miRTarBase - #MIRT706705 -
pre-miRNA Information
pre-miRNA hsa-mir-122   
Genomic Coordinates chr18: 58451074 - 58451158
Synonyms MIR122A, MIRN122, MIRN122A, hsa-mir-122, miRNA122, miRNA122A, MIR122
Description Homo sapiens miR-122 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-122-5p
Sequence 15| UGGAGUGUGACAAUGGUGUUUG |36
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 18 + 58451091 29233923 MiREDiBase
C-to-U 11 18 + 58451098 28550310 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1258166649 1 dbSNP
rs1426570658 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles

Circulating MicroRNA Expression Profiling
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol GPR155   
Synonyms DEP.7, DEPDC3, PGR22
Description G protein-coupled receptor 155
Transcript NM_001033045   
Other Transcripts NM_152529   
Expression
Putative miRNA Targets on GPR155
3'UTR of GPR155
(miRNA target sites are highlighted)
>GPR155|NM_001033045|3'UTR
   1 ATTATGCAGGGGAGAACCCTACATGGAATCATATTCTAGCCGCGTATTCATTAGTTTTTAGCTGGGTGACCTTGGGCAAG
  81 TTAACAGAGGCAACCTCTCTGAGCCTCAGTTGTCTCTTCTGTAAAATGTGAAAAGATGTGCTCCCACCACATGCGCAGGG
 161 TCTGTGATTTTACATGTATGTAAAACACATAGGAAGCTGACTTAGGAAAAAGAGAAAACCAAATTAAAGTTCTGATAATG
 241 AATATAATATAGTCATCCTTTAGTATCCAAGGGGATTGGTTCCAGGACTCCTGAAGATCCCAAAATCTGAGGATACTCAA
 321 GTCCCTTATATAAAATGGTGTAGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGTACTTTGGGAGGCCGAGTCAGGTG
 401 GATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTACTATAAAATACAAAAAATTA
 481 GTTGGGTGTGGTGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAATCTGGGAGGCAG
 561 AGGTTGCTGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGAGCAACAGAGCAAGACTCTATCTCAAAAATAAAATAAA
 641 ATAAAATAAAATAATTAATAAAATGGTGTAGTATTTGCATATAACCTATGCACATTCTCCCATATAGTTTAATCATCTTT
 721 AGATACTTATAATGCCTAATACAATGTAAATGCTATGTAAATAGTTGTTGTTATACTGTATTGTTTAGGGAATAACAATA
 801 AGAAAAACAGTCTGTACATGTTCACTACAGATGCAACCATTGTTAAGCCTGACTACATCTTTTTATCTGCGGTTGATTGA
 881 ATCTATGGATGTGGAACCTGTGCATATGGAGGGTCAACTGTACTATAAATAATACGAATATGCCAACATTATATAATCAT
 961 TGCTTTCTGCAACTGTTTACTATAATTTCAAAATTAATATCCTATTAACTGTTCCTATAAATTATCAAATTTGGCAAGTG
1041 TATTACTAGCAGGAGATGGACCTTAAATTATGACAACTTTATATTTTTTGATAGCATCTCTTGAAAAAGAATTTTAATGA
1121 TTCTAATAAGAGGTTCTTTTTCTTTTTTCCATTTCCTTGACAAATAGTACTCATTTAAAAACTAGAGGGCTAGGCTTAGT
1201 GGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCTGAGGCGGGCAGATCGCTTGAGGTCAGGAGTTCAAGACCAGCCCGG
1281 GCAACGTGGTGAAACCCGGTCTGTACTAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAGAATACCCAGGTGTGGTAG
1361 TGCATGCCTGTAGTCCCAGCTACTTTGGAGACTGAGGTGGGAGTACCCCTTGAGCCTGGGAGGCGCAGGTTGCAGTGAAC
1441 CAAGATCACATCACTGCACTTCAACCTGGGTGACAGAGCAAGACCCTGTCTCAAAAACAAAAAACAAGCAAAAAAAACCT
1521 AGAGGCACTATTTTTTTTTAAAGTTTGTCTTTTCTTTTCTACCCAAATTACTAATCTATGCCATTAAGGAAAGGAATAAG
1601 AACCTCCATATGTATTATTATCTCCACAGTCCTGCAGAAGTACAATCTGATCTTTAACTTTCATGCTACAAATAATAATT
1681 TGAGTAGATTAATTTGAATTTTATCAACAAAATTATTGCCATATGATGTATCATTTCTGTGTTTGAACAAAGCATCGTAA
1761 TGCAGGATAACTTCTACTTTATTCCCTGTAGTTAAAAAAAAAAAAACTATATAGTTCAAGCCAATATTTAAAAATTCTAA
1841 ACCTAGGCTGGGCATGGTGACTCATACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGAATTGCTTCAGCCCAGG
1921 AGTTCGAGACCAGCCTGGCCAATGTGGTGAAACCCCATCTCTACTAAAAAAAAAAAAAAAAAAAAAAATTAGCCAGGTGT
2001 GGTGGTGTGCACCTGTAATCCCAGCTACCCAGGAGGCTGAGGCAGGAAAATTGCTTGAAACCAGGAGGCAGAGGTTGCAG
2081 TGAGCTGAGATCGTGCCACTGCACTCCAGCCTGAGTGTCAGAGTGAGACTCTGTCTCAGAAAAAAAAAAAAAAATTCTAA
2161 AGATTACATTTAGAATTTAGTCTTTTTAAAGTGTCCATGTATAAAAATATATAATTTTTAAAATTACTAAATGTTGCCTT
2241 TTCTCTTAGTCTAATATTTTAGCTACTAAAACAAAATATAAACTGGATAGCTTATAAACAACATAAACTTATTTCTCACA
2321 GTTTTGGAGGCTGTGAAGTCCAAGATTAAGGCACTAACAGATCTAGTGTCTGGTAAGGCAAATTTCTGGCTCATAGATGG
2401 TACCTTCTTGCTGTGTCCCCACATGGTAGATGGGAAGAACTGGTCTCATTGGCCCCTTATAAGGACATTAATTCCACTCA
2481 ATAGGCTCCACCCTCATGATCTAATAACCTCTCAAAGGCCCTACCTCCTAATACTAACACATTGAGGATGTGACTTCAAC
2561 TTTACATTTCTACAGGCAGAGAAGTGGGGCTGTGTAAATTCTTCCCATCAGTACTTGAATGTTCATTTAACAAATAACTT
2641 ATCGAGCATCTAGCATGTTCCAGACACAATCTGAACACTGAGCACACAACAGTTGGAACAAATATGATTCCTATCCTCAT
2721 GGAGCTTCTATTCTCCTGTGAAAAACAGATGTTAAACATGATTGAGGATTAGGTTTCAACATAAGAATTCTAGGAGGACA
2801 CAGACATTTAGACCATAGCATCTTCAGGTAAACTTTATCTTCAGTAAATTAAAGAGATCTATTTAGATGACCTTTGAGCA
2881 TCTTAATTATTAGATGTCAGTGCTAGTTTAACTTATTTTAAACGTTTCAGATATTTATTTAATTATACTTTAAGTGTCTC
2961 ATGTAAAAAAGTTATTTATAAAATAATTTATAGGGTTAGAGTCATTGCCCTTTTAATGCAACAAATAAACAGTTTTTTAA
3041 AAACCTGCATGGGGGCCAGGCGCGGTGGTTCATACCTGCAATCCCAGCACTTTGGGAGGTCGAGGCTGGCGGATCACGAG
3121 GTCAGGAGATCGAGACCACCCTGATTAATGCGGTGAAATCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGACGTGGT
3201 GGTGGGCACCTATAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGAAGGCGGAGCTTGCAGTGA
3281 ACCAAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCGCAAAAAAAAAAAAAAAAAAACCTGCAT
3361 GGAAGCCTAGTATATTTATTAATAACAAATAAATTATACTTTAGTGTACTATTAACCTATACCAATTTTAAGTTGTGATT
3441 AGGGAATGGGGATGTTTTTAAGCTGAATTGTCTTGCTGCGGAACTTTCCTTTTTTAATAAGACCATATTATGACTCTGAA
3521 TGCTCAAGGGTAAGTCTAAGGCCTCATTGCTGTTACCAGGAGATTTTTCTAGTTACAGTAATAAAGATGTTAATTCACAT
3601 GCATGCAGACAACTGAAACTCAAGTGGAGAATTTGTTTGTGAACAAGTCATACTACTTCTGTTATTTGCATGAATGGAAT
3681 CTGCAATATCTTTTTCCATGGGAGACCCTAAAAGAAAACCCTGGATCAGAATGATCTGCAGTTTCAGATAATAAAGGCTT
3761 TTAAGAGACATTTTTAGAATTAAAAATATGCTAATTTTATTAAATGAAAATATTTGTAACTGTTAACTTTCTCACTGACA
3841 AAGCAAGTTTCTCAATAAAATACCTATTTTAACTTGCATTACTGACATCTTTTCTTTGAGTAATCTGAATAATGCAGAAG
3921 CCATCATAGAGGTCTTTTCTATACATTCTCAATGTTTTCTTAAATGGGTTTCCTGAGTTCTGTTCTTCATGACTCTGGGC
4001 TCTGCAAACAGGGTTTCCCAATTACGCATTCTATAAACACTTTTATGAATGAGTCAATATGACATTGAGTCCTTTTCATA
4081 CATTTCATCATTTCCAATATGTAGAGTGACAGCTAGAAAAATGATAAAATTTTGATTAAAACCTATCTCTTTTTCTTCAG
4161 CATAGTCAATTGTTTTCTTAACTCTCAATGAGTAACTCCATGCCTAGCTTGTGCTTAGCTTTCAATATTTTTAGACTAAG
4241 ACAAAGTGTATTTGGCATTTTGAGAACAACAATTAATGGTCAGTAAATTTCTAAAGCAAGAAAAATGTGAAACTAGTGTT
4321 TTATATGTTTGTTACGCAGCAGAATGCGGCTCTTAGTGTTTGCCCCTTCATATCTCATCATGTAAAATATTAAATTACTT
4401 TAGGCCACTGCACATAGGTAGTCCTGTCATGAGTGATGGCTGGAGAAAAGTTCAGGATCATAAATGTTATCATCATTCTT
4481 CAAGAAAAGATGAGATTATAAATTTCTGCAATTGGTATGATAAAAGGTTGAAATAATTAATGAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
IDDuplex structurePositionScoreMFE
1
miRNA  3' guuUGUGGUAACAGUGUGAGGu 5'
             :|:||| |   :|||||| 
Target 5' atcGCGCCACT---GCACTCCa 3'
3287 - 3305 136.00 -17.50
2
miRNA  3' guuUGUGGUAACAGUGUGAGGu 5'
             :::||| |   :|||||| 
Target 5' atcGTGCCACT---GCACTCCa 3'
579 - 597 132.00 -13.60
3
miRNA  3' guuUGUGGUAACAGUGUGAGGu 5'
             :::||| |   :|||||| 
Target 5' atcGTGCCACT---GCACTCCa 3'
2090 - 2108 132.00 -13.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30168976 12 COSMIC
COSN30103019 18 COSMIC
COSN30109615 44 COSMIC
COSN30142047 49 COSMIC
COSN30108695 99 COSMIC
COSN30535932 154 COSMIC
COSN22884856 162 COSMIC
COSN23541204 528 COSMIC
COSN23541203 531 COSMIC
COSN7147293 547 COSMIC
COSN24371531 1031 COSMIC
COSN4910295 1218 COSMIC
COSN31961746 1387 COSMIC
COSN27392593 1793 COSMIC
COSN27235305 1794 COSMIC
COSN1229012 2038 COSMIC
COSN27302105 2139 COSMIC
COSN1807404 2309 COSMIC
COSN17763853 3314 COSMIC
COSN29964305 3334 COSMIC
COSN24910478 3480 COSMIC
COSN6155086 4092 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1478233070 5 dbSNP
rs1187642919 9 dbSNP
rs765404739 10 dbSNP
rs374135134 11 dbSNP
rs202020371 12 dbSNP
rs1379362038 14 dbSNP
rs776934363 17 dbSNP
