miRTarBase - #MIRT618926 -
pre-miRNA Information
pre-miRNA hsa-mir-122   
Genomic Coordinates chr18: 58451074 - 58451158
Synonyms MIR122A, MIRN122, MIRN122A, hsa-mir-122, miRNA122, miRNA122A, MIR122
Description Homo sapiens miR-122 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-122-5p
Sequence 15| UGGAGUGUGACAAUGGUGUUUG |36
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 18 + 58451091 29233923 MiREDiBase
C-to-U 11 18 + 58451098 28550310 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1258166649 1 dbSNP
rs1426570658 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles

Circulating MicroRNA Expression Profiling
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MEAF6   
Synonyms C1orf149, CENP-28, EAF6, NY-SAR-91
Description MYST/Esa1 associated factor 6
Transcript NM_022756   
Expression
Putative miRNA Targets on MEAF6
3'UTR of MEAF6
(miRNA target sites are highlighted)
>MEAF6|NM_022756|3'UTR
   1 AAGACACATTAGTGCAGAAGCTTCCAGGCTGTAGAGCCCTGCTTCCCTTCTCTGACCTCACAAAGATAAACATCCTTCAC
  81 CTGAGTTCGTGGCCATCCACCTCTGCTCTCCCAGACCCAGTGCCTGTGACTTTGAGTAGTTTGTTCTAAATGTGGTGACA
 161 AACAAGTCATTTCTGTAAGACATTGGGTCTTACTTTATGTCATTTTTAGTAACAGAACTGCAGGAAGATGAAGACAATGT
 241 TGTAATCCCAGCAAGTTGCTAACTGTGCGTTTCTCCCTTCTTAGAATGAATGTCTCCCCCAAAACTGGCTGGCACCAGCT
 321 TCATCTGTGATACCCTTCAAGAAATGTTCTCTGGTTTTGTTTTATGCTGAAAGTAGAACACAAGTCACATTTCAGATGGA
 401 GGCTGTAAATATCTGGCATTTTCTTATATTGTTTTATGTTTTCTTGTTTTTCTCTTGTTGTTTTTATCTTATTTTCTTTG
 481 GGGTTTTTTTGTAATGCCTTTGTACAGCTCATACTTTCCTGCTGACATATCTGATCATCTCTTTCATGCAGTTGCCAATA
 561 TTCATAACTGAAAATAATCTGGTTTATCATAAGTAAAATGGGAAACTTGCCTCTGTTTTTTGCAAGGGGAGGTAAAGAGT
 641 GTTTAGTAATTACCTATCTTAAATCTTTCTGAGTTGGTAGTAGATTCATGTTCAAGGAACAGGAAAAATGGAAAAACATA
 721 AGTTTAAATCAGTTCTTTTTAAATAACTTTTTATTCTTTTGTATAAATAAAATTTCACAGGCTTCAAATTCTCATGCTTT
 801 ACTTTTAAACCCGAGATTGTTTTTTCACTTATTTATTCATATCATGCCTTATGGAAATTTCTTTTTCTGTATTTTCTCTC
 881 TTTGCTGGTATTCACCTGATTAAATATTGCTCTAAAAATCACCATGGCATATGGAAAGTCTCAAAATTATACCAAAAGTG
 961 ATAACTTATGTCGTTCTTAAGTGGAGTGAAAGGATAGCATCAGTGAGAGCCAGTGTTGCCCACCAGGTCTCCCTTTCTTG
1041 GAGGGCTTGTTGGGGCTGAGGAATCTGCTAGTAATCGTTACCTGCCTCTAGTGCTGTGGTGAACTTGCGACAGGGTCTGG
1121 CTGCACATTGGAATCACCTGAGAAGCTTTAAAATACTCATGCCTGGATCCCATCCCTAGAGACTGGGGTACAGCCTAGTT
1201 ATTGGGAATTTCTTTAAAAGAGTTCCTGGGATTCTGATAAGAAGCCAGGTTGAGAACCACTACATTAGAAGACTGAATGG
1281 TTTAATTTACATCCTATGTTATGATTGGTCTAAGGGATAAGATTTGGGGTCTAACCTTTCCTTTCACTCTAGTTAGTCAT
1361 AGTCCTTGACTTATGCCTATATCTTTGTAAGAAATAGTATGTTTCATTTGTGATAGTATTGGTAGGGCTGAATATGGATG
1441 GCATCTACTGTAAAACAAGTCTACCTTGTCAGATGTGCAAAAGCTTTCACTCTTGTTCTCAAATAAACTTTTGTGGGTTT
1521 TTTTTTTTTTTTTTTTTTGACTCTGGCTATTTAGATCTTTGACTGTGTCTTTGGTAGCAGAACTCCAGTGTCAGGATTTT
1601 TAAGGAAATAGTTTCTTATATTTAGATTATTCCTTAAAAAAAAAAATCCTAGAAGCATTCTGTATTTTTTGTCTGTTGGT
1681 CTCCTTTGCTGGGAGGGAGGAGTGGGATGCCTACAGTTTCCTTCCTTTTGGGGAAAGCACACAGCAGACCTTAAAATATT
1761 TTTGACTCTTGGGCTGGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAAGCGGGCGGATCACGAGGT
1841 CAGGAGATCGAGACCATCCTGGCGAACACAGTGAAACCCCATCTCTACTAAAAATGCAAAAAATTAGCTGAGCGTGGTGG
1921 CGGGTGCCGGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTACAGTGAGC
2001 TGAGATAGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAATATTTTTGACTCTTAA
2081 CAGTTTGAGATTGCTAGAGATGGAATAGTACTGCTCTGTTGCGCCACTGCACTCCAGCAGCCTGGGCGACAGAGCGAGAC
2161 TCTGTCAAAAAAAAAAAAAAAAAGAAAGAATAGTACTGCTCTTAAAAAGATTATTTACGTATTTATGAAACTGCAGTGGG
2241 ATGCCTAGTTTCCTTCCCTCTGAGGAAAGCACACAGCAGACCTTAAAATATTTTTGACTCTCATAGTTTGACATTGCTGG
2321 AGACAGAATAGTACTGCTCTTAAAAAGATTATTTAAGTATTTATATATTTTATTTATTTATTTATTTATTTATTTATTTA
2401 TTGACAGGATCTTGCTCTGTCACCCAGGCTGGAGTGCAGCGGCCTGATCAAAGCTCAGTGCAGCCTCGAACTTCTGGGGT
2481 CAAGCCATCTTCCTGCTTCAGCCTTACTAGTACCTGGGACTATAGGTGCATGCCACCATTCCCAGCTAATTTAAAACATT
2561 TTTATTTTGTAATGATGGCTTCTTGCTATGTTGCCCAGGCTGGCCTCAAGCAGTCCTCCTGGCCTCAAGCAGTCCTTCTG
2641 CCTTGGCCTCCCAAAGTGCTGGGATTATAGGTATCAAGCAATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGG
2721 CATGCACCACCATGCCCATCTAAGTTTTGTATTTTTAGTGGAGATGGGGTTTTGCCATGATGGGCAGGCTGGTCTCGAAC
2801 TCCTGACCTCAGGTAATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCCTGGCACCTGGCAATAT
2881 AGAGTATTCTTGACATCTTGACCTGTGCAGTAAAGAAGATAATTAAAATGAGCGATAAATAGTCTAAGCTTGAAAGTTAA
2961 AGAGCCTAAGCTTGAAACACTCTGTGACTTAGTTTTTGCATTTATTCTGTCTTCTATGCCCCCCAACCTTACTCCAAATT
3041 AATGAGGCATTATTTTATTTATTTATTTTTTTGAGACAGAGTCTTGCTCTGTCGTCCAGGCTGGAGTGCAGTGGCACAAT
3121 CTTGGCTCACTGCTACCTCCGCCTCCAGGGTTCAAGCAATTATTCCGCCTCAGCCTCTCGAGTAGCTGAGACTACAGGCG
3201 CGTGCTACCACACCCAGCTAGTTTTTTTTTATTTTCAATAGAGACCGGGTTTCACCATATTGGCCAGGCTGGACTCAAAC
3281 TCCTGACTTCGTAATCCACCTGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTGCACCCGGCCTAATGA
