miRTarCLIP

miR-513a-5p
miR-5693
miR-4723-5p/5698/6870-5p/7111-...
miR-6499-3p
miR-143-5p
miR-504-3p
miR-3135b
miR-3652/4430

miR-27-3p
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 1
Read Number : 4

                                            CCUGUGAA                                                                                                                
                                                      GCCACUG                                                                                                       
                                                        CACUGCACUCC                                                                                                 
                                                        CACUGCA                                                                                                     
                                                         ACUGCAC                                                                                                    
                                                            GCACUCCA                                                                                                
                                                               CUCCAGC                                                                                              
                                                                UCCAGCC                                                                                             

                                             CUGUGAA                                                                                                                
                                                             CACUCCA                                                                                                
                                                  AAUAGCCACUGCACUCCAG                                                                                               
..3841......3851......3861......3871......3881......3891......3901......3911......3921...............3931......3941..............................3951......3961......
UGCUUGGGCCCAGGAGUUUGAGAUUUCAGCAUGCUAUGAUUGCUCCUGUGAAUAGCCACUGCACUCCAGCCUGGGCAACAUAAC---------AAGACCUCAUUUCGUAAAAAA------------------------CACAUAAUACUGAUUUUUGUGCAUUG

                                            CCTGTGAATAGCCACTG 1                                                                                                     
                                                 AAATAGCCACTGCACTCCAGCCTGGGCAA 1                                                                                    
                                                  AATAGCCACTGCACTCCA 1                                                                                              
                                                  AATAGCCACTGCACTCCAGCCTGGGCAACA 1                                                                                  
                                                  AATAGCCACTGCACTCCAG 4

NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (cent.5.15) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)

Conserved (7mer-1a) (0.00)
Conserved (7mer-1a) (0.00)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-5693	2	3893	3899	NULL	NULL	NULL	-0.038	83	-0.076	84
hsa-miR-6499-3p	1	3895	3901	NULL	NULL	NULL	-0.005	47	-0.010	23
hsa-miR-3135b	2	3902	3908	NULL	NULL	NULL	-0.031	67	-0.060	65
hsa-miR-504-3p	3	3899	3906	NULL	NULL	NULL	-0.045	76	-0.088	76
hsa-miR-122-5p	1	3900	3906	NULL	NULL	NULL	-0.031	64	-0.060	68
hsa-miR-3652	2	3903	3909	NULL	NULL	NULL	-0.021	53	-0.042	51
hsa-miR-4430	2	3903	3909	NULL	NULL	NULL	-0.018	46	-0.035	44
hsa-miR-143-5p	2	3896	3902	NULL	NULL	NULL	-0.010	58	-0.020	42
hsa-miR-513a-5p	3	3883	3890	NULL	NULL	NULL	-0.043	74	-0.086	78
hsa-miR-27a-3p	1	3884	3890	NULL	NULL	NULL	-0.005	44	-0.010	32
hsa-miR-27b-3p	1	3884	3890	NULL	NULL	NULL	-0.005	44	-0.010	32
hsa-miR-5698	-6	3895	3906	NULL	NULL	NULL	NULL	NULL	NULL	NULL