rs1357282058 29 dbSNP
rs1455128160 34 dbSNP
rs1465214345 38 dbSNP
rs764433905 41 dbSNP
rs370084901 42 dbSNP
rs202129444 43 dbSNP
rs373340538 44 dbSNP
rs762784066 46 dbSNP
rs773196674 47 dbSNP
rs901616460 58 dbSNP
rs1311585851 63 dbSNP
rs1310861395 66 dbSNP
rs1040047256 79 dbSNP
rs558004780 94 dbSNP
rs1393028615 95 dbSNP
rs1206300366 101 dbSNP
rs1373816554 103 dbSNP
rs1307122690 114 dbSNP
rs1407622699 124 dbSNP
rs1254400161 135 dbSNP
rs889035195 137 dbSNP
rs1190313681 145 dbSNP
rs1422596972 150 dbSNP
rs532239302 154 dbSNP
rs935814138 155 dbSNP
rs1411157327 156 dbSNP
rs867050647 159 dbSNP
rs1327832535 160 dbSNP
rs924459481 164 dbSNP
rs564564998 174 dbSNP
rs998316072 190 dbSNP
rs1293182348 191 dbSNP
rs1465079450 200 dbSNP
rs977249117 235 dbSNP
rs181905855 246 dbSNP
rs565888504 250 dbSNP
rs1328895639 252 dbSNP
rs1227164608 254 dbSNP
rs964216946 255 dbSNP
rs1161941276 257 dbSNP
rs1220129419 259 dbSNP
rs569942183 263 dbSNP
rs189649114 279 dbSNP
rs959641195 283 dbSNP
rs1250884797 297 dbSNP
rs1471467885 312 dbSNP
rs1033904409 315 dbSNP
rs554147737 320 dbSNP
rs534907218 321 dbSNP
rs952221629 323 dbSNP
rs1009936440 324 dbSNP
rs1026464520 329 dbSNP
rs993692647 336 dbSNP
rs901585344 339 dbSNP
rs1411973319 340 dbSNP
rs185202630 346 dbSNP
rs549178828 347 dbSNP
rs929460489 353 dbSNP
rs530763329 362 dbSNP
rs888786816 363 dbSNP
rs1054356378 379 dbSNP
rs1056883438 381 dbSNP
rs1343002999 391 dbSNP
rs937140516 400 dbSNP
rs1250580618 401 dbSNP
rs1481961272 404 dbSNP
rs1189752118 431 dbSNP
rs537727441 434 dbSNP
rs1472391988 438 dbSNP
rs1037558145 439 dbSNP
rs1241119894 441 dbSNP
rs1411804301 443 dbSNP
rs903137178 444 dbSNP
rs1317379392 445 dbSNP
rs551159334 446 dbSNP
rs1428261663 451 dbSNP
rs949929103 453 dbSNP
rs917963651 454 dbSNP
rs992212149 458 dbSNP
rs983185938 459 dbSNP
rs1366795646 460 dbSNP
rs1357015039 462 dbSNP
rs1273503758 467 dbSNP
rs938000110 468 dbSNP
rs1201974097 478 dbSNP
rs533047462 478 dbSNP
rs1279135552 480 dbSNP
rs1441630060 488 dbSNP
rs377233231 491 dbSNP
rs192974959 495 dbSNP
rs1451435980 496 dbSNP
rs549661865 501 dbSNP
rs984831046 504 dbSNP
rs952380048 509 dbSNP
rs1454823535 510 dbSNP
rs1174525344 511 dbSNP
rs919540463 517 dbSNP
rs1414237645 520 dbSNP
rs1332792496 525 dbSNP
rs547408103 541 dbSNP
rs1296153545 556 dbSNP
rs1157467151 560 dbSNP
rs1362382796 561 dbSNP
rs976847910 573 dbSNP
rs529539183 575 dbSNP
rs1418981050 576 dbSNP
rs1465242708 578 dbSNP
rs1247557053 581 dbSNP
rs1018670323 582 dbSNP
rs964186321 587 dbSNP
rs1007733861 588 dbSNP
rs1477921293 590 dbSNP
rs1440854058 592 dbSNP
rs562071649 597 dbSNP
rs1205791479 600 dbSNP
rs1033079552 607 dbSNP
rs1267388870 610 dbSNP
rs1385857810 616 dbSNP
rs1000396655 618 dbSNP
rs1323835384 622 dbSNP
rs999899463 622 dbSNP
rs1206694762 630 dbSNP
rs553395199 641 dbSNP
rs1293616876 642 dbSNP
rs1329592305 646 dbSNP
rs148922759 651 dbSNP
rs1227785485 655 dbSNP
rs1266138442 655 dbSNP
rs59055819 655 dbSNP
rs71024806 655 dbSNP
rs71407115 655 dbSNP
rs1243617364 656 dbSNP
rs1338332010 658 dbSNP
rs1297172284 660 dbSNP
rs60078795 662 dbSNP
rs1459023445 674 dbSNP
rs1382275909 691 dbSNP
rs1163268467 694 dbSNP
rs1388602395 698 dbSNP
rs1020572426 701 dbSNP
rs1010277041 722 dbSNP
rs1309474702 726 dbSNP
rs1350931760 734 dbSNP
rs1408935554 739 dbSNP
rs1286411143 742 dbSNP
rs903106061 745 dbSNP
rs1247101398 756 dbSNP
rs1266169610 761 dbSNP
rs1395693884 770 dbSNP
rs1162971843 773 dbSNP
rs1471973792 778 dbSNP
rs895489884 783 dbSNP
rs1041621938 790 dbSNP
rs1057254746 792 dbSNP
rs1249041125 796 dbSNP
rs918119491 810 dbSNP
rs1448967604 819 dbSNP
rs1246210807 822 dbSNP
rs1188841590 827 dbSNP
rs1001257013 847 dbSNP
rs1422186052 848 dbSNP
rs1014010878 855 dbSNP
rs1370742889 863 dbSNP
rs79631467 865 dbSNP
rs1296177163 870 dbSNP
rs11690262 871 dbSNP
rs1273652696 877 dbSNP
rs938074262 880 dbSNP
rs1353881777 886 dbSNP
rs1252671388 890 dbSNP
rs926754419 893 dbSNP
rs907745399 897 dbSNP
rs1047648675 904 dbSNP
rs1363860202 906 dbSNP
rs929939976 909 dbSNP
rs1250039164 914 dbSNP
rs1049522128 919 dbSNP
rs930701043 930 dbSNP
rs976770921 935 dbSNP
rs919470301 936 dbSNP
rs148541020 939 dbSNP
rs966170639 947 dbSNP
rs912047507 954 dbSNP
rs545937438 957 dbSNP
rs953241203 959 dbSNP
rs1032802209 962 dbSNP
rs1403918322 974 dbSNP
rs1020923636 978 dbSNP
rs1466340075 980 dbSNP
rs1302215663 985 dbSNP
rs1403765046 994 dbSNP
rs1450551596 1011 dbSNP
rs1399029764 1013 dbSNP
rs144744235 1018 dbSNP
rs1366009929 1044 dbSNP
rs1214276450 1069 dbSNP
rs967026709 1073 dbSNP
rs1314362291 1081 dbSNP
rs1234367440 1085 dbSNP
rs1255921195 1090 dbSNP
rs1035300635 1091 dbSNP
rs1211109065 1099 dbSNP
rs1429280398 1109 dbSNP
rs1001185080 1113 dbSNP
rs1184457805 1117 dbSNP
rs553877559 1119 dbSNP
rs1020131160 1139 dbSNP
rs1175008552 1150 dbSNP
rs905617899 1165 dbSNP
rs190303446 1174 dbSNP
rs765715148 1184 dbSNP
rs1014145113 1187 dbSNP
rs895760152 1189 dbSNP
rs573969084 1201 dbSNP
rs1369911325 1203 dbSNP
rs1001407803 1205 dbSNP
rs768223857 1208 dbSNP
rs1321847302 1215 dbSNP
rs149367415 1223 dbSNP
rs537367206 1240 dbSNP
rs569701348 1241 dbSNP
rs1327890095 1242 dbSNP
rs919272063 1248 dbSNP
rs1036591382 1249 dbSNP
rs944928727 1250 dbSNP
rs1048081476 1255 dbSNP
rs912182336 1261 dbSNP
rs1266596591 1278 dbSNP
rs986702767 1279 dbSNP
rs1159887383 1282 dbSNP
rs551559947 1285 dbSNP
rs529893873 1286 dbSNP
rs901784244 1294 dbSNP
rs1235839362 1297 dbSNP
rs138896106 1298 dbSNP
rs1274804736 1299 dbSNP
rs1344074992 1303 dbSNP
rs1434875395 1306 dbSNP
rs1412009793 1308 dbSNP
rs1337912424 1309 dbSNP
rs1041056993 1315 dbSNP
rs1409513574 1316 dbSNP
rs978550211 1317 dbSNP
rs1221590170 1319 dbSNP
rs1291477193 1320 dbSNP
rs1491063787 1321 dbSNP
rs1221338341 1322 dbSNP
rs775644830 1322 dbSNP
rs1468588347 1323 dbSNP
rs35253539 1323 dbSNP
rs368569696 1323 dbSNP
rs60581210 1323 dbSNP
rs758032823 1323 dbSNP
rs764681424 1323 dbSNP
rs796702370 1323 dbSNP
rs797007476 1323 dbSNP
rs1183519670 1324 dbSNP
rs1416099934 1328 dbSNP
rs1034354719 1329 dbSNP
rs1175656484 1329 dbSNP
rs1406003905 1329 dbSNP
rs942719714 1329 dbSNP
rs979770186 1335 dbSNP
rs1435384564 1341 dbSNP
rs1308954633 1342 dbSNP
rs1019890675 1346 dbSNP
rs992480390 1349 dbSNP
rs1440737257 1351 dbSNP
rs1424499190 1352 dbSNP
rs959938598 1357 dbSNP
rs1312508444 1360 dbSNP
rs565812871 1363 dbSNP
rs1365331374 1372 dbSNP
rs1205407044 1374 dbSNP
rs10930665 1386 dbSNP
rs1482559609 1389 dbSNP
rs775634709 1396 dbSNP
rs115748529 1397 dbSNP
rs1028124415 1402 dbSNP
rs1182991724 1404 dbSNP
rs994939282 1406 dbSNP
rs897942058 1408 dbSNP
rs1383631853 1410 dbSNP
rs1451627456 1412 dbSNP
rs1169464496 1423 dbSNP
rs1419304255 1424 dbSNP
rs1036356641 1425 dbSNP
rs944728442 1426 dbSNP
rs890664032 1437 dbSNP
rs1200320812 1439 dbSNP
rs541108841 1457 dbSNP
rs760788185 1461 dbSNP
rs932116023 1464 dbSNP
rs1015937122 1465 dbSNP
rs1228732443 1471 dbSNP
rs370415818 1476 dbSNP
rs1005985933 1486 dbSNP
rs1337227806 1497 dbSNP
rs1280564282 1505 dbSNP
rs1228142983 1508 dbSNP
rs1348907315 1509 dbSNP
rs1315047775 1518 dbSNP
rs886209514 1522 dbSNP
rs1460771767 1526 dbSNP
rs1056035 1528 dbSNP
rs1358669304 1532 dbSNP
rs550033129 1539 dbSNP
rs1038974520 1540 dbSNP
rs901760545 1540 dbSNP
rs942645974 1543 dbSNP
rs889805784 1544 dbSNP
rs945785556 1547 dbSNP
rs913015979 1550 dbSNP
rs1412759089 1554 dbSNP
rs1410055803 1564 dbSNP
rs11537747 1566 dbSNP
