-miR-5693	2	1451	1457	NULL	NULL	NULL	-0.001	50	-0.020	53
hsa-miR-4485-5p	1	1422	1428	NULL	NULL	NULL	-0.008	35	-0.157	70
hsa-miR-1304-3p	2	1434	1440	NULL	NULL	NULL	-0.001	38	-0.020	38
hsa-miR-6787-3p	3	1439	1446	NULL	NULL	NULL	-0.002	48	-0.030	64
hsa-miR-2276-3p	2	1430	1436	NULL	NULL	NULL	-0.001	45	-0.020	50
hsa-miR-6499-3p	1	1453	1459	NULL	NULL	NULL	-0.001	32	-0.010	23
hsa-miR-3135b	2	1460	1466	NULL	NULL	NULL	-0.001	33	-0.021	45
hsa-miR-504-3p	3	1457	1464	NULL	NULL	NULL	-0.003	44	-0.054	68
hsa-miR-122-5p	1	1458	1464	NULL	NULL	NULL	-0.002	31	-0.036	54
hsa-miR-6789-3p	1	1448	1454	NULL	NULL	NULL	-0.009	25	-0.175	66
hsa-miR-566	1	1448	1454	NULL	NULL	NULL	-0.007	26	-0.136	70
hsa-miR-3652	2	1461	1467	NULL	NULL	NULL	-0.001	25	-0.020	26
hsa-miR-4430	2	1461	1467	NULL	NULL	NULL	-0.001	23	-0.020	24
hsa-miR-143-5p	2	1454	1460	NULL	NULL	NULL	-0.001	38	-0.020	42
hsa-miR-5698	-6	1453	1464	NULL	NULL	NULL	NULL	NULL	NULL	NULL