miRTarCLIP

miR-5001-3p
miR-3194-3p
miR-6796-3p
miR-2276-3p
miR-6890-3p
miR-1304-3p
miR-6736-3p
miR-6787-3p
miR-891-3p
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430

miR-216a-5p
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 36

                                                            A------GGCAGA                                                                                       
                                                                    GCAGAGC                                                                                     
                                                                      AGAGCUU                                                                                   
                                                                          CUUGCAG                                                                               
                                                                             GCAGUGA                                                                            
                                                                              CAGUGAG                                                                           
                                                                                  GAGCUGA                                                                       
                                                                                   AGCUGAGA                                                                     
                                                                                             GUGCCAC                                                            
                                                                                               GCCACUG                                                          
                                                                                                 CACUGCACUCC                                                    
                                                                                                 CACUGCA                                                        
                                                                                                  ACUGCAC                                                       
                                                                                                     GCACUCCA                                                   
                                                                                                        CUCCAGC                                                 
                                                                                                         UCCAGCC                                                

                                                                                      UGAGAUU                                                                   
                                                                                                      CACUCCA                                                   
                                                                        AGCUUGCAGUGAGCUGAGAUUGUGCCACUGCACUCC                                                    
1391..................1401......1411..........1421......1431............1441......1451......1461......1471......1481......1491........1501.........1511........1521......
CA------------GCUACUCGGGAGGCUGAGGCAGGAGAA----UGACCUGAACCUGGGA------GGCAGAGCUUGCAGUGAGCUGAGAUUGUGCCACUGCACUCCAGCCUGGGUGACAGA--GCAAGACUCCGUCUC---AAAAAA--AAAAAAAAA

                                                                        AGCTTGCAGTGAGCTGAGATTGTGCCACTACACTCC 1                                                  
                                                                        AGCTTGCGGTGAGCTGAGATTGTGCCACTGCACTCC 1                                                  
                                                                        AGCTTGCAGTGAGCTGAGATTGTGCCACTNCACTCC 1                                                  
                                                                        AGCTTGCAGTGAGCTGAGATTGTGCCACTGCACTCC 36

NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-m8) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-6796-3p	2	1439	1445	NULL	NULL	NULL	-0.017	63	-0.020	47
hsa-miR-216a-5p	2	1455	1461	NULL	NULL	NULL	-0.017	51	-0.020	27
hsa-miR-6890-3p	1	1446	1452	NULL	NULL	NULL	-0.008	64	-0.010	43
hsa-miR-6736-3p	1	1451	1457	NULL	NULL	NULL	-0.008	50	-0.010	33
hsa-miR-5693	2	1464	1470	NULL	NULL	NULL	-0.017	71	-0.020	53
hsa-miR-1304-3p	2	1447	1453	NULL	NULL	NULL	-0.017	64	-0.020	38
hsa-miR-6787-3p	3	1452	1459	NULL	NULL	NULL	-0.025	73	-0.030	64
hsa-miR-2276-3p	2	1443	1449	NULL	NULL	NULL	-0.017	64	-0.020	50
hsa-miR-6499-3p	1	1466	1472	NULL	NULL	NULL	-0.008	53	-0.010	23
hsa-miR-3194-3p	2	1437	1443	NULL	NULL	NULL	-0.085	82	-0.103	78
hsa-miR-3135b	2	1473	1479	NULL	NULL	NULL	-0.017	54	-0.020	32
hsa-miR-504-3p	3	1470	1477	NULL	NULL	NULL	-0.025	68	-0.030	52
hsa-miR-122-5p	1	1471	1477	NULL	NULL	NULL	-0.008	43	-0.010	18
hsa-miR-3652	2	1474	1480	NULL	NULL	NULL	-0.017	47	-0.020	26
hsa-miR-4430	2	1474	1480	NULL	NULL	NULL	-0.017	45	-0.020	24
hsa-miR-143-5p	2	1467	1473	NULL	NULL	NULL	-0.017	64	-0.020	42
hsa-miR-891a-3p	2	1462	1468	NULL	NULL	NULL	-0.024	60	-0.029	48
hsa-miR-5001-3p	2	1435	1441	NULL	NULL	NULL	-0.017	49	-0.020	27
hsa-miR-5698	-6	1466	1477	NULL	NULL	NULL	NULL	NULL	NULL	NULL