rs531892612 1575 dbSNP
rs564517265 1577 dbSNP
rs546424754 1583 dbSNP
rs1469795692 1586 dbSNP
rs1174860497 1588 dbSNP
rs1390262802 1597 dbSNP
rs959734413 1604 dbSNP
rs1435127414 1605 dbSNP
rs1034645845 1606 dbSNP
rs947476520 1617 dbSNP
rs913336090 1622 dbSNP
rs546461470 1646 dbSNP
rs759776814 1649 dbSNP
rs938850748 1672 dbSNP
rs1331349246 1684 dbSNP
rs1205751149 1686 dbSNP
rs1261307945 1688 dbSNP
rs1445549614 1689 dbSNP
rs866304344 1692 dbSNP
rs772933093 1693 dbSNP
rs928856736 1695 dbSNP
rs769581223 1701 dbSNP
rs1207397567 1717 dbSNP
rs1480308146 1719 dbSNP
rs952628916 1732 dbSNP
rs73022139 1741 dbSNP
rs1269286771 1743 dbSNP
rs1414749067 1743 dbSNP
rs184641581 1755 dbSNP
rs1208607333 1756 dbSNP
rs969671420 1757 dbSNP
rs1295428727 1763 dbSNP
rs1323802591 1767 dbSNP
rs994036793 1770 dbSNP
rs191694663 1771 dbSNP
rs748002745 1784 dbSNP
rs1282564116 1791 dbSNP
rs1432933435 1792 dbSNP
rs1346939959 1793 dbSNP
rs1350986514 1799 dbSNP
rs897910820 1804 dbSNP
rs1260263928 1807 dbSNP
rs796936192 1807 dbSNP
rs879874084 1807 dbSNP
rs1292704363 1814 dbSNP
rs1490290532 1825 dbSNP
rs1015018744 1828 dbSNP
rs35768545 1835 dbSNP
rs1008868242 1842 dbSNP
rs890476555 1857 dbSNP
rs1197664004 1864 dbSNP
rs574861044 1867 dbSNP
rs1026520787 1871 dbSNP
rs997322729 1875 dbSNP
rs1361628510 1882 dbSNP
rs1386203243 1884 dbSNP
rs549542973 1893 dbSNP
rs1405665751 1894 dbSNP
rs1364493670 1902 dbSNP
rs1017506161 1906 dbSNP
rs1007502280 1909 dbSNP
rs1370910268 1912 dbSNP
rs1390820081 1914 dbSNP
rs903796570 1918 dbSNP
rs1043050556 1925 dbSNP
rs531137640 1926 dbSNP
rs891876457 1934 dbSNP
rs1358936678 1935 dbSNP
rs11688663 1937 dbSNP
rs1043197040 1938 dbSNP
rs1481161445 1943 dbSNP
rs1195785606 1948 dbSNP
rs545041628 1949 dbSNP
rs1443644833 1954 dbSNP
rs1463887511 1962 dbSNP
rs1275502001 1965 dbSNP
rs1222762195 1966 dbSNP
rs1170093912 1989 dbSNP
rs1377629315 1989 dbSNP
rs1384245227 1989 dbSNP
rs1442444584 1989 dbSNP
rs938822450 1989 dbSNP
rs1337527218 1992 dbSNP
rs1454670732 1992 dbSNP
rs1382087691 1993 dbSNP
rs1244144167 1995 dbSNP
rs928824110 1999 dbSNP
rs946255956 2002 dbSNP
rs1227064070 2008 dbSNP
rs1250157682 2010 dbSNP
rs1484495238 2011 dbSNP
rs912942296 2012 dbSNP
rs1056816149 2013 dbSNP
rs1242067005 2025 dbSNP
rs370335649 2034 dbSNP
rs938319073 2036 dbSNP
rs1190130509 2055 dbSNP
rs774235380 2057 dbSNP
rs1044564540 2063 dbSNP
rs1216512241 2081 dbSNP
rs1366032689 2083 dbSNP
rs926996490 2092 dbSNP
rs372443073 2093 dbSNP
rs1470285879 2097 dbSNP
rs909500004 2099 dbSNP
rs952653413 2108 dbSNP
rs1405512529 2113 dbSNP
rs1450465659 2119 dbSNP
rs1290858416 2123 dbSNP
rs1362940958 2132 dbSNP
rs1362870578 2133 dbSNP
rs1382030804 2134 dbSNP
rs1327718473 2135 dbSNP
rs1317534193 2137 dbSNP
rs1349041280 2138 dbSNP
rs891634716 2139 dbSNP
rs919882332 2140 dbSNP
rs117680606 2143 dbSNP
rs1390267739 2147 dbSNP
rs1260970281 2155 dbSNP
rs1485369426 2155 dbSNP
rs763267619 2155 dbSNP
rs1184375294 2161 dbSNP
rs1269282892 2164 dbSNP
rs1167398131 2168 dbSNP
rs961208753 2169 dbSNP
rs1255405731 2180 dbSNP
rs1161315268 2182 dbSNP
rs1192182501 2182 dbSNP
rs1345837551 2191 dbSNP
rs1014990607 2195 dbSNP
rs1453365902 2199 dbSNP
rs1009005687 2205 dbSNP
rs1347799753 2207 dbSNP
rs746493934 2208 dbSNP
rs12105876 2211 dbSNP
rs1344123096 2219 dbSNP
rs1225953847 2220 dbSNP
rs1307137546 2223 dbSNP
rs1028983188 2227 dbSNP
rs565621981 2228 dbSNP
rs1266786054 2233 dbSNP
rs1245283331 2247 dbSNP
rs1206910867 2248 dbSNP
rs1266707785 2264 dbSNP
rs748419124 2266 dbSNP
rs781068678 2273 dbSNP
rs1177677739 2275 dbSNP
rs1408887523 2277 dbSNP
rs904769073 2282 dbSNP
rs1418523448 2295 dbSNP
rs547054641 2302 dbSNP
rs1157206621 2305 dbSNP
rs1043289573 2306 dbSNP
rs1168854428 2321 dbSNP
rs1302978114 2326 dbSNP
rs1010324235 2330 dbSNP
rs1445076155 2336 dbSNP
rs891976359 2347 dbSNP
rs1280636017 2356 dbSNP
rs1274100764 2358 dbSNP
rs1221506210 2360 dbSNP
rs1022672755 2363 dbSNP
rs1056784067 2388 dbSNP
rs1011542908 2394 dbSNP
rs186496471 2414 dbSNP
rs1289371370 2415 dbSNP
rs138536290 2423 dbSNP
rs1205200303 2428 dbSNP
rs1232169631 2439 dbSNP
rs1044065512 2443 dbSNP
rs1480368294 2446 dbSNP
rs1002894438 2449 dbSNP
rs1387142681 2450 dbSNP
rs907324178 2451 dbSNP
rs563662499 2454 dbSNP
rs1387238824 2468 dbSNP
rs1366649819 2469 dbSNP
rs1044533297 2475 dbSNP
rs930976627 2481 dbSNP
rs1330151082 2482 dbSNP
rs34267708 2486 dbSNP
rs397870967 2486 dbSNP
rs909424944 2488 dbSNP
rs1411338660 2489 dbSNP
rs1370780405 2490 dbSNP
rs1338187361 2496 dbSNP
rs1306913102 2497 dbSNP
rs919807219 2539 dbSNP
rs765545875 2540 dbSNP
rs972658595 2540 dbSNP
rs1341219400 2542 dbSNP
rs961178754 2552 dbSNP
rs1214905615 2569 dbSNP
rs1396307753 2573 dbSNP
rs1272234424 2575 dbSNP
rs1305748034 2577 dbSNP
rs912383524 2579 dbSNP
rs1245116172 2583 dbSNP
rs549407639 2586 dbSNP
rs1183238820 2595 dbSNP
rs1241447192 2607 dbSNP
rs954812014 2608 dbSNP
rs944427162 2609 dbSNP
rs745523724 2614 dbSNP
rs996151659 2616 dbSNP
rs12619175 2621 dbSNP
rs1451201456 2631 dbSNP
rs1334325005 2636 dbSNP
rs1483528780 2643 dbSNP
rs1430988483 2653 dbSNP
rs1021800810 2658 dbSNP
rs1010463079 2661 dbSNP
rs1203225716 2663 dbSNP
rs892069187 2668 dbSNP
rs183791499 2669 dbSNP
rs1203070474 2677 dbSNP
rs1256594432 2677 dbSNP
rs145806211 2687 dbSNP
rs527854188 2688 dbSNP
rs1311518672 2690 dbSNP
rs1449003429 2692 dbSNP
rs1194126480 2699 dbSNP
rs1044546018 2713 dbSNP
rs192408002 2714 dbSNP
rs1477036204 2715 dbSNP
rs930965886 2719 dbSNP
rs1299006901 2720 dbSNP
rs1202239365 2734 dbSNP
rs1430564275 2749 dbSNP
rs1422068511 2751 dbSNP
rs1229963629 2752 dbSNP
rs1386457522 2753 dbSNP
rs1400999149 2760 dbSNP
rs1317182065 2764 dbSNP
rs1350776537 2766 dbSNP
rs543771582 2767 dbSNP
rs1283884432 2773 dbSNP
rs1036724630 2780 dbSNP
rs1221588222 2794 dbSNP
rs534008187 2796 dbSNP
rs1206002332 2805 dbSNP
rs754207288 2812 dbSNP
rs1487513158 2814 dbSNP
rs1407567577 2816 dbSNP
rs1225125852 2818 dbSNP
rs1270025669 2825 dbSNP
rs1480421860 2840 dbSNP
rs1197367726 2853 dbSNP
rs1365095149 2857 dbSNP
rs1403742386 2858 dbSNP
rs758726455 2859 dbSNP
rs1157641472 2862 dbSNP
rs1302909774 2867 dbSNP
rs912519144 2869 dbSNP
rs986646392 2872 dbSNP
rs530224652 2890 dbSNP
rs1357900769 2897 dbSNP
rs1023007003 2908 dbSNP
rs1364698465 2912 dbSNP
rs1403096325 2916 dbSNP
rs1330791128 2921 dbSNP
rs922003384 2923 dbSNP
rs975244036 2924 dbSNP
rs1161891120 2933 dbSNP
rs1351847171 2933 dbSNP
rs1293047644 2942 dbSNP
rs1490285044 2949 dbSNP
rs1208593248 2951 dbSNP
rs140686258 2951 dbSNP
rs34172027 2954 dbSNP
rs370036558 2958 dbSNP
rs778314327 2961 dbSNP
rs887959366 2962 dbSNP
rs759889899 2971 dbSNP
rs968666882 2973 dbSNP
rs1163821814 2974 dbSNP
rs12612661 2977 dbSNP
rs139787419 2984 dbSNP
rs1180297781 2990 dbSNP
rs1390730741 3000 dbSNP
rs752774172 3009 dbSNP
rs1476276941 3018 dbSNP
rs956282556 3025 dbSNP
rs1454840114 3029 dbSNP
rs557689844 3030 dbSNP
rs1199936506 3032 dbSNP
rs910264406 3039 dbSNP
rs985890762 3044 dbSNP
rs1036357229 3045 dbSNP
rs1003011069 3051 dbSNP
rs1254148182 3052 dbSNP
rs148730948 3056 dbSNP
rs915039772 3060 dbSNP
rs1462256674 3061 dbSNP
rs988020070 3062 dbSNP
rs796425298 3063 dbSNP
rs1022689570 3064 dbSNP
rs1172334673 3066 dbSNP
rs767598589 3068 dbSNP
rs796116545 3069 dbSNP
rs898279174 3070 dbSNP
rs1036692486 3077 dbSNP
rs1398219548 3079 dbSNP
rs1337677065 3082 dbSNP
rs576234089 3082 dbSNP