3361 GGCATTATTGCTTAAAAATTCACATCAAGCTGGGCATGGTGATATGCACCTTTAGTCCCAGCTGCTTGGGAGGCTTAGAG
3441 GCAGCAGGATCGCTTGAAGCCAGAAGTTCAAGGCTACAGTATGCTATGATCATTTCTGTGAATGGCCACTGCACTTCAGC
3521 CTGAGTAACGTAGCAAGACGCTGTCTCCAACAGAAAATTGACATCTGAAGCCTTGACTACAGGGGGACTATACTGGTTTA
3601 TGTGAAGTGTGGGGAGAGAGCAGGATTGTGCTTCTTTGTACACATTTGCTTCTCCCAGGATAGTGTCATAGTGCCTAGGA
3681 AGGTGATGTGTGTGTCAGATACAATGATAGTGAAAAGAAGGGATTGGAATTTTCATACCTGTGTCAGTCTAAATGAGCAT
3761 TACCTTGTCTGAATTGTCTAAGTGGTAAGCTTCGTGATTTGAAACAGTTTTCACTTTGAAAAACTGCTTCCGTGGATTAA
3841 AAGTTGTCACCACTAAAGTGGGCTGTGGTGGAGTCGATGCTGATCCTCACTTAGGGCAGTGGCCTCCAAGGGGAAGAGGG
3921 CACACAGGATGGCTGGGTGGGGGTGGGAAGAAAAGATTAGGCCTTTGATTTATATTCATTTTGAGGCTCAGCCTTATTTA
4001 GTTTCTCACTTTGGATGTATTTTATATATATACATCAAATATACATCAATATTAGTTCATTAGTACATGTAGGTCATTAA
4081 TTTATAAATAAAAGGTTGAACCACAATAAACTGCTGATAATTGTTTTTGATCTGTAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
IDDuplex structurePositionScoreMFE
1
miRNA  3' guUUGUGGUAACAGUGUGAGGu 5'
            ||||| |  ||||||:|:| 
Target 5' agAACACAA--GTCACATTTCa 3'
375 - 394 140.00 -19.20
2
miRNA  3' guUUGUGGUAACAGUGUGAGGu 5'
            |:::||| |   :|||||| 
Target 5' atAGTGCCACT---GCACTCCa 3'
2005 - 2023 137.00 -16.10
3
miRNA  3' guuUGUGGUAACAGUGUGAGGu 5'
             :|:||| |   :|||||| 
Target 5' gttGCGCCACT---GCACTCCa 3'
2118 - 2136 136.00 -17.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN23014342 10 COSMIC
COSN30534586 26 COSMIC
COSN30127255 36 COSMIC
COSN26984069 57 COSMIC
COSN30508094 85 COSMIC
COSN26984070 88 COSMIC
COSN31589695 89 COSMIC
COSN30472643 154 COSMIC
COSN6035083 170 COSMIC
COSN30139655 178 COSMIC
COSN15315235 201 COSMIC
COSN23014341 250 COSMIC
COSN13542281 256 COSMIC
COSN31603345 268 COSMIC
COSM6024704 294 COSMIC
COSM5561778 299 COSMIC
COSN31583153 341 COSMIC
COSN5168234 354 COSMIC
COSN28201946 418 COSMIC
COSN31596738 430 COSMIC
COSN31521054 465 COSMIC
COSN30119710 483 COSMIC
COSN1103849 557 COSMIC
COSN25762871 1041 COSMIC
COSN5168233 1061 COSMIC
COSN8638263 1360 COSMIC
COSN31588779 1387 COSMIC
COSN26574170 1465 COSMIC
COSN8638262 1513 COSMIC
rs9253 887 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1440109247 4 dbSNP
rs892104363 7 dbSNP
rs1486335552 8 dbSNP
rs770846243 10 dbSNP
rs1351015226 12 dbSNP
rs200096904 12 dbSNP
rs200633970 13 dbSNP
rs777119753 21 dbSNP
rs755824900 22 dbSNP
rs1225891061 24 dbSNP
rs752245969 25 dbSNP
rs376707573 26 dbSNP
rs1234144174 28 dbSNP
rs755329017 39 dbSNP
rs751709905 40 dbSNP
rs746634746 42 dbSNP
rs1429894992 45 dbSNP
rs1345762287 50 dbSNP
rs1435627085 56 dbSNP
rs1203782828 63 dbSNP
rs1251779537 66 dbSNP
rs372584814 83 dbSNP
rs867431615 88 dbSNP
rs1265942904 91 dbSNP
rs907890022 95 dbSNP
rs1159237087 99 dbSNP
rs926443962 103 dbSNP
rs1218011058 107 dbSNP
rs1307468941 111 dbSNP
rs987771857 112 dbSNP
rs1488143490 120 dbSNP
rs578261348 134 dbSNP
rs1411597996 146 dbSNP
rs1310922250 155 dbSNP
rs980641973 162 dbSNP
rs1221095755 166 dbSNP
rs1029354500 169 dbSNP
rs1285643255 169 dbSNP
rs930456259 193 dbSNP
rs556785483 196 dbSNP
rs215212 201 dbSNP
rs1021292543 203 dbSNP
rs190548739 209 dbSNP
rs1359590557 213 dbSNP
rs1442267112 215 dbSNP
rs1188656208 220 dbSNP
rs891437108 228 dbSNP
rs215211 230 dbSNP
rs536364192 231 dbSNP
rs751969532 235 dbSNP
rs1390865490 236 dbSNP
rs779455251 236 dbSNP
rs1171413948 237 dbSNP
rs1320025815 238 dbSNP
rs1403459437 239 dbSNP
rs767051370 240 dbSNP
rs1452046896 248 dbSNP
rs186893691 249 dbSNP
rs215210 250 dbSNP
rs762115268 251 dbSNP
rs763272914 254 dbSNP
rs532273657 255 dbSNP
rs200212339 256 dbSNP
rs1243269442 257 dbSNP
rs770945380 258 dbSNP
rs182535367 259 dbSNP
rs772804692 260 dbSNP
rs765798988 266 dbSNP
rs769131530 267 dbSNP
rs757941814 268 dbSNP
rs996998734 268 dbSNP
rs747844219 269 dbSNP
rs781059959 274 dbSNP
rs549550813 275 dbSNP
rs899338038 281 dbSNP
rs1037761432 283 dbSNP
rs1214511332 286 dbSNP
rs1240695218 287 dbSNP
rs369091863 294 dbSNP
rs375890810 297 dbSNP
rs1188237300 298 dbSNP
rs1443213988 299 dbSNP
rs780534754 301 dbSNP
rs1451458943 302 dbSNP
rs553543805 312 dbSNP
rs892136201 314 dbSNP
rs1271788829 316 dbSNP
rs1299681096 317 dbSNP
rs1229016284 318 dbSNP
rs561158420 325 dbSNP
rs776534016 327 dbSNP
rs1386188601 330 dbSNP
rs1393409025 333 dbSNP
rs939030198 334 dbSNP
rs904979157 340 dbSNP
rs1462675989 341 dbSNP
rs776792685 346 dbSNP
rs1051756374 351 dbSNP
rs933352814 359 dbSNP
rs930487379 361 dbSNP
rs542714132 362 dbSNP
rs921871988 365 dbSNP
rs1409975847 368 dbSNP
rs1421043654 376 dbSNP
rs761290329 378 dbSNP
rs1277113629 381 dbSNP
rs1268417200 387 dbSNP
rs372931847 396 dbSNP
rs1208471346 397 dbSNP
rs975069982 398 dbSNP
rs1449921946 414 dbSNP
