miRTarCLIP

miR-3152-5p
miR-4774-3p
miR-1251-3p
miR-2276-3p
miR-6890-3p
miR-1304-3p
miR-6736-3p
miR-6787-3p
miR-6722-5p
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430

miR-216a-5p
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 44

                                              G---AGGCAAA                                                                                                                    
                                                  AGGCAAA                                                                                                                    
                                                    GCAAAGC                                                                                                                  
                                                          CUUGC-----------AG                                                                                                 
                                                             GC-----------AGUGA                                                                                              
                                                              C-----------AGUGAG                                                                                             
                                                                             GAGCUGA                                                                                         
                                                                              AGCUGAGA                                                                                       
                                                                                       UGCGCCA                                                                               
                                                                                          GCCACUG                                                                            
                                                                                            CACUGCACUCC                                                                      
                                                                                            CACUGCA                                                                          
                                                                                             ACUGCAC                                                                         
                                                                                                GCACUCCA                                                                     
                                                                                                   CUCCAGC                                                                   
                                                                                                    UCCAGCC                                                                  

                                                                                 UGAGAUU                                                                                     
                                                                                                 CACUCCA                                                                     
                                                        AGCUUGC           AGUGAGCUGAGAUUGCGCCACUGCACUCC                                                                      
.3901........3911......3921......3931.......3941.........3951.................3961......3971......3981......3991...........4001......4011......................4021..........
CAGCA--ACUCGAGAGGCUGAGGCAGGAGAAUGGC-GUGAACCCGGG---AGGCAAAGCUUGC-----------AGUGAGCUGAGAUUGCGCCACUGCACUCCAGCCUGGGC-----AACAGAGCGAGACUCCGUCUC----------------ACAAAAAAA---AAA-AAA

                                                        AGCTTGC           AGTGAGCTGAGATTGCGCCACTGCACT 1                                                                      
                                                        AGCTTGC           AGTGAGCTGAGATTGCGCCACTGCACTG 1                                                                     
                                                        AGCTTGC           AGTGAGCTGAGATTGCGCCACTGCACTC 1                                                                     
                                                        AGCTTGC           AGTGAGCTGAGATTGCGCCACTGCACTCG 44

NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-216a-5p	2	3964	3970	NULL	NULL	NULL	-0.001	27	-0.020	27
hsa-miR-6890-3p	1	3955	3961	NULL	NULL	NULL	-0.001	50	-0.010	43
hsa-miR-6736-3p	1	3960	3966	NULL	NULL	NULL	-0.001	37	-0.010	33
hsa-miR-5693	2	3973	3979	NULL	NULL	NULL	-0.001	50	-0.020	53
hsa-miR-1304-3p	2	3956	3962	NULL	NULL	NULL	-0.001	38	-0.020	38
hsa-miR-6787-3p	3	3961	3968	NULL	NULL	NULL	-0.002	48	-0.030	64
hsa-miR-2276-3p	2	3952	3958	NULL	NULL	NULL	-0.001	45	-0.020	50
hsa-miR-6499-3p	1	3975	3981	NULL	NULL	NULL	-0.001	33	-0.010	23
hsa-miR-3135b	2	3982	3988	NULL	NULL	NULL	-0.001	33	-0.020	32
hsa-miR-1251-3p	2	3946	3952	NULL	NULL	NULL	-0.002	41	-0.030	59
hsa-miR-504-3p	3	3979	3986	NULL	NULL	NULL	-0.002	41	-0.030	52
hsa-miR-122-5p	1	3980	3986	NULL	NULL	NULL	-0.001	25	-0.010	18
hsa-miR-6722-5p	1	3970	3976	NULL	NULL	NULL	-0.006	21	-0.109	53
hsa-miR-3652	2	3983	3989	NULL	NULL	NULL	-0.001	25	-0.020	26
hsa-miR-4430	2	3983	3989	NULL	NULL	NULL	-0.001	23	-0.020	24
hsa-miR-143-5p	2	3976	3982	NULL	NULL	NULL	-0.001	38	-0.020	42
hsa-miR-4774-3p	1	3944	3950	NULL	NULL	NULL	-0.002	25	-0.039	38
hsa-miR-3152-5p	3	3943	3950	NULL	NULL	NULL	-0.009	44	-0.161	84
hsa-miR-5698	-6	3975	3986	NULL	NULL	NULL	NULL	NULL	NULL	NULL