rs1312861304 3083 dbSNP
rs558065603 3094 dbSNP
rs1051460425 3101 dbSNP
rs188908506 3102 dbSNP
rs1227414895 3106 dbSNP
rs10192906 3110 dbSNP
rs572176574 3111 dbSNP
rs553554312 3117 dbSNP
rs921113663 3118 dbSNP
rs535168613 3121 dbSNP
rs1482096381 3125 dbSNP
rs947460778 3129 dbSNP
rs914692122 3131 dbSNP
rs993715223 3132 dbSNP
rs10930664 3139 dbSNP
rs1431300881 3145 dbSNP
rs1369238231 3150 dbSNP
rs1186990298 3151 dbSNP
rs1422155755 3152 dbSNP
rs1263891953 3162 dbSNP
rs555719589 3163 dbSNP
rs1035918320 3171 dbSNP
rs982119832 3173 dbSNP
rs1386146735 3175 dbSNP
rs970361297 3176 dbSNP
rs1399706746 3182 dbSNP
rs1465284070 3185 dbSNP
rs1267348375 3186 dbSNP
rs1206558061 3194 dbSNP
rs1023544479 3195 dbSNP
rs944321980 3196 dbSNP
rs1309925834 3202 dbSNP
rs537882838 3203 dbSNP
rs1237320042 3206 dbSNP
rs1338197213 3207 dbSNP
rs1299106443 3208 dbSNP
rs1436536352 3212 dbSNP
rs1260882510 3217 dbSNP
rs898247784 3224 dbSNP
rs1050111858 3227 dbSNP
rs1015352471 3228 dbSNP
rs1319009252 3230 dbSNP
rs761571603 3231 dbSNP
rs1198592795 3240 dbSNP
rs776327847 3252 dbSNP
rs1003844874 3259 dbSNP
rs890798063 3260 dbSNP
rs1388863373 3262 dbSNP
rs577294478 3267 dbSNP
rs1162918325 3268 dbSNP
rs1296786852 3271 dbSNP
rs946445105 3275 dbSNP
rs1456519237 3278 dbSNP
rs1406160215 3283 dbSNP
rs1392112001 3284 dbSNP
rs573313366 3289 dbSNP
rs899775874 3290 dbSNP
rs184108136 3291 dbSNP
rs369021370 3292 dbSNP
rs1307290630 3294 dbSNP
rs1190877549 3295 dbSNP
rs1453146109 3297 dbSNP
rs771644373 3307 dbSNP
rs1267706148 3308 dbSNP
rs1208886297 3313 dbSNP
rs1293756791 3317 dbSNP
rs1052693816 3319 dbSNP
rs1221673371 3322 dbSNP
rs1353803881 3328 dbSNP
rs1178971447 3330 dbSNP
rs1276239607 3331 dbSNP
rs191460156 3332 dbSNP
rs1342135362 3333 dbSNP
rs1296069783 3334 dbSNP
rs1164731302 3335 dbSNP
rs1425623991 3335 dbSNP
rs34524533 3335 dbSNP
rs1444965024 3336 dbSNP
rs1298294950 3344 dbSNP
rs1489255782 3345 dbSNP
rs1444197948 3347 dbSNP
rs1316640975 3350 dbSNP
rs927848988 3350 dbSNP
rs1323237075 3351 dbSNP
rs946591288 3352 dbSNP
rs1491276222 3354 dbSNP
rs1491361884 3354 dbSNP
rs34739011 3354 dbSNP
rs397869651 3354 dbSNP
rs397870406 3354 dbSNP
rs556144466 3354 dbSNP
rs72109521 3354 dbSNP
rs765265570 3354 dbSNP
rs777285724 3354 dbSNP
rs982009227 3358 dbSNP
rs914625110 3365 dbSNP
rs1053144498 3369 dbSNP
rs1245160555 3379 dbSNP
rs1445641542 3380 dbSNP
rs1181689385 3383 dbSNP
rs1412037289 3393 dbSNP
rs1412193290 3397 dbSNP
rs927134267 3409 dbSNP
rs1372615346 3410 dbSNP
rs934639500 3410 dbSNP
rs1308767753 3413 dbSNP
rs527983495 3416 dbSNP
rs1388359553 3418 dbSNP
rs1243455117 3423 dbSNP
rs1166093935 3432 dbSNP
rs554998759 3443 dbSNP
rs1478935704 3455 dbSNP
rs559031546 3455 dbSNP
rs548838097 3468 dbSNP
rs1383001307 3476 dbSNP
rs1378051602 3477 dbSNP
rs970709529 3479 dbSNP
rs1489743561 3480 dbSNP
rs756800752 3481 dbSNP
rs10930663 3484 dbSNP
rs994032946 3488 dbSNP
rs974201859 3490 dbSNP
rs1265058579 3496 dbSNP
rs1019184931 3503 dbSNP
rs962876862 3506 dbSNP
rs1209677580 3508 dbSNP
rs1236142791 3512 dbSNP
rs1009135235 3514 dbSNP
rs1187618118 3522 dbSNP
rs1423485981 3525 dbSNP
rs1476565640 3527 dbSNP
rs1205366079 3529 dbSNP
rs1015321214 3533 dbSNP
rs889399181 3541 dbSNP
rs1050080047 3547 dbSNP
rs1331727368 3551 dbSNP
rs1346752769 3552 dbSNP
rs1003982051 3554 dbSNP
rs1010608161 3557 dbSNP
rs775003531 3576 dbSNP
rs112680430 3577 dbSNP
rs562996474 3581 dbSNP
rs1202714432 3588 dbSNP
rs1052196280 3589 dbSNP
rs1346307578 3596 dbSNP
rs1338401729 3598 dbSNP
rs1225236281 3603 dbSNP
rs1274678352 3604 dbSNP
rs955173136 3629 dbSNP
rs188664655 3632 dbSNP
rs927822477 3638 dbSNP
rs1449127779 3641 dbSNP
rs1409369852 3656 dbSNP
rs1046241676 3658 dbSNP
rs1368806303 3671 dbSNP
rs1487615380 3684 dbSNP
rs996558788 3686 dbSNP
rs947961524 3702 dbSNP
rs771708281 3719 dbSNP
rs991897135 3720 dbSNP
rs899744453 3722 dbSNP
rs532502224 3724 dbSNP
rs536186458 3786 dbSNP
rs745433827 3789 dbSNP
rs1010666169 3794 dbSNP
rs13383797 3801 dbSNP
rs1406760346 3815 dbSNP
rs1052244284 3820 dbSNP
rs763507211 3840 dbSNP
rs1019110556 3846 dbSNP
rs928771568 3850 dbSNP
rs1232571186 3855 dbSNP
rs1273320133 3873 dbSNP
rs1046146626 3884 dbSNP
rs1009102602 3896 dbSNP
rs1413846695 3897 dbSNP
rs1241105243 3898 dbSNP
rs567430263 3917 dbSNP
rs1472024996 3921 dbSNP
rs1351941618 3923 dbSNP
rs1230731498 3926 dbSNP
rs546030786 3928 dbSNP
rs1029248055 3931 dbSNP
rs1268620718 3934 dbSNP
rs1010952788 3936 dbSNP
rs916112985 3941 dbSNP
rs1196192770 3942 dbSNP
rs893482827 3949 dbSNP
rs1439998863 3955 dbSNP
rs1157664994 3973 dbSNP
rs1031147009 3976 dbSNP
rs746923715 3979 dbSNP
rs1426240663 3981 dbSNP
rs974332894 3985 dbSNP
rs999267256 3989 dbSNP
rs1384984101 4006 dbSNP
rs1321713918 4017 dbSNP
rs11894961 4025 dbSNP
rs1046209401 4026 dbSNP
rs908690793 4035 dbSNP
rs1375188969 4041 dbSNP
rs1248562029 4046 dbSNP
rs1266381606 4049 dbSNP
rs947930619 4058 dbSNP
rs1356315850 4060 dbSNP
rs895028614 4068 dbSNP
rs982977091 4072 dbSNP
rs1457778656 4078 dbSNP
rs1177628072 4082 dbSNP
rs1048315629 4087 dbSNP
rs371549841 4088 dbSNP
rs1188050895 4095 dbSNP
rs1367643074 4097 dbSNP
rs930610970 4098 dbSNP
rs1269104606 4104 dbSNP
rs920587568 4117 dbSNP
rs547632382 4122 dbSNP
rs1402561224 4126 dbSNP
rs972502681 4136 dbSNP
rs777302925 4142 dbSNP
rs1448819797 4151 dbSNP
rs553548333 4163 dbSNP
rs1339895616 4182 dbSNP
rs912018299 4184 dbSNP
rs1313974547 4188 dbSNP
rs1333462902 4191 dbSNP
rs1468103708 4196 dbSNP
rs955290894 4200 dbSNP
rs1243275494 4201 dbSNP
rs1390576565 4207 dbSNP
rs1159606727 4213 dbSNP
rs1318035539 4240 dbSNP
rs1197399893 4241 dbSNP
rs1255574671 4262 dbSNP
rs1456436936 4267 dbSNP
rs1200671371 4273 dbSNP
rs749627261 4275 dbSNP
rs147974335 4278 dbSNP
rs1183194508 4279 dbSNP
rs1424193780 4286 dbSNP
rs1477442618 4305 dbSNP
rs953532752 4306 dbSNP
rs1236315046 4307 dbSNP
rs200434139 4309 dbSNP
rs1398202355 4313 dbSNP
rs1467829029 4313 dbSNP
rs1303587939 4320 dbSNP
rs1466630649 4326 dbSNP
rs1249107701 4327 dbSNP
rs1300608704 4332 dbSNP
rs143506713 4335 dbSNP
rs1022144269 4336 dbSNP
rs1010761009 4338 dbSNP
rs1315403025 4340 dbSNP
rs1254980876 4343 dbSNP
rs892412016 4347 dbSNP
rs1030785641 4348 dbSNP
rs148839897 4349 dbSNP
rs1003418646 4352 dbSNP
rs1421598043 4356 dbSNP
rs1434917783 4358 dbSNP
rs756587979 4370 dbSNP
rs958557156 4372 dbSNP
rs1377231635 4379 dbSNP
rs1030655930 4380 dbSNP
rs1300472221 4381 dbSNP
rs190396787 4382 dbSNP
rs1045826042 4383 dbSNP
rs1450431172 4390 dbSNP
rs570383280 4427 dbSNP
rs948698455 4429 dbSNP
rs1399989757 4430 dbSNP
rs1296823922 4437 dbSNP
rs1369104434 4447 dbSNP
rs894496474 4454 dbSNP
rs1386799521 4459 dbSNP
rs1299964015 4460 dbSNP
rs1321038997 4467 dbSNP
rs1310116558 4477 dbSNP
rs1038401974 4493 dbSNP
rs1286551399 4497 dbSNP
rs1352642624 4499 dbSNP
rs1434124517 4512 dbSNP
rs906292320 4515 dbSNP
rs1343179563 4517 dbSNP
rs1024683357 4519 dbSNP
rs1191893190 4526 dbSNP
rs1012002118 4534 dbSNP
rs1405532574 4542 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM714643. RNA binding protein: AGO2. Condition:completeT1, repB ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1
miRNA  3' guuugUGGUAACAGUGUGAGGu 5'
               :||| |   :|||||| 
Target 5' -----GCCACU---GCACUCCa 3'
1 - 14
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714643