rs1208235373 426 dbSNP
rs1266778677 427 dbSNP
rs968490799 433 dbSNP
rs1433777330 436 dbSNP
rs1200997317 443 dbSNP
rs879650934 447 dbSNP
rs1472171342 452 dbSNP
rs755966573 453 dbSNP
rs972018974 459 dbSNP
rs372276645 463 dbSNP
rs375150988 463 dbSNP
rs940563596 472 dbSNP
rs556204268 482 dbSNP
rs1035880398 483 dbSNP
rs987238707 484 dbSNP
rs970129693 491 dbSNP
rs1349136624 493 dbSNP
rs1023854438 505 dbSNP
rs955361018 513 dbSNP
rs1473302501 515 dbSNP
rs1242887435 517 dbSNP
rs148567480 518 dbSNP
rs1488881329 521 dbSNP
rs975443776 529 dbSNP
rs899308480 533 dbSNP
rs560280977 536 dbSNP
rs968198626 545 dbSNP
rs1022849329 558 dbSNP
rs1005084386 560 dbSNP
rs886517935 564 dbSNP
rs1421768056 580 dbSNP
rs879575750 586 dbSNP
rs1368658277 589 dbSNP
rs1459028610 603 dbSNP
rs1166205151 609 dbSNP
rs1369348152 618 dbSNP
rs1052321585 622 dbSNP
rs1259016079 623 dbSNP
rs1394641311 641 dbSNP
rs545458244 649 dbSNP
rs1198088827 654 dbSNP
rs578245567 656 dbSNP
rs1248401472 657 dbSNP
rs1272603462 658 dbSNP
rs957218524 663 dbSNP
rs1253863567 668 dbSNP
rs1035272996 679 dbSNP
rs1270733774 689 dbSNP
rs556922546 690 dbSNP
rs1181034402 693 dbSNP
rs1229986022 700 dbSNP
rs1356699819 704 dbSNP
rs190621466 708 dbSNP
rs1186215325 728 dbSNP
rs1044856243 735 dbSNP
rs1378646570 743 dbSNP
rs1169847707 744 dbSNP
rs914516966 756 dbSNP
rs1464894842 760 dbSNP
rs994560793 761 dbSNP
rs1331666090 768 dbSNP
rs1302667915 773 dbSNP
rs988594772 776 dbSNP
rs1454796802 778 dbSNP
rs1295596165 781 dbSNP
rs751096188 787 dbSNP
rs536440565 794 dbSNP
rs1036643801 797 dbSNP
rs796866369 806 dbSNP
rs969721845 813 dbSNP
rs1023072027 816 dbSNP
rs1256378525 829 dbSNP
rs775615648 832 dbSNP
rs1186354461 838 dbSNP
rs995195611 838 dbSNP
rs963611311 841 dbSNP
rs1016560663 842 dbSNP
rs1162046948 843 dbSNP
rs144488342 848 dbSNP
rs770738677 852 dbSNP
rs886610386 857 dbSNP
rs1238993603 882 dbSNP
rs368953618 882 dbSNP
rs934010387 883 dbSNP
rs921233956 884 dbSNP
rs9253 887 dbSNP
rs900606211 894 dbSNP
rs968063325 895 dbSNP
rs915328969 904 dbSNP
rs1318837218 907 dbSNP
rs988750713 909 dbSNP
rs1436034708 928 dbSNP
rs956883115 929 dbSNP
rs947423340 937 dbSNP
rs186240482 942 dbSNP
rs1289141146 955 dbSNP
rs1325492482 963 dbSNP
rs1003774584 964 dbSNP
rs1206565741 966 dbSNP
rs10489523 968 dbSNP
rs1267147669 968 dbSNP
rs934475634 969 dbSNP
rs553481841 972 dbSNP
rs538281919 973 dbSNP
rs948456702 974 dbSNP
rs1426472811 977 dbSNP
rs774779789 984 dbSNP
rs1370456870 990 dbSNP
rs1294787962 995 dbSNP
rs1457975829 997 dbSNP
rs1062340 1007 dbSNP
rs915692905 1014 dbSNP
rs1348278244 1016 dbSNP
rs1436648348 1018 dbSNP
rs1349808060 1019 dbSNP
rs1347289726 1022 dbSNP
rs973726942 1023 dbSNP
rs1287516282 1028 dbSNP
rs1329531469 1031 dbSNP
rs1225121785 1034 dbSNP
rs1287302413 1038 dbSNP
rs1320657957 1040 dbSNP
rs1221616631 1049 dbSNP
rs1270359414 1052 dbSNP
rs571187996 1054 dbSNP
rs149683702 1060 dbSNP
rs531517737 1064 dbSNP
rs1421886949 1074 dbSNP
rs1470713794 1075 dbSNP
rs1381347145 1076 dbSNP
rs1158200892 1077 dbSNP
rs1411868480 1088 dbSNP
rs1404880378 1092 dbSNP
rs1219485375 1097 dbSNP
rs1417568856 1108 dbSNP
rs1367476717 1113 dbSNP
rs994502024 1115 dbSNP
rs898949235 1118 dbSNP
rs1407937452 1122 dbSNP
rs1307269415 1125 dbSNP
rs7534044 1127 dbSNP
rs1444098355 1130 dbSNP
rs1005145474 1131 dbSNP
rs890269967 1133 dbSNP
rs1355240239 1144 dbSNP
rs1052127573 1145 dbSNP
rs1488219811 1158 dbSNP
rs1339357994 1160 dbSNP
rs775399455 1161 dbSNP
rs931864296 1161 dbSNP
rs1438804923 1165 dbSNP
rs1184387044 1170 dbSNP
rs1268067337 1171 dbSNP
rs1472605396 1180 dbSNP
rs549206961 1185 dbSNP
rs1489126078 1188 dbSNP
rs1167951717 1189 dbSNP
rs1371067852 1190 dbSNP
rs950887019 1191 dbSNP
rs1039721300 1201 dbSNP
rs1339587681 1205 dbSNP
rs997721602 1211 dbSNP
rs1316711549 1216 dbSNP
rs1362472308 1219 dbSNP
rs1226996925 1220 dbSNP
rs900573956 1225 dbSNP
rs1340710004 1226 dbSNP
rs1198030845 1227 dbSNP
rs182088724 1228 dbSNP
rs376753608 1240 dbSNP
rs1442144578 1245 dbSNP
rs12144938 1249 dbSNP
rs1245193277 1252 dbSNP
rs545396560 1252 dbSNP
rs1447772818 1259 dbSNP
rs1187975142 1260 dbSNP
rs1373683057 1264 dbSNP
rs533335622 1284 dbSNP
rs1170686116 1286 dbSNP
rs1401307600 1289 dbSNP
rs1303043519 1294 dbSNP
rs893144940 1297 dbSNP
rs1385964541 1302 dbSNP
rs1052938274 1310 dbSNP
rs12133933 1311 dbSNP
rs907141644 1327 dbSNP
rs1230277130 1328 dbSNP
rs1366353289 1333 dbSNP
rs1273565491 1337 dbSNP
rs935517993 1341 dbSNP
rs1224469481 1342 dbSNP
rs1265281560 1358 dbSNP
rs1463741112 1359 dbSNP
rs114745536 1361 dbSNP
rs574281976 1369 dbSNP
rs1448802505 1374 dbSNP
rs1402398136 1375 dbSNP
rs1376969195 1379 dbSNP
rs982369064 1387 dbSNP
