miRTarCLIP

miR-513a-5p
miR-7111-3p
miR-3183/4723-3p/6769-3p
miR-4279
miR-629-3p
miR-130-5p
miR-504-3p
miR-4254

miR-342-3p
miR-122-5p
Clusters
Ruler
3'UTR(9606)
Reads Info
Read Number : 1
Read Number : 1
Read Number : 2
Read Number : 3
Read Number : 3
Read Number : 4

                                                                                                              ccuguga                                                                                                      
                                                                                                                   gagag--------ga                                                                                         
                                                                                                                   gagag--------ga                                                                                         
                                                                                                                     gag--------gagaa                                                                                      
                                                                                                                       g--------gagaa---a                                                                                  
                                                                                                                                  gaa---agag                                                                               
                                                                                                                                              cacucca                                                                      
                                                                                                                                                cuccag---ga                                                                

                                                                                                                ugugaga                                                                                                    
                                                                                                                                              cacucca                                                                      
                                                                                                                    agag        gagaa   agaguccac                                                                          
................381.......391..............401.......................................................411..........421...............431..........441..........451........461..........471.......481..........491........501.......
---gaugcc-----aaaggacagcccucag-------caguuggaa---cuc---------------------------------------------uugaguggg---cccugugagag--------gagaa---agaguccacuccag---gacccu-uuucccgaag---aggacuacagcuccacggag---gggucugggggcagaa-uuaccu

                                                                                                                    AAAG        GAGAA   AGAGTCCA 1                                                                         
                                                                                                                    AAAG        GAGAA   AGAGTCCACT 1                                                                       
                                                                                                                    AAAG        GAGAA   AGAGTCCACTC 2                                                                      
                                                                                                                    AAAG        GAGAA   AGAGTC 3                                                                           
                                                                                                                    AAAG        GAGAA   AGAGTCC 3                                                                          
                                                                                                                    AAAG        GAGAA   AGAGTCCAC 4

NonConserved (7mer-m8) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (7mer-m8) (NULL)
NonConserved (7mer-1a) (NULL)
NonConserved (8mer) (NULL)

Conserved (7mer-1a) (NULL)
Conserved (7mer-1a) (NULL)

Conserved

miRNA Name

seed match

mirna start

mirna end

3' pairing contribution

local AU contribution

position contribution

TA contribution

SPS contribution

context+ score

context+ score percentile

Nonconserved

miRNA Name	seed_match	mirna start	mirna end	3' pairing contribution	local AU contribution	position contribution	TA contribution	SPS contribution	context+ score	context+ score percentile
hsa-miR-3183	1	422	428	NULL	NULL	NULL	-0.005	50	-0.010	36
hsa-miR-4723-3p	1	422	428	NULL	NULL	NULL	-0.012	49	-0.026	48
hsa-miR-6769b-3p	1	422	428	NULL	NULL	NULL	-0.028	64	-0.062	67
hsa-miR-4254	3	440	447	NULL	NULL	NULL	-0.014	55	-0.030	60
hsa-miR-342-3p	1	419	425	NULL	NULL	NULL	-0.005	52	-0.010	39
hsa-miR-130b-5p	2	429	435	NULL	NULL	NULL	-0.018	68	-0.040	71
hsa-miR-504-3p	1	438	444	NULL	NULL	NULL	-0.005	47	-0.010	33
hsa-miR-122-5p	1	438	444	NULL	NULL	NULL	-0.005	37	-0.010	18
hsa-miR-513a-5p	2	417	423	NULL	NULL	NULL	-0.010	50	-0.021	50
hsa-miR-7111-3p	2	422	428	NULL	NULL	NULL	-0.032	69	-0.070	71
hsa-miR-4279	3	424	431	NULL	NULL	NULL	-0.088	86	-0.198	93
hsa-miR-629-3p	1	426	432	NULL	NULL	NULL	-0.005	58	-0.010	45