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000392552.2 | 3UTR | GCCACUGCACUCCAGCCUGAGCAACAGAGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
MiRNA-Target Expression Profile (TCGA)
MiRNA Regulatory Network:
Functional analysis:
Strong evidence (reporter assay, western blot, qRT-PCR or qPCR) Other evidence
Transcription factor regulation Circular RNA sponge
534 hsa-miR-122-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000012 CYP7A1 cytochrome P450 family 7 subfamily A member 1 3 1
MIRT000364 IGF1R insulin like growth factor 1 receptor 4 3
MIRT000365 SRF serum response factor 4 1
MIRT000663 RAC1 Rac family small GTPase 1 5 2
MIRT000717 RHOA ras homolog family member A 2 2
MIRT003006 CCNG1 cyclin G1 4 4
MIRT003079 GTF2B general transcription factor IIB 2 1
MIRT003080 GYS1 glycogen synthase 1 4 2
MIRT003081 ANK2 ankyrin 2 3 1
MIRT003082 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 3 1
MIRT003083 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 3 1
MIRT003084 ANXA11 annexin A11 4 2
MIRT003085 ALDOA aldolase, fructose-bisphosphate A 3 2
MIRT003086 RAB6B RAB6B, member RAS oncogene family 3 1
MIRT003087 RAB11FIP1 RAB11 family interacting protein 1 4 2
MIRT003088 FOXP1 forkhead box P1 3 1
MIRT003089 MECP2 methyl-CpG binding protein 2 3 2
MIRT003090 NCAM1 neural cell adhesion molecule 1 4 3
MIRT003091 UBAP2 ubiquitin associated protein 2 3 1
MIRT003092 TBX19 T-box 19 3 1
MIRT003093 AACS acetoacetyl-CoA synthetase 3 1
MIRT003094 DUSP2 dual specificity phosphatase 2 3 1
MIRT003095 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 3 1
MIRT003097 MAPK11 mitogen-activated protein kinase 11 3 1
MIRT003098 FUNDC2 FUN14 domain containing 2 3 1
MIRT003099 AKT3 AKT serine/threonine kinase 3 3 3
MIRT003100 TPD52L2 tumor protein D52 like 2 4 3
MIRT003102 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 4 2
MIRT003103 G6PC3 glucose-6-phosphatase catalytic subunit 3 4 2
MIRT003104 AP3M2 adaptor related protein complex 3 mu 2 subunit 3 1
MIRT003105 SLC7A1 solute carrier family 7 member 1 4 4
MIRT003106 XPO6 exportin 6 3 1
MIRT003107 FOXJ3 forkhead box J3 3 1
MIRT003108 SLC7A11 solute carrier family 7 member 11 3 1
MIRT003109 TRIB1 tribbles pseudokinase 1 3 1
MIRT003110 EGLN3 egl-9 family hypoxia inducible factor 3 3 1
MIRT003111 NUMBL NUMB like, endocytic adaptor protein 3 1
MIRT003112 ADAM17 ADAM metallopeptidase domain 17 3 5
MIRT003727 DSTYK dual serine/threonine and tyrosine protein kinase 3 2
MIRT003728 FAM117B family with sequence similarity 117 member B 3 1
MIRT004364 BCL2L2 BCL2 like 2 4 2
MIRT004527 PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 2 1
MIRT004879 ADAM10 ADAM metallopeptidase domain 10 4 1
MIRT005782 ACVR1C activin A receptor type 1C 1 1
MIRT006123 PRKRA protein activator of interferon induced protein kinase EIF2AK2 4 1
MIRT006421 WNT1 Wnt family member 1 3 1
MIRT007007 PTPN1 protein tyrosine phosphatase, non-receptor type 1 1 1
MIRT007081 NT5C3A 5'-nucleotidase, cytosolic IIIA 1 1
MIRT007082 P4HA1 prolyl 4-hydroxylase subunit alpha 1 1 1
MIRT007083 ZNF395 zinc finger protein 395 1 1
MIRT007084 SOCS1 suppressor of cytokine signaling 1 1 1
MIRT023217 SSR3 signal sequence receptor subunit 3 1 1
MIRT023218 PHOX2A paired like homeobox 2a 1 1
MIRT023219 DZIP1L DAZ interacting zinc finger protein 1 like 1 1
MIRT023220 GSTM2 glutathione S-transferase mu 2 1 1
MIRT023221 RAI14 retinoic acid induced 14 1 1
MIRT023222 STARD13 StAR related lipid transfer domain containing 13 1 1
MIRT023223 CNN3 calponin 3 1 1
MIRT023224 A2M alpha-2-macroglobulin 1 1
MIRT023225 EFCAB6 EF-hand calcium binding domain 6 1 1
MIRT023226 GLOD4 glyoxalase domain containing 4 1 1
MIRT023227 CALR calreticulin 1 1
MIRT023228 POFUT1 protein O-fucosyltransferase 1 1 1
MIRT023229 PYGO1 pygopus family PHD finger 1 1 1
MIRT023230 CDY2B chromodomain Y-linked 2B 1 1
MIRT023231 CDC42EP3 CDC42 effector protein 3 1 1
MIRT023232 CS citrate synthase 2 2
MIRT023233 RNF170 ring finger protein 170 2 2
MIRT023234 GTF3C6 general transcription factor IIIC subunit 6 1 1
MIRT023235 ZNF321P zinc finger protein 321, pseudogene 1 1
MIRT023236 LAMP1 lysosomal associated membrane protein 1 1 1
MIRT023237 SLC52A2 solute carrier family 52 member 2 1 1
MIRT023238 ZNF658 zinc finger protein 658 1 1
MIRT023239 ATP13A3 ATPase 13A3 1 1
MIRT023240 CPNE5 copine 5 1 1
MIRT023241 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT023242 TMEM136 transmembrane protein 136 1 1
MIRT023243 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT023244 TMEM74 transmembrane protein 74 1 1
MIRT023245 ANKRD10 ankyrin repeat domain 10 1 1
MIRT023246 TBL1XR1 transducin beta like 1 X-linked receptor 1 1 1
MIRT023247 USP10 ubiquitin specific peptidase 10 1 1
MIRT023248 AKAP11 A-kinase anchoring protein 11 1 1
MIRT023249 BACH2 BTB domain and CNC homolog 2 1 1
MIRT023250 HCCS holocytochrome c synthase 1 1
MIRT023251 Slc7a1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1 1
MIRT023252 GTDC2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1 1
MIRT023253 CTPS1 CTP synthase 1 1 1
MIRT023254 SLC44A1 solute carrier family 44 member 1 1 1
MIRT023255 CLSPN claspin 1 1
MIRT023256 RABGEF1 RAB guanine nucleotide exchange factor 1 1 1
MIRT023257 FBXO7 F-box protein 7 1 1
MIRT023258 NCDN neurochondrin 1 1
MIRT023259 SOX2 SRY-box 2 1 1
MIRT023260 ZNF618 zinc finger protein 618 1 1
MIRT023261 ABLIM1 actin binding LIM protein 1 1 1
MIRT023262 ZBTB4 zinc finger and BTB domain containing 4 1 1
MIRT023263 LUZP1 leucine zipper protein 1 1 1
MIRT023264 NLGN3 neuroligin 3 1 1
MIRT023265 PRR11 proline rich 11 1 1
MIRT023266 HHAT hedgehog acyltransferase 1 1
MIRT023267 UBE2L3 ubiquitin conjugating enzyme E2 L3 1 1
MIRT023268 DNAJC18 DnaJ heat shock protein family (Hsp40) member C18 1 1
MIRT023269 FAM102A family with sequence similarity 102 member A 1 1
MIRT023270 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT023271 DENND2C DENN domain containing 2C 1 1
MIRT023272 HMOX1 heme oxygenase 1 3 2
MIRT023273 USP28 ubiquitin specific peptidase 28 1 1
MIRT023274 KRT18 keratin 18 1 1
MIRT023275 BPGM bisphosphoglycerate mutase 1 1
MIRT023276 ZNF233 zinc finger protein 233 1 1
MIRT023277 SLC25A30 solute carrier family 25 member 30 1 1
MIRT023278 ANKRD9 ankyrin repeat domain 9 2 2
MIRT023279 RLN1 relaxin 1 1 1
MIRT023280 DDIT3 DNA damage inducible transcript 3 1 1
MIRT023281 TRIM65 tripartite motif containing 65 1 1
MIRT023282 B4GALT1 beta-1,4-galactosyltransferase 1 1 1
MIRT023283 ANXA7 annexin A7 1 1
MIRT023284 SLC19A2 solute carrier family 19 member 2 1 1
MIRT023285 MARCKS myristoylated alanine rich protein kinase C substrate 1 1
MIRT023286 CLEC11A C-type lectin domain containing 11A 1 1
MIRT023287 CENPF centromere protein F 1 1
MIRT023288 CLDN18 claudin 18 1 1
MIRT023289 PFDN1 prefoldin subunit 1 1 1
MIRT023290 SPAG9 sperm associated antigen 9 1 1
MIRT023291 CEACAM8 carcinoembryonic antigen related cell adhesion molecule 8 1 1
MIRT023292 KRT10 keratin 10 1 1
MIRT023293 SET SET nuclear proto-oncogene 1 1
MIRT023294 SLC11A2 solute carrier family 11 member 2 1 1
MIRT023295 MYCBP MYC binding protein 2 2
MIRT023296 GPHB5 glycoprotein hormone beta 5 1 1
MIRT023297 STAU2 staufen double-stranded RNA binding protein 2 1 1
MIRT023298 NFATC1 nuclear factor of activated T-cells 1 1 1
MIRT023299 ERP29 endoplasmic reticulum protein 29 1 1