rs1178349790 1393 dbSNP
rs1409439877 1396 dbSNP
rs770912687 1398 dbSNP
rs969589339 1405 dbSNP
rs1456381794 1420 dbSNP
rs948616521 1426 dbSNP
rs1297956475 1435 dbSNP
rs1322186968 1436 dbSNP
rs559412383 1437 dbSNP
rs1406032232 1448 dbSNP
rs973094049 1449 dbSNP
rs1327455867 1452 dbSNP
rs1228080760 1462 dbSNP
rs1261528132 1473 dbSNP
rs963057642 1475 dbSNP
rs1208115924 1478 dbSNP
rs1015104922 1483 dbSNP
rs1266701472 1490 dbSNP
rs1490502375 1492 dbSNP
rs1201411727 1495 dbSNP
rs1249366025 1504 dbSNP
rs892967181 1504 dbSNP
rs1159466451 1508 dbSNP
rs1472133952 1508 dbSNP
rs1177133086 1509 dbSNP
rs1455974119 1511 dbSNP
rs1004606266 1512 dbSNP
rs879215785 1513 dbSNP
rs1241634204 1516 dbSNP
rs1213723473 1517 dbSNP
rs890292035 1518 dbSNP
rs1030080415 1519 dbSNP
rs995961237 1521 dbSNP
rs1478774519 1523 dbSNP
rs1263876003 1527 dbSNP
rs1204294603 1529 dbSNP
rs1484807799 1538 dbSNP
rs1224701782 1539 dbSNP
rs1293059615 1539 dbSNP
rs1337778291 1539 dbSNP
rs1360182059 1539 dbSNP
rs35527783 1539 dbSNP
rs771692554 1539 dbSNP
rs878918469 1539 dbSNP
rs878940127 1539 dbSNP
rs908222933 1539 dbSNP
rs940973893 1539 dbSNP
rs1245745901 1540 dbSNP
rs1491525021 1540 dbSNP
rs1461878900 1541 dbSNP
rs1299130959 1544 dbSNP
rs1257379410 1545 dbSNP
rs1399002919 1555 dbSNP
rs746993658 1559 dbSNP
rs1314615229 1561 dbSNP
rs1383704129 1566 dbSNP
rs951018265 1566 dbSNP
rs1295376734 1572 dbSNP
rs1306865876 1575 dbSNP
rs1205080903 1579 dbSNP
rs1252854871 1580 dbSNP
rs1482147709 1582 dbSNP
rs1199591561 1588 dbSNP
rs372167950 1607 dbSNP
rs976652067 1618 dbSNP
rs1186150509 1625 dbSNP
rs1388970392 1632 dbSNP
rs1219992663 1636 dbSNP
rs1428447786 1636 dbSNP
rs1017608789 1647 dbSNP
rs573270898 1647 dbSNP
rs1464853284 1654 dbSNP
rs1011629188 1656 dbSNP
rs1407081123 1665 dbSNP
rs778587426 1672 dbSNP
rs540467289 1679 dbSNP
rs1361275095 1683 dbSNP
rs1381816599 1684 dbSNP
rs1303576035 1688 dbSNP
rs779522915 1697 dbSNP
rs1042943780 1706 dbSNP
rs572032113 1707 dbSNP
rs946744008 1711 dbSNP
rs1297637547 1714 dbSNP
rs893785318 1715 dbSNP
rs201503779 1716 dbSNP
rs1403937764 1733 dbSNP
rs998896310 1735 dbSNP
rs1222654062 1737 dbSNP
rs1466242633 1737 dbSNP
rs553480793 1738 dbSNP
rs1192450208 1740 dbSNP
rs1246897546 1744 dbSNP
rs1485901024 1749 dbSNP
rs1187683942 1759 dbSNP
rs1045689588 1760 dbSNP
rs1431848420 1778 dbSNP
rs1176185898 1779 dbSNP
rs192418576 1781 dbSNP
rs1471078848 1782 dbSNP
rs928126000 1797 dbSNP
rs529828428 1800 dbSNP
rs1290612899 1812 dbSNP
rs948188195 1819 dbSNP
rs1240935443 1820 dbSNP
rs1199981304 1824 dbSNP
rs577183830 1825 dbSNP
rs1226251390 1828 dbSNP
rs1318073514 1828 dbSNP
rs186038731 1829 dbSNP
rs1317029647 1831 dbSNP
rs1217281342 1832 dbSNP
rs1225885412 1833 dbSNP
rs1323839231 1834 dbSNP
rs779219315 1835 dbSNP
rs1313911449 1836 dbSNP
rs1199237087 1838 dbSNP
rs1270064116 1841 dbSNP
rs1452429645 1845 dbSNP
rs879563145 1849 dbSNP
rs1333694257 1850 dbSNP
rs963386393 1862 dbSNP
rs537746680 1863 dbSNP
rs1348133883 1864 dbSNP
rs983606665 1866 dbSNP
rs1303676891 1869 dbSNP
rs941109938 1877 dbSNP
rs954521912 1878 dbSNP
rs1407733718 1883 dbSNP
rs1030031533 1885 dbSNP
rs1278639366 1887 dbSNP
rs908317592 1889 dbSNP
rs1047160669 1895 dbSNP
rs1287135155 1896 dbSNP
rs1460429103 1901 dbSNP
rs1222471808 1904 dbSNP
rs1293105312 1913 dbSNP
rs995997187 1914 dbSNP
rs900326989 1917 dbSNP
rs1165181226 1920 dbSNP
rs976368076 1921 dbSNP
rs1021516847 1922 dbSNP
rs964819823 1924 dbSNP
rs1382992972 1928 dbSNP
rs755403823 1929 dbSNP
rs1457769431 1930 dbSNP
rs1427685123 1931 dbSNP
rs567591235 1935 dbSNP
rs1052407742 1937 dbSNP
rs1354830221 1942 dbSNP
rs796480419 1943 dbSNP
rs990301005 1945 dbSNP
rs1194534795 1946 dbSNP
rs906644319 1949 dbSNP
rs957439172 1953 dbSNP
rs1316476222 1964 dbSNP
rs754332929 1970 dbSNP
rs1245692895 1984 dbSNP
rs1272760608 1985 dbSNP
rs1438740259 2007 dbSNP
rs1206972627 2018 dbSNP
rs181494352 2024 dbSNP
rs534017942 2031 dbSNP
rs1387122430 2032 dbSNP
rs971426402 2034 dbSNP
rs1024610818 2038 dbSNP
rs916720755 2039 dbSNP
rs1241152026 2040 dbSNP
rs1037963946 2042 dbSNP
rs1326915284 2043 dbSNP
rs942256223 2048 dbSNP
rs75481897 2052 dbSNP
rs566569516 2060 dbSNP
rs1038193868 2063 dbSNP
rs1216667603 2064 dbSNP
rs1261605389 2065 dbSNP
rs200632365 2065 dbSNP
rs908114965 2065 dbSNP
rs1392793685 2067 dbSNP
rs1303751099 2069 dbSNP
rs189160070 2076 dbSNP
rs1383162886 2079 dbSNP
rs1476325023 2079 dbSNP
rs1174037667 2083 dbSNP
rs954515972 2092 dbSNP
rs1046812239 2096 dbSNP
rs1178126948 2097 dbSNP
rs1382230010 2105 dbSNP
rs1381133548 2108 dbSNP
rs933615911 2111 dbSNP
rs922305117 2112 dbSNP
rs780369801 2114 dbSNP
rs1433454811 2116 dbSNP
