miRTarCLIP

miR-3655
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430
miR-6812-3p

miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 2
Read Number : 26
Read Number : 1

                                            GACAAGA                                                                                
                                                         CACUGCACUCC                                                               
                                                         CACUGCA                                                                   
                                                          ACUGCAC                                                                  
                                                             GCACUCCA                                                              
                                                                CUCCAGC                                                            
                                                                 UCCAGCC                                                           
                                                                                AGAGCGA                                            

                                                              CACUCCA                                                              
                                                  AUUGCACCACUGCACUCCAGCCUGGGCGACAGAGCG                                             
1051......1061......1071......1081......1091......1101......1111......1121......1131......1141......1151......1161......1171......1181......
AGGCAGGAGAAUGGCAUGAACCUGGGAGGUGGAGCUUGCAGUGAGACAAGAUUGCACCACUGCACUCCAGCCUGGGCGACAGAGCGACUCUGUCUCAAAAAGAAGAAGAACCAACCAUGCAUACCAAAAUC

                                             AAAAGATTGCACCACTGCAC 2                                                                
                                                  ATTGGACCACTGCACTCCAGCCTGGGCGACAGAGCG 26                                          
                                                                                 AAGCGACTCTGTCTCAAA 1

NonConserved (7mer-1a) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)

Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-6812-3p	1	1131	1137	NULL	NULL	NULL	-0.000	4	-0.077	41
hsa-miR-3655	1	1095	1101	NULL	NULL	NULL	-0.000	37	-0.044	70
hsa-miR-6499-3p	1	1108	1114	NULL	NULL	NULL	0.000	0	-0.010	23
hsa-miR-3135b	2	1115	1121	NULL	NULL	NULL	-0.000	25	-0.086	74
hsa-miR-504-3p	3	1112	1119	NULL	NULL	NULL	-0.000	34	-0.098	77
hsa-miR-122-5p	1	1113	1119	NULL	NULL	NULL	0.000	0	-0.018	39
hsa-miR-3652	2	1116	1122	NULL	NULL	NULL	-0.000	16	-0.044	52
hsa-miR-4430	2	1116	1122	NULL	NULL	NULL	-0.000	14	-0.037	46
hsa-miR-143-5p	2	1109	1115	NULL	NULL	NULL	0.000	0	-0.020	42
hsa-miR-5698	-6	1108	1119	NULL	NULL	NULL	NULL	NULL	NULL	NULL