MIRT023300 MEP1A meprin A subunit alpha 1 1
MIRT023301 SPTLC1 serine palmitoyltransferase long chain base subunit 1 1 1
MIRT023302 GTF2H2 general transcription factor IIH subunit 2 1 1
MIRT023303 C14orf39 chromosome 14 open reading frame 39 1 1
MIRT023304 UBE2K ubiquitin conjugating enzyme E2 K 1 1
MIRT023305 PPP1R9B protein phosphatase 1 regulatory subunit 9B 1 1
MIRT023306 PSMD10 proteasome 26S subunit, non-ATPase 10 1 1
MIRT023307 CALD1 caldesmon 1 1 1
MIRT023308 TTYH3 tweety family member 3 1 1
MIRT023309 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 1 1
MIRT023310 SCN4B sodium voltage-gated channel beta subunit 4 1 1
MIRT023311 C1orf122 chromosome 1 open reading frame 122 1 1
MIRT023312 PAK1 p21 (RAC1) activated kinase 1 1 1
MIRT023313 DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 1 1
MIRT023314 DMXL1 Dmx like 1 1 1
MIRT023315 ZNF160 zinc finger protein 160 1 1
MIRT023316 CSRP1 cysteine and glycine rich protein 1 1 1
MIRT023317 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT023318 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 1 1
MIRT023319 ANKRD13C ankyrin repeat domain 13C 1 1
MIRT023320 SUCLA2 succinate-CoA ligase ADP-forming beta subunit 1 1
MIRT023321 PEA15 phosphoprotein enriched in astrocytes 15 1 1
MIRT023322 MTPN myotrophin 1 1
MIRT023323 YKT6 YKT6 v-SNARE homolog 1 1
MIRT023324 MOB3B MOB kinase activator 3B 1 1
MIRT023325 FAM118A family with sequence similarity 118 member A 1 1
MIRT023326 ZNF264 zinc finger protein 264 1 1
MIRT023327 HECTD3 HECT domain E3 ubiquitin protein ligase 3 1 1
MIRT023328 BATF2 basic leucine zipper ATF-like transcription factor 2 1 1
MIRT023329 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 1 1
MIRT023330 MAPRE1 microtubule associated protein RP/EB family member 1 1 1
MIRT023331 TBC1D22B TBC1 domain family member 22B 1 1
MIRT023332 SLC9A1 solute carrier family 9 member A1 2 2
MIRT023333 NPEPPS aminopeptidase puromycin sensitive 1 1
MIRT023334 BCL2L1 BCL2 like 1 2 1
MIRT023335 OSMR oncostatin M receptor 1 1
MIRT023336 CALU calumenin 1 1
MIRT023337 BRI3BP BRI3 binding protein 1 1
MIRT023338 PSPH phosphoserine phosphatase 1 1
MIRT023339 APMAP adipocyte plasma membrane associated protein 1 1
MIRT023340 WASF1 WAS protein family member 1 1 1
MIRT023341 LCA5 LCA5, lebercilin 1 1
MIRT023342 NODAL nodal growth differentiation factor 1 1
MIRT023343 CASP7 caspase 7 1 1
MIRT023344 CPA3 carboxypeptidase A3 1 1
MIRT023345 PALM paralemmin 1 1
MIRT023346 TCP11 t-complex 11 1 1
MIRT023347 NALCN sodium leak channel, non-selective 1 1
MIRT023348 PLAGL2 PLAG1 like zinc finger 2 1 1
MIRT023349 IDS iduronate 2-sulfatase 2 2
MIRT023350 PARP11 poly(ADP-ribose) polymerase family member 11 1 1
MIRT023351 MAZ MYC associated zinc finger protein 1 1
MIRT023352 CPNE4 copine 4 1 1
MIRT023353 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 1 1
MIRT023354 KRT14 keratin 14 1 1
MIRT023355 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 1 1
MIRT023356 GNL3L G protein nucleolar 3 like 1 1
MIRT023357 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 1 1
MIRT023358 EYA4 EYA transcriptional coactivator and phosphatase 4 1 1
MIRT023359 GNPDA2 glucosamine-6-phosphate deaminase 2 1 1
MIRT023360 BRCA2 BRCA2, DNA repair associated 1 1
MIRT023361 ZSCAN4 zinc finger and SCAN domain containing 4 1 1
MIRT023362 HSPA5 heat shock protein family A (Hsp70) member 5 1 1
MIRT023363 SERAC1 serine active site containing 1 1 1
MIRT023364 SLC15A2 solute carrier family 15 member 2 1 1
MIRT023365 RABIF RAB interacting factor 1 1
MIRT023366 ART3 ADP-ribosyltransferase 3 1 1
MIRT023367 EP400 E1A binding protein p400 1 1
MIRT023368 MT4 metallothionein 4 1 1
MIRT023369 TRAM2 translocation associated membrane protein 2 1 1
MIRT023370 PHPT1 phosphohistidine phosphatase 1 1 1
MIRT023371 KIAA0101 PCNA clamp associated factor 1 1
MIRT023372 VHL von Hippel-Lindau tumor suppressor 1 1
MIRT023373 IFNA1 interferon alpha 1 1 1
MIRT023374 FSTL3 follistatin like 3 1 1
MIRT023375 PHF14 PHD finger protein 14 1 1
MIRT023376 ZCCHC2 zinc finger CCHC-type containing 2 1 1
MIRT023377 GSTM3 glutathione S-transferase mu 3 1 1
MIRT023378 DCTN5 dynactin subunit 5 1 1
MIRT023379 CHST3 carbohydrate sulfotransferase 3 1 1
MIRT023380 HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 1 1
MIRT023381 ADO 2-aminoethanethiol dioxygenase 1 1
MIRT023382 POMZP3 POM121 and ZP3 fusion 1 1
MIRT023383 CHST12 carbohydrate sulfotransferase 12 1 1
MIRT023384 ARSB arylsulfatase B 1 1
MIRT023385 ATP7A ATPase copper transporting alpha 1 1
MIRT023386 PMP22 peripheral myelin protein 22 1 1
MIRT023387 TGFBRAP1 transforming growth factor beta receptor associated protein 1 1 1
MIRT023388 ORC2 origin recognition complex subunit 2 1 1
MIRT023389 CREB1 cAMP responsive element binding protein 1 1 1
MIRT023390 CD83 CD83 molecule 1 1
MIRT023391 TOB2 transducer of ERBB2, 2 2 3
MIRT023392 LRP11 LDL receptor related protein 11 1 1
MIRT023393 MPV17 MPV17, mitochondrial inner membrane protein 1 1
MIRT023394 TRIM29 tripartite motif containing 29 1 1
MIRT023395 OSBP2 oxysterol binding protein 2 1 1
MIRT023396 PKM pyruvate kinase, muscle 5 3
MIRT023397 FOXK2 forkhead box K2 2 2
MIRT023398 CLIC4 chloride intracellular channel 4 4 4
MIRT023399 ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 1 1
MIRT023400 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 1 1
MIRT023401 LMNB2 lamin B2 2 3
MIRT023402 BAX BCL2 associated X, apoptosis regulator 2 2
MIRT023403 CDK4 cyclin dependent kinase 4 2 2
MIRT054362 Cux1 cut-like homeobox 1 1 1
MIRT074336 TNRC6A trinucleotide repeat containing 6A 1 1
MIRT109185 VMA21 VMA21, vacuolar ATPase assembly factor 1 2
MIRT324745 ACER2 alkaline ceramidase 2 1 1
MIRT325564 HIATL1 major facilitator superfamily domain containing 14B 1 2
MIRT438005 MEF2D myocyte enhancer factor 2D 1 2
MIRT438206 TGFB1 transforming growth factor beta 1 1 1
MIRT438639 AXL AXL receptor tyrosine kinase 1 1
MIRT438655 NOD2 nucleotide binding oligomerization domain containing 2 3 1
MIRT438734 FUT8 fucosyltransferase 8 3 1
MIRT449879 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 1
MIRT451716 OLR1 oxidized low density lipoprotein receptor 1 1 1
MIRT453274 EFTUD2 elongation factor Tu GTP binding domain containing 2 1 1
MIRT454113 MRPL52 mitochondrial ribosomal protein L52 1 1
MIRT454232 OSBPL10 oxysterol binding protein like 10 1 7
MIRT454344 CDKL1 cyclin dependent kinase like 1 1 1
MIRT455826 ZSWIM1 zinc finger SWIM-type containing 1 1 1
MIRT459903 PIGO phosphatidylinositol glycan anchor biosynthesis class O 1 6
MIRT461654 G6PC glucose-6-phosphatase catalytic subunit 1 1
MIRT461934 TNFSF14 TNF superfamily member 14 1 1
MIRT463834 WSB1 WD repeat and SOCS box containing 1 1 1
MIRT468615 SUMO1 small ubiquitin-like modifier 1 1 1
MIRT469456 REL REL proto-oncogene, NF-kB subunit 1 3
MIRT469637 RAD21 RAD21 cohesin complex component 1 3
MIRT473432 MDM4 MDM4, p53 regulator 1 1
MIRT473872 MAFK MAF bZIP transcription factor K 1 3
MIRT476861 FHL2 four and a half LIM domains 2 1 2
MIRT476893 FBXO21 F-box protein 21 1 1
MIRT479880 CCDC43 coiled-coil domain containing 43 1 1
MIRT488848 UBTF upstream binding transcription factor, RNA polymerase I 1 1
MIRT491164 LRP3 LDL receptor related protein 3 1 1