rs1041003257 2122 dbSNP
rs547717923 2123 dbSNP
rs1265225834 2124 dbSNP
rs1348679009 2142 dbSNP
rs1204656891 2146 dbSNP
rs1285000555 2147 dbSNP
rs1448670121 2150 dbSNP
rs1197123402 2155 dbSNP
rs1267988370 2156 dbSNP
rs1179008453 2164 dbSNP
rs1434465158 2165 dbSNP
rs1268649150 2166 dbSNP
rs1222416061 2167 dbSNP
rs1361682491 2167 dbSNP
rs1452540564 2170 dbSNP
rs533472682 2179 dbSNP
rs943604797 2180 dbSNP
rs1422071586 2181 dbSNP
rs1168160086 2184 dbSNP
rs1285533828 2184 dbSNP
rs1301818601 2184 dbSNP
rs1345347649 2184 dbSNP
rs1405897307 2184 dbSNP
rs1352920184 2185 dbSNP
rs910833177 2186 dbSNP
rs1489941922 2187 dbSNP
rs1224472147 2188 dbSNP
rs990270108 2188 dbSNP
rs1288637381 2191 dbSNP
rs1418153873 2196 dbSNP
rs113905307 2198 dbSNP
rs1182011439 2200 dbSNP
rs923049816 2207 dbSNP
rs974442131 2208 dbSNP
rs1350194262 2212 dbSNP
rs1278072981 2213 dbSNP
rs1235501256 2218 dbSNP
rs964529148 2219 dbSNP
rs1394718328 2223 dbSNP
rs1391100989 2256 dbSNP
rs977542057 2257 dbSNP
rs1379263345 2266 dbSNP
rs1021380947 2267 dbSNP
rs765486176 2285 dbSNP
rs1314408517 2291 dbSNP
rs1404291282 2300 dbSNP
rs1247995210 2322 dbSNP
rs6700586 2324 dbSNP
rs956022358 2329 dbSNP
rs1024329184 2333 dbSNP
rs1401113424 2334 dbSNP
rs1196327334 2342 dbSNP
rs150118113 2356 dbSNP
rs140402807 2357 dbSNP
rs1031992980 2359 dbSNP
rs999556693 2361 dbSNP
rs1156502677 2363 dbSNP
rs1385243690 2365 dbSNP
rs544196095 2365 dbSNP
rs1467076314 2367 dbSNP
rs1461770554 2368 dbSNP
rs1377698564 2370 dbSNP
rs1402761075 2372 dbSNP
rs906508358 2372 dbSNP
rs1336164892 2373 dbSNP
rs1383542475 2376 dbSNP
rs958601072 2379 dbSNP
rs1293341753 2381 dbSNP
rs1306743642 2390 dbSNP
rs551043797 2393 dbSNP
rs1005347898 2394 dbSNP
rs1025784861 2403 dbSNP
rs1184154537 2403 dbSNP
rs1243286722 2403 dbSNP
rs1487756976 2403 dbSNP
rs150718372 2403 dbSNP
rs57369458 2403 dbSNP
rs886953165 2403 dbSNP
rs763704851 2404 dbSNP
rs1175958823 2405 dbSNP
rs1266029881 2415 dbSNP
rs183992173 2423 dbSNP
rs562442167 2424 dbSNP
rs1287091720 2429 dbSNP
rs765708944 2431 dbSNP
rs373813468 2437 dbSNP
rs1282356122 2439 dbSNP
rs540449287 2440 dbSNP
rs762659825 2441 dbSNP
rs1039357982 2442 dbSNP
rs1222599172 2443 dbSNP
rs942404032 2457 dbSNP
rs1313492118 2461 dbSNP
rs575583535 2463 dbSNP
rs1343529872 2464 dbSNP
rs1054638537 2466 dbSNP
rs1485828595 2467 dbSNP
rs1048430395 2468 dbSNP
rs564356699 2473 dbSNP
rs1431180391 2480 dbSNP
rs1325652121 2481 dbSNP
rs1430213642 2484 dbSNP
rs181412934 2485 dbSNP
rs765108648 2492 dbSNP
rs764237966 2504 dbSNP
rs12759356 2506 dbSNP
rs1454302161 2520 dbSNP
rs1299961080 2522 dbSNP
rs1343456406 2528 dbSNP
rs776570485 2531 dbSNP
rs974473282 2532 dbSNP
rs917352476 2533 dbSNP
rs964391432 2550 dbSNP
rs544982471 2551 dbSNP
rs914321098 2555 dbSNP
rs1218071882 2559 dbSNP
rs1467838667 2560 dbSNP
rs990033695 2572 dbSNP
rs958696041 2575 dbSNP
rs956047866 2578 dbSNP
rs1169016185 2585 dbSNP
rs561981630 2588 dbSNP
rs1479138305 2597 dbSNP
rs1031605989 2611 dbSNP
rs1175692326 2619 dbSNP
rs1016825793 2624 dbSNP
rs1419720497 2633 dbSNP
rs1189820266 2637 dbSNP
rs555729661 2647 dbSNP
rs1003174203 2654 dbSNP
rs1201846886 2655 dbSNP
rs1303540964 2658 dbSNP
rs1351343228 2677 dbSNP
rs1439643444 2681 dbSNP
rs573018842 2684 dbSNP
rs1025457105 2701 dbSNP
rs1241650583 2705 dbSNP
rs970724733 2708 dbSNP
rs1312216047 2711 dbSNP
rs1357964426 2712 dbSNP
rs998455350 2719 dbSNP
rs1453683422 2720 dbSNP
rs900912184 2721 dbSNP
rs1232501560 2722 dbSNP
rs1458347574 2724 dbSNP
rs1018018494 2730 dbSNP
rs1259846671 2730 dbSNP
rs1024939262 2737 dbSNP
rs1164116519 2742 dbSNP
rs770733974 2748 dbSNP
rs1012250066 2749 dbSNP
rs1169362169 2757 dbSNP
rs189141246 2769 dbSNP
rs1038176656 2776 dbSNP
rs1334125049 2777 dbSNP
rs1381389870 2780 dbSNP
rs1006414279 2784 dbSNP
rs1452637860 2792 dbSNP
rs886585746 2796 dbSNP
rs1268218282 2797 dbSNP
rs1450009740 2800 dbSNP
rs1047989944 2803 dbSNP
rs772148828 2807 dbSNP
rs1383069738 2813 dbSNP
rs1200697541 2825 dbSNP
rs1241421220 2829 dbSNP
rs933541498 2831 dbSNP
rs1188210504 2837 dbSNP
rs1335746694 2862 dbSNP
rs901520992 2863 dbSNP
rs573831772 2871 dbSNP
rs555605549 2874 dbSNP
rs1401853494 2876 dbSNP
rs1423985623 2877 dbSNP
rs533856162 2879 dbSNP
rs536882501 2889 dbSNP
rs950300895 2897 dbSNP
rs917299037 2902 dbSNP
rs1335563984 2903 dbSNP
rs991576542 2906 dbSNP
rs937294647 2909 dbSNP
rs1038716086 2910 dbSNP
rs943030690 2915 dbSNP
rs914350939 2918 dbSNP
rs759812029 2929 dbSNP
rs772937049 2933 dbSNP
rs951316047 2934 dbSNP
rs1445688378 2935 dbSNP
rs566628703 2936 dbSNP
rs1384829886 2944 dbSNP
rs775794381 2962 dbSNP
rs551607507 2965 dbSNP
rs918532712 2980 dbSNP
rs1445213546 2984 dbSNP
rs147128607 2987 dbSNP
rs1263721820 3000 dbSNP
rs981382821 3003 dbSNP
rs965590878 3016 dbSNP
rs541779088 3018 dbSNP
rs1233551994 3019 dbSNP
rs184678152 3022 dbSNP
rs193066769 3023 dbSNP
rs748043994 3024 dbSNP
rs1229812423 3026 dbSNP
rs1382072925 3027 dbSNP
rs957679941 3031 dbSNP
rs561961358 3032 dbSNP
rs1359908743 3034 dbSNP
rs1313841041 3037 dbSNP
rs773144431 3060 dbSNP
rs1402208725 3062 dbSNP
rs959343693 3065 dbSNP
rs1234150309 3067 dbSNP
rs1031951625 3069 dbSNP
rs1348611060 3069 dbSNP
rs57027729 3073 dbSNP
rs999629873 3073 dbSNP
rs781153323 3075 dbSNP
rs1489203010 3080 dbSNP
rs1042361542 3081 dbSNP
rs1014388030 3082 dbSNP
rs1433428524 3090 dbSNP
rs1353264712 3091 dbSNP
rs143430408 3093 dbSNP
rs12118749 3094 dbSNP
rs1365344411 3097 dbSNP
rs1161857402 3112 dbSNP
rs1381495345 3113 dbSNP
rs188910451 3116 dbSNP
rs571566398 3119 dbSNP
rs902137949 3140 dbSNP
rs1048417675 3141 dbSNP
rs930007041 3149 dbSNP
rs1334108549 3150 dbSNP
rs577303611 3156 dbSNP
rs1355778892 3157 dbSNP
rs1039249251 3159 dbSNP
rs968699303 3159 dbSNP
rs376302658 3160 dbSNP
rs943056716 3166 dbSNP
rs1290789977 3167 dbSNP
rs562271449 3169 dbSNP
rs757928506 3179 dbSNP
rs543992930 3180 dbSNP
rs1307347254 3185 dbSNP
rs934365746 3186 dbSNP
rs957771845 3197 dbSNP
rs1032088188 3199 dbSNP
rs1165315891 3199 dbSNP
rs750146563 3200 dbSNP
rs573544593 3201 dbSNP
rs949849637 3202 dbSNP
rs1332147138 3220 dbSNP
rs1379195074 3222 dbSNP
rs1450449162 3230 dbSNP
rs1311884090 3231 dbSNP
rs1338348428 3231 dbSNP
rs35026214 3231 dbSNP
rs374556798 3231 dbSNP
rs555243887 3231 dbSNP
rs1198821088 3232 dbSNP
rs1277050078 3237 dbSNP
rs1406124902 3238 dbSNP
rs966784676 3243 dbSNP
rs1182344548 3245 dbSNP
rs372820373 3246 dbSNP
rs915851765 3247 dbSNP
rs147444087 3249 dbSNP
rs959417360 3257 dbSNP
rs1016646487 3258 dbSNP
rs984898192 3259 dbSNP
rs184768988 3260 dbSNP
rs1001736787 3261 dbSNP
rs1026392400 3270 dbSNP
rs1346003505 3271 dbSNP
rs997669490 3274 dbSNP
rs551401474 3280 dbSNP
rs1379841543 3288 dbSNP
rs1397637559 3291 dbSNP
rs573224216 3298 dbSNP
rs1293193180 3306 dbSNP
rs1339580852 3306 dbSNP
rs1048959989 3312 dbSNP
rs1398958339 3315 dbSNP
rs1427396126 3316 dbSNP
rs1427970310 3320 dbSNP
rs1201439682 3321 dbSNP
rs1480710933 3323 dbSNP
rs377181065 3327 dbSNP
rs557975834 3329 dbSNP
rs902002104 3334 dbSNP
rs1017825120 3335 dbSNP
rs1194719956 3346 dbSNP
rs539682673 3350 dbSNP
rs191879454 3351 dbSNP
rs1040945467 3352 dbSNP
rs187403136 3362 dbSNP
rs1287042392 3363 dbSNP
rs998523097 3367 dbSNP
rs1400409102 3384 dbSNP
rs902958227 3388 dbSNP
rs1045487530 3396 dbSNP
rs949884283 3400 dbSNP
rs915720662 3405 dbSNP
rs566192899 3413 dbSNP
rs1264479857 3417 dbSNP
rs1218218293 3431 dbSNP
rs1301433956 3434 dbSNP
rs535592384 3451 dbSNP
rs1367373007 3452 dbSNP
rs1212912580 3453 dbSNP
rs1345397099 3462 dbSNP
rs757738078 3463 dbSNP
rs372488147 3467 dbSNP
rs941238261 3471 dbSNP
rs1217845884 3476 dbSNP
rs909798227 3478 dbSNP
rs936550341 3483 dbSNP
rs1282002469 3486 dbSNP
rs568403920 3487 dbSNP
rs1363101544 3502 dbSNP
rs985230797 3503 dbSNP
rs966385845 3509 dbSNP
rs950734964 3510 dbSNP
rs1156895893 3522 dbSNP
rs919366736 3529 dbSNP
rs1299821559 3530 dbSNP
rs976109122 3531 dbSNP
rs960245732 3537 dbSNP
rs77163536 3539 dbSNP
rs1017687478 3540 dbSNP
rs1221601914 3543 dbSNP
rs1469416523 3544 dbSNP
rs1428503766 3546 dbSNP
rs1174198995 3548 dbSNP
rs1430010261 3550 dbSNP
rs1241430257 3566 dbSNP
rs1288669374 3570 dbSNP
rs754375463 3572 dbSNP
rs1320288537 3581 dbSNP
rs528750054 3582 dbSNP
rs1221161257 3585 dbSNP
rs114002181 3586 dbSNP
rs1033249489 3596 dbSNP
rs1237583782 3600 dbSNP
rs1484673934 3601 dbSNP
rs1160381676 3603 dbSNP
rs552331098 3614 dbSNP
rs1244634540 3625 dbSNP
rs888651444 3627 dbSNP
rs1404528888 3633 dbSNP
rs1165159959 3640 dbSNP
rs182494397 3644 dbSNP
rs761279627 3649 dbSNP
rs1330104125 3650 dbSNP
rs1376971347 3660 dbSNP
rs369319189 3662 dbSNP
rs1261747169 3663 dbSNP
rs116429315 3664 dbSNP
rs1228131006 3679 dbSNP
rs1290956389 3682 dbSNP
rs1323748249 3684 dbSNP
rs1196970323 3686 dbSNP
rs1257582144 3690 dbSNP
rs193004882 3696 dbSNP
rs1180489093 3699 dbSNP
rs897254997 3702 dbSNP
rs1213221101 3707 dbSNP
rs187527814 3710 dbSNP
rs375352659 3713 dbSNP
rs1415617773 3722 dbSNP
rs1407913157 3727 dbSNP
rs1451930580 3731 dbSNP
rs767652634 3739 dbSNP
rs1400441863 3742 dbSNP
rs1466712422 3743 dbSNP
rs182990825 3745 dbSNP
rs1339233274 3746 dbSNP
rs1447871431 3753 dbSNP
rs1055677363 3754 dbSNP
rs573161299 3759 dbSNP
rs1381792237 3760 dbSNP
rs889659161 3764 dbSNP
rs190842275 3766 dbSNP
rs1318815218 3767 dbSNP
rs936497950 3768 dbSNP
rs1276505774 3778 dbSNP
rs112547169 3780 dbSNP
rs546141432 3780 dbSNP