MIRT497662 PRMT3 protein arginine methyltransferase 3 1 1
MIRT499314 ZNF485 zinc finger protein 485 1 5
MIRT499759 CIRH1A UTP4, small subunit processome component 1 5
MIRT500014 ABCF2 ATP binding cassette subfamily F member 2 1 4
MIRT501090 SLC7A5 solute carrier family 7 member 5 1 2
MIRT509646 ZNF354B zinc finger protein 354B 1 5
MIRT509945 TOMM70A translocase of outer mitochondrial membrane 70 1 3
MIRT510320 SLC2A3 solute carrier family 2 member 3 1 2
MIRT515505 GTF2F1 general transcription factor IIF subunit 1 1 1
MIRT516410 COPA coatomer protein complex subunit alpha 1 1
MIRT517861 NCAPD2 non-SMC condensin I complex subunit D2 1 2
MIRT522558 MCAM melanoma cell adhesion molecule 1 2
MIRT523525 GLUL glutamate-ammonia ligase 1 1
MIRT523764 FBXO27 F-box protein 27 1 2
MIRT524517 CDK19 cyclin dependent kinase 19 1 1
MIRT524753 BIRC5 baculoviral IAP repeat containing 5 1 3
MIRT529366 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 1 2
MIRT531189 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 1 1
MIRT531639 C19orf52 translocase of inner mitochondrial membrane 29 1 2
MIRT531913 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 1 1
MIRT532678 PATZ1 POZ/BTB and AT hook containing zinc finger 1 1 1
MIRT533115 YIPF4 Yip1 domain family member 4 1 2
MIRT534740 RBM47 RNA binding motif protein 47 1 1
MIRT535471 PARVB parvin beta 1 2
MIRT536742 HSPA4L heat shock protein family A (Hsp70) member 4 like 1 1
MIRT537237 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 1 1
MIRT539523 ABCF1 ATP binding cassette subfamily F member 1 1 2
MIRT540438 RBM43 RNA binding motif protein 43 1 1
MIRT542982 ERC1 ELKS/RAB6-interacting/CAST family member 1 1 1
MIRT544674 AP1S1 adaptor related protein complex 1 sigma 1 subunit 1 1
MIRT549514 HDDC2 HD domain containing 2 1 1
MIRT549663 ORC6 origin recognition complex subunit 6 1 2
MIRT555420 PPIC peptidylprolyl isomerase C 1 1
MIRT564701 ZNF322P1 zinc finger protein 322 pseudogene 1 1 1
MIRT570046 PKNOX1 PBX/knotted 1 homeobox 1 1 1
MIRT570257 PRSS16 protease, serine 16 1 1
MIRT571143 HM13 histocompatibility minor 13 1 1
MIRT575202 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 1 1
MIRT575282 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 1 1
MIRT575302 Osbpl10 oxysterol binding protein-like 10 1 1
MIRT575323 Fbxo6 F-box protein 6 1 1
MIRT575377 Ang angiogenin, ribonuclease, RNase A family, 5 1 1
MIRT575614 Zswim1 zinc finger SWIM-type containing 1 1 1
MIRT575671 Map1b microtubule-associated protein 1B 1 1
MIRT607065 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 1 1
MIRT607490 HEBP2 heme binding protein 2 1 1
MIRT607522 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 1 1
MIRT607655 BTN3A2 butyrophilin subfamily 3 member A2 1 1
MIRT607795 RHBDL2 rhomboid like 2 1 1
MIRT607842 PHLDA3 pleckstrin homology like domain family A member 3 1 1
MIRT607927 ANG angiogenin 1 1
MIRT607966 SNX22 sorting nexin 22 1 1
MIRT608074 ZFP14 ZFP14 zinc finger protein 1 1
MIRT608141 SYAP1 synapse associated protein 1 1 1
MIRT612620 RABL3 RAB, member of RAS oncogene family like 3 1 1
MIRT617444 CCS copper chaperone for superoxide dismutase 1 1
MIRT617552 MTO1 mitochondrial tRNA translation optimization 1 1 1
MIRT618772 HLA-E major histocompatibility complex, class I, E 1 1
MIRT618926 MEAF6 MYST/Esa1 associated factor 6 1 1
MIRT619247 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 1 1
MIRT620091 YME1L1 YME1 like 1 ATPase 1 1
MIRT620483 XKR6 XK related 6 1 1
MIRT620570 WBSCR27 methyltransferase like 27 1 2
MIRT622977 ORAI2 ORAI calcium release-activated calcium modulator 2 1 1
MIRT623169 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 1 1
MIRT624165 DGKE diacylglycerol kinase epsilon 1 1
MIRT625268 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 1 1
MIRT625396 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 1 1
MIRT625694 OPTN optineurin 1 1
MIRT626093 MKLN1 muskelin 1 1 1
MIRT626431 CHDH choline dehydrogenase 1 1
MIRT627013 FIG4 FIG4 phosphoinositide 5-phosphatase 1 1
MIRT627077 SF3A1 splicing factor 3a subunit 1 1 1
MIRT627140 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 1 1
MIRT627347 TSHZ2 teashirt zinc finger homeobox 2 1 1
MIRT627420 THAP2 THAP domain containing 2 1 1
MIRT627441 TAS2R5 taste 2 receptor member 5 1 1
MIRT628078 KAT7 lysine acetyltransferase 7 1 2
MIRT628276 CYB5D1 cytochrome b5 domain containing 1 1 1
MIRT629094 F2RL1 F2R like trypsin receptor 1 1 1
MIRT629236 CINP cyclin dependent kinase 2 interacting protein 1 1
MIRT629286 UNC13A unc-13 homolog A 1 1
MIRT629407 ADM2 adrenomedullin 2 1 1
MIRT629584 RFC2 replication factor C subunit 2 1 1
MIRT629635 WDR31 WD repeat domain 31 1 1
MIRT629874 NOM1 nucleolar protein with MIF4G domain 1 1 1
MIRT629984 NARS asparaginyl-tRNA synthetase 1 1
MIRT630043 TERF2 telomeric repeat binding factor 2 1 1
MIRT630061 NIP7 NIP7, nucleolar pre-rRNA processing protein 1 1
MIRT630127 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 1
MIRT630155 ZBTB8A zinc finger and BTB domain containing 8A 1 1
MIRT630252 SMTNL2 smoothelin like 2 1 1
MIRT630278 PSMB5 proteasome subunit beta 5 1 1
MIRT630347 NKAP NFKB activating protein 1 1
MIRT630497 CYP20A1 cytochrome P450 family 20 subfamily A member 1 1 1
MIRT631264 CENPM centromere protein M 1 1
MIRT631403 IL2RA interleukin 2 receptor subunit alpha 1 1
MIRT632470 RPS15A ribosomal protein S15a 1 1
MIRT632596 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 1 1
MIRT632994 DUSP18 dual specificity phosphatase 18 1 1
MIRT633082 CXorf21 chromosome X open reading frame 21 1 1
MIRT633239 ZNF573 zinc finger protein 573 1 1
MIRT633286 SLC1A5 solute carrier family 1 member 5 1 1
MIRT633536 PGBD5 piggyBac transposable element derived 5 1 1
MIRT634338 SGOL1 shugoshin 1 1 1
MIRT634600 KIAA1919 major facilitator superfamily domain containing 4B 1 1
MIRT635050 MYH11 myosin heavy chain 11 1 1
MIRT635236 QPRT quinolinate phosphoribosyltransferase 1 1
MIRT635322 BMS1 BMS1, ribosome biogenesis factor 1 1
MIRT636268 RNF157 ring finger protein 157 1 1
MIRT636450 LRCH3 leucine rich repeats and calponin homology domain containing 3 1 1
MIRT636516 FMN1 formin 1 1 1
MIRT636755 SLC16A5 solute carrier family 16 member 5 1 1
MIRT637134 BAMBI BMP and activin membrane bound inhibitor 1 1
MIRT637188 ROMO1 reactive oxygen species modulator 1 1 1
MIRT637287 IBA57 IBA57 homolog, iron-sulfur cluster assembly 1 1
MIRT637532 RGS9BP regulator of G protein signaling 9 binding protein 1 1
MIRT637693 CEP89 centrosomal protein 89 1 1
MIRT637788 OLA1 Obg like ATPase 1 1 1
MIRT637925 LILRA2 leukocyte immunoglobulin like receptor A2 1 1
MIRT638449 PLXDC2 plexin domain containing 2 1 1
MIRT640871 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 1 1
MIRT642643 PTGR2 prostaglandin reductase 2 1 1
MIRT643082 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT643123 FAM71F2 family with sequence similarity 71 member F2 1 1
MIRT644236 SLC35E3 solute carrier family 35 member E3 1 1
MIRT644665 TMCO1 transmembrane and coiled-coil domains 1 1 1
MIRT645092 SLC35E2B solute carrier family 35 member E2B 1 1
MIRT645993 ACP6 acid phosphatase 6, lysophosphatidic 1 1
MIRT646508 FAM217B family with sequence similarity 217 member B 1 1
MIRT647013 ADCY2 adenylate cyclase 2 1 1
MIRT647095 SEC23B Sec23 homolog B, coat complex II component 1 1
MIRT647714 NFX1 nuclear transcription factor, X-box binding 1 1 2
MIRT648040 FADS6 fatty acid desaturase 6 1 1
MIRT648510 PIGG phosphatidylinositol glycan anchor biosynthesis class G 1 1
MIRT648865 ABCA6 ATP binding cassette subfamily A member 6 1 1
MIRT649182 DNPEP aspartyl aminopeptidase 1 1
MIRT649660 TEP1 telomerase associated protein 1 1 1
MIRT651465 XIAP X-linked inhibitor of apoptosis 1 1
MIRT652398 TMEM40 transmembrane protein 40 1 1
MIRT653691 SLC25A33 solute carrier family 25 member 33 1 1
MIRT654122 RPS6KA5 ribosomal protein S6 kinase A5 1 1
MIRT654577 PXMP4 peroxisomal membrane protein 4 1 1
MIRT656470 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 1 1
MIRT658905 DPY19L4 dpy-19 like 4 1 1
MIRT660878 ADRBK2 G protein-coupled receptor kinase 3 1 2
MIRT661101 SPIB Spi-B transcription factor 1 1
MIRT661238 ARL17B ADP ribosylation factor like GTPase 17B 1 1
MIRT661291 LIN52 lin-52 DREAM MuvB core complex component 1 1
MIRT662235 PGBD4 piggyBac transposable element derived 4 1 1
MIRT662544 MTAP methylthioadenosine phosphorylase 1 1
MIRT662736 LRRC3C leucine rich repeat containing 3C 1 1
MIRT662844 OMD osteomodulin 1 1
MIRT662907 MED18 mediator complex subunit 18 1 1
MIRT662956 JPH2 junctophilin 2 1 1
MIRT663340 ZNF74 zinc finger protein 74 1 1
MIRT663496 IYD iodotyrosine deiodinase 1 1
MIRT663523 MASTL microtubule associated serine/threonine kinase like 1 1
MIRT663542 CCR6 C-C motif chemokine receptor 6 1 1
MIRT663903 MRI1 methylthioribose-1-phosphate isomerase 1 1 1
MIRT663973 ZNF786 zinc finger protein 786 1 1
MIRT664350 C16orf45 chromosome 16 open reading frame 45 1 1
MIRT664417 TIGD6 tigger transposable element derived 6 1 1
MIRT664468 ZYG11B zyg-11 family member B, cell cycle regulator 1 1
MIRT664957 PTCD3 pentatricopeptide repeat domain 3 1 1
MIRT664970 TDRD1 tudor domain containing 1 1 1
MIRT665199 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 1 1
MIRT665359 XKR4 XK related 4 1 1
MIRT665454 WDR17 WD repeat domain 17 1 1
MIRT665486 VPS53 VPS53, GARP complex subunit 1 1
MIRT666078 SSTR2 somatostatin receptor 2 1 1
MIRT666258 SLC31A1 solute carrier family 31 member 1 1 1
MIRT666324 SLC16A10 solute carrier family 16 member 10 1 1
MIRT666486 SBNO1 strawberry notch homolog 1 1 1
MIRT666696 RBM23 RNA binding motif protein 23 1 1
MIRT666712 RBL1 RB transcriptional corepressor like 1 1 1
MIRT666762 RAB10 RAB10, member RAS oncogene family 1 1
MIRT666931 PNRC1 proline rich nuclear receptor coactivator 1 1 1
MIRT667226 NFE2L1 nuclear factor, erythroid 2 like 1 1 1
MIRT667359 MPLKIP M-phase specific PLK1 interacting protein 1 1
MIRT667474 MAPK1 mitogen-activated protein kinase 1 1 1
MIRT667558 LRAT lecithin retinol acyltransferase 1 1
MIRT667748 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 1 1
MIRT668088 GMEB1 glucocorticoid modulatory element binding protein 1 1 1
MIRT668119 GK5 glycerol kinase 5 (putative) 1 1
MIRT668166 GDE1 glycerophosphodiester phosphodiesterase 1 1 1
MIRT668346 STXBP2 syntaxin binding protein 2 1 1
MIRT668509 ESYT2 extended synaptotagmin 2 1 1
MIRT669291 C17orf85 nuclear cap binding subunit 3 1 1
MIRT669547 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT669778 CNDP1 carnosine dipeptidase 1 1 1
MIRT669858 BROX BRO1 domain and CAAX motif containing 1 2
MIRT670017 TECPR1 tectonin beta-propeller repeat containing 1 1 1
MIRT670177 CCDC142 coiled-coil domain containing 142 1 1
MIRT671107 ZNF841 zinc finger protein 841 1 1
MIRT671351 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 1 1
MIRT671476 FLYWCH2 FLYWCH family member 2 1 1
MIRT671492 SLC38A9 solute carrier family 38 member 9 1 1
MIRT671554 LIMS1 LIM zinc finger domain containing 1 1 1
MIRT671925 PLEKHS1 pleckstrin homology domain containing S1 1 2
MIRT672196 F2 coagulation factor II, thrombin 1 1
MIRT672217 DCAF7 DDB1 and CUL4 associated factor 7 1 1
MIRT672252 SIK2 salt inducible kinase 2 1 1
MIRT672290 GP2 glycoprotein 2 1 1
MIRT672430 POLR2D RNA polymerase II subunit D 1 1
MIRT672597 NKPD1 NTPase KAP family P-loop domain containing 1 1 1
MIRT672901 KRBA2 KRAB-A domain containing 2 1 1
MIRT672958 ZNF655 zinc finger protein 655 1 1
MIRT673096 SYNPO2L synaptopodin 2 like 1 1
MIRT673171 TMEM56 transmembrane protein 56 1 1
MIRT673251 INO80 INO80 complex subunit 1 1
MIRT673296 RNF19B ring finger protein 19B 1 1
MIRT673574 KDELC2 KDEL motif containing 2 1 1
MIRT673586 KIF1C kinesin family member 1C 1 1
MIRT673737 TCF23 transcription factor 23 1 1
MIRT673767 MRPL17 mitochondrial ribosomal protein L17 1 1
MIRT674215 FAM120AOS family with sequence similarity 120A opposite strand 1 1
MIRT674283 NAGK N-acetylglucosamine kinase 1 1
MIRT674338 KCMF1 potassium channel modulatory factor 1 1 1
MIRT674517 PRR23A proline rich 23A 1 1
MIRT675100 SNTB2 syntrophin beta 2 1 1
MIRT675144 MOGAT1 monoacylglycerol O-acyltransferase 1 1 2
MIRT675223 CLK4 CDC like kinase 4 1 1
MIRT675263 ZNF431 zinc finger protein 431 1 1
MIRT675577 WWC1 WW and C2 domain containing 1 1 1
MIRT676025 C9orf69 transmembrane protein 250 1 1
MIRT676430 PLEKHM3 pleckstrin homology domain containing M3 1 1
MIRT676560 VSIG1 V-set and immunoglobulin domain containing 1 1 1
MIRT676596 ARIH2OS ariadne RBR E3 ubiquitin protein ligase 2 opposite strand 1 1
MIRT678576 TMEM168 transmembrane protein 168 1 1
MIRT678756 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 1 1
MIRT680344 ZNF281 zinc finger protein 281 1 1
MIRT680467 C3 complement C3 1 1
MIRT682826 FLG2 filaggrin family member 2 1 1
MIRT682881 SAR1A secretion associated Ras related GTPase 1A 1 1
MIRT684404 TMEM180 major facilitator superfamily domain containing 13A 1 1
MIRT685275 KIAA1143 KIAA1143 1 1
MIRT686061 KCNA7 potassium voltage-gated channel subfamily A member 7 1 1
MIRT687526 NASP nuclear autoantigenic sperm protein 1 1
MIRT691760 BCL2L15 BCL2 like 15 1 1
MIRT693890 C3orf62 chromosome 3 open reading frame 62 1 1
MIRT699342 SLC35E1 solute carrier family 35 member E1 1 1
MIRT699909 RUNDC1 RUN domain containing 1 1 1
MIRT700536 PTPDC1 protein tyrosine phosphatase domain containing 1 1 1
MIRT701807 MRPS25 mitochondrial ribosomal protein S25 1 1
MIRT702174 LYRM4 LYR motif containing 4 1 1
MIRT706205 ACOT9 acyl-CoA thioesterase 9 1 1
MIRT706659 RNF216 ring finger protein 216 1 1
MIRT706682 COL13A1 collagen type XIII alpha 1 chain 1 1
MIRT706705 GPR155 G protein-coupled receptor 155 1 1
MIRT706777 ANKRD36 ankyrin repeat domain 36 1 1
MIRT706844 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 1 1
MIRT706863 MAFF MAF bZIP transcription factor F 1 1
MIRT706896 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 1 1
MIRT706916 THAP6 THAP domain containing 6 1 1
MIRT706962 FANCC Fanconi anemia complementation group C 1 1
MIRT706980 XPO5 exportin 5 1 1
MIRT707015 RRP36 ribosomal RNA processing 36 1 1
MIRT707032 ACTR5 ARP5 actin related protein 5 homolog 1 1
MIRT707072 MED29 mediator complex subunit 29 1 1
MIRT709368 SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 1 1
MIRT720092 SPTLC3 serine palmitoyltransferase long chain base subunit 3 1 1
MIRT721330 IFNAR2 interferon alpha and beta receptor subunit 2 1 1
MIRT724198 MED7 mediator complex subunit 7 1 1
MIRT725403 KIF6 kinesin family member 6 1 1
Error report submission
MIRT ID*
Your e-Mail*
Memo*