rs575476033 3784 dbSNP
rs556888268 3786 dbSNP
rs1046958514 3790 dbSNP
rs929317471 3793 dbSNP
rs1476699806 3794 dbSNP
rs774594098 3802 dbSNP
rs186350630 3810 dbSNP
rs976140346 3812 dbSNP
rs1170311993 3813 dbSNP
rs1400853900 3817 dbSNP
rs1414470061 3824 dbSNP
rs966138098 3827 dbSNP
rs141249302 3831 dbSNP
rs986730303 3832 dbSNP
rs41439344 3834 dbSNP
rs980378816 3840 dbSNP
rs1033697075 3842 dbSNP
rs999089470 3849 dbSNP
rs1344390593 3855 dbSNP
rs1219777506 3870 dbSNP
rs148237073 3875 dbSNP
rs967045665 3881 dbSNP
rs1027542888 3887 dbSNP
rs1023941157 3888 dbSNP
rs1481228513 3894 dbSNP
rs1489100754 3894 dbSNP
rs1251308633 3896 dbSNP
rs1202853143 3898 dbSNP
rs570533007 3901 dbSNP
rs1478058976 3913 dbSNP
rs183384739 3915 dbSNP
rs1034087843 3921 dbSNP
rs1019696684 3931 dbSNP
rs1297984439 3938 dbSNP
rs1005822774 3939 dbSNP
rs1321790480 3944 dbSNP
rs4304543 3947 dbSNP
rs1330647276 3962 dbSNP
rs1049616013 3963 dbSNP
rs1276649954 3970 dbSNP
rs1380611733 3972 dbSNP
rs1000715630 3973 dbSNP
rs1239322306 3977 dbSNP
rs752266226 3986 dbSNP
rs531116960 3996 dbSNP
rs1397114849 3997 dbSNP
rs1047429611 3998 dbSNP
rs1207751226 4000 dbSNP
rs929870104 4009 dbSNP
rs570183054 4015 dbSNP
rs548543767 4022 dbSNP
rs945232747 4034 dbSNP
rs373892103 4041 dbSNP
rs1040385796 4044 dbSNP
rs1367250894 4048 dbSNP
rs1438445644 4049 dbSNP
rs1017473039 4050 dbSNP
rs1381359997 4054 dbSNP
rs528975892 4058 dbSNP
rs1455648240 4061 dbSNP
rs1431867495 4066 dbSNP
rs1161773070 4067 dbSNP
rs944693678 4071 dbSNP
rs530837899 4075 dbSNP
rs764914440 4083 dbSNP
rs910657986 4090 dbSNP
rs1374756847 4093 dbSNP
rs1446004995 4095 dbSNP
rs561668152 4096 dbSNP
rs1443613278 4102 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084079. RNA binding protein: AGO2. Condition:CLIP_hippuristanol_rep2_AbnovaAb HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb HITS-CLIP data was present in GSM1084046. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep4 HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3 HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000373075.2 | 3UTR | AUAGUGCCACUGCACUCCAGCCUGGGCGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084045
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep3
Location of target site ENST00000373075.2 | 3UTR | AUAGUGCCACUGCACUCCAGCCUGGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084046
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep4
Location of target site ENST00000373075.2 | 3UTR | AUAGUGCCACUGCACUCCAGCCUGGGCGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000373075.2 | 3UTR | GAUAGUGCCACUGCACUCCAGCCUGGGCGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1084079
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_hippuristanol_rep2_AbnovaAb
Location of target site ENST00000373075.2 | 3UTR | AUAGUGCCACUGCACUCCAGCCUGGGCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla 0.862 7.6e-5 0.764 1.2e-3 13 Click to see details
GSE42095 Differentiated embryonic stem cells -0.438 1.8e-2 -0.039 4.3e-1 23 Click to see details
GSE19350 CNS germ cell tumors -0.551 3.2e-2 -0.465 6.4e-2 12 Click to see details
GSE38226 Liver fibrosis -0.365 5.2e-2 -0.238 1.5e-1 21 Click to see details
GSE28544 Breast cancer -0.312 6.9e-2 -0.261 1.1e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.278 1.2e-1 0.386 4.6e-2 20 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.209 1.6e-1 0.212 1.5e-1 25 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.489 1.6e-1 0.429 2.0e-1 6 Click to see details
GSE26953 Aortic valvular endothelial cells 0.188 1.9e-1 0.264 1.1e-1 24 Click to see details
GSE17306 Multiple myeloma 0.056 3.5e-1 0.029 4.2e-1 49 Click to see details
GSE17498 Multiple myeloma -0.061 3.5e-1 -0.065 3.5e-1 40 Click to see details
GSE14794 Lymphoblastoid cells 0.037 3.6e-1 -0.064 2.7e-1 90 Click to see details
GSE32688 Pancreatic cancer 0.058 3.8e-1 -0.110 2.7e-1 32 Click to see details
GSE27834 Pluripotent stem cells -0.085 3.8e-1 -0.106 3.5e-1 16 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.029 4.5e-1 0.010 4.8e-1 25 Click to see details
GSE21849 B cell lymphoma -0.019 4.6e-1 0.018 4.6e-1 29 Click to see details
GSE21687 Ependynoma primary tumors -0.009 4.7e-1 0.062 3.1e-1 64 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
CHOL -0.63 0.03 -0.767 0.01 9 Click to see details
LIHC 0.133 0.18 0.063 0.33 49 Click to see details
KIRP -0.344 0.18 -0.567 0.06 9 Click to see details
KICH 0.366 0.19 0.238 0.29 8 Click to see details
THCA -0.397 0.25 -0.500 0.2 5 Click to see details
STAD -0.208 0.31 0.119 0.39 8 Click to see details
KIRC 0.076 0.35 -0.070 0.36 29 Click to see details
HNSC -0.103 0.47 -0.500 0.33 3 Click to see details
ESCA -0.038 0.48 0.000 0.5 5 Click to see details
ESCA -0.038 0.48 0.000 0.5 5 Click to see details
ESCA -0.038 0.48 0.000 0.5 5 Click to see details
ESCA -0.038 0.48 0.000 0.5 5 Click to see details
ESCA -0.038 0.48 0.000 0.5 5 Click to see details
ESCA -0.038 0.48 0.000 0.5 5 Click to see details
MiRNA Regulatory Network:
Functional analysis:
Strong evidence (reporter assay, western blot, qRT-PCR or qPCR) Other evidence
Transcription factor regulation Circular RNA sponge
534 hsa-miR-122-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000012 CYP7A1 cytochrome P450 family 7 subfamily A member 1 3 1
MIRT006421 WNT1 Wnt family member 1 3 1
MIRT000364 IGF1R insulin like growth factor 1 receptor 4 3
MIRT000365 SRF serum response factor 4 1
MIRT000663 RAC1 Rac family small GTPase 1 5 2
MIRT000717 RHOA ras homolog family member A 2 2
MIRT006123 PRKRA protein activator of interferon induced protein kinase EIF2AK2 4 1
MIRT003006 CCNG1 cyclin G1 4 4
MIRT003081 ANK2 ankyrin 2 3 1
MIRT003082 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 3 1
MIRT003083 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 3 1
MIRT003084 ANXA11 annexin A11 4 2
MIRT003085 ALDOA aldolase, fructose-bisphosphate A 3 2
MIRT003086 RAB6B RAB6B, member RAS oncogene family 3 1
MIRT003087 RAB11FIP1 RAB11 family interacting protein 1 4 2
MIRT003088 FOXP1 forkhead box P1 3 1
MIRT003089 MECP2 methyl-CpG binding protein 2 3 2
MIRT003090 NCAM1 neural cell adhesion molecule 1 4 3
MIRT003091 UBAP2 ubiquitin associated protein 2 3 1
MIRT003092 TBX19 T-box 19 3 1
MIRT003093 AACS acetoacetyl-CoA synthetase 3 1
MIRT003094 DUSP2 dual specificity phosphatase 2 3 1
MIRT003095 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 3 1
MIRT003097 MAPK11 mitogen-activated protein kinase 11 3 1
MIRT003098 FUNDC2 FUN14 domain containing 2 3 1
MIRT003099 AKT3 AKT serine/threonine kinase 3 3 3
MIRT003100 TPD52L2 tumor protein D52 like 2 4 3
MIRT003102 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 4 2
MIRT003103 G6PC3 glucose-6-phosphatase catalytic subunit 3 4 2
MIRT003104 AP3M2 adaptor related protein complex 3 mu 2 subunit 3 1
MIRT003105 SLC7A1 solute carrier family 7 member 1 4 4
MIRT003106 XPO6 exportin 6 3 1
MIRT003107 FOXJ3 forkhead box J3 3 1
MIRT003108 SLC7A11 solute carrier family 7 member 11 3 1
MIRT003109 TRIB1 tribbles pseudokinase 1 3 1
MIRT003110 EGLN3 egl-9 family hypoxia inducible factor 3 3 1
MIRT003111 NUMBL NUMB like, endocytic adaptor protein 3 1
MIRT003112 ADAM17 ADAM metallopeptidase domain 17 3 5
MIRT003727 DSTYK dual serine/threonine and tyrosine protein kinase 3 2
MIRT003728 FAM117B family with sequence similarity 117 member B 3 1
MIRT004364 BCL2L2 BCL2 like 2 4 2
MIRT004527 PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 2 1
MIRT004879 ADAM10 ADAM metallopeptidase domain 10 4 1
MIRT005782 ACVR1C activin A receptor type 1C 1 1
MIRT007007 PTPN1 protein tyrosine phosphatase, non-receptor type 1 1 1
MIRT007081 NT5C3A 5'-nucleotidase, cytosolic IIIA 1 1
MIRT007082 P4HA1 prolyl 4-hydroxylase subunit alpha 1 1 1
MIRT007083 ZNF395 zinc finger protein 395 1 1
MIRT007084 SOCS1 suppressor of cytokine signaling 1 1 1
MIRT023396 PKM pyruvate kinase, muscle 5 3
MIRT023398 CLIC4 chloride intracellular channel 4 4 4
MIRT023403 CDK4 cyclin dependent kinase 4 2 2
MIRT438005 MEF2D myocyte enhancer factor 2D 1 2
MIRT438639 AXL AXL receptor tyrosine kinase 1 1
MIRT438655 NOD2 nucleotide binding oligomerization domain containing 2 3 1
MIRT438734 FUT8 fucosyltransferase 8 3 1
MIRT003079 GTF2B general transcription factor IIB 2 1
MIRT003080 GYS1 glycogen synthase 1 4 2
MIRT023217 SSR3 signal sequence receptor subunit 3 1 1
MIRT023218 PHOX2A paired like homeobox 2a 1 1
MIRT023219 DZIP1L DAZ interacting zinc finger protein 1 like 1 1
MIRT023220 GSTM2 glutathione S-transferase mu 2 1 1
MIRT023221 RAI14 retinoic acid induced 14 1 1
MIRT023222 STARD13 StAR related lipid transfer domain containing 13 1 1
MIRT023223 CNN3 calponin 3 1 1
MIRT023224 A2M alpha-2-macroglobulin 1 1
MIRT023225 EFCAB6 EF-hand calcium binding domain 6 1 1
MIRT023226 GLOD4 glyoxalase domain containing 4 1 1
MIRT023227 CALR calreticulin 1 1
MIRT023228 POFUT1 protein O-fucosyltransferase 1 1 1
MIRT023229 PYGO1 pygopus family PHD finger 1 1 1
MIRT023230 CDY2B chromodomain Y-linked 2B 1 1
MIRT023231 CDC42EP3 CDC42 effector protein 3 1 1
MIRT023232 CS citrate synthase 2 2
MIRT023233 RNF170 ring finger protein 170 2 2
MIRT023234 GTF3C6 general transcription factor IIIC subunit 6 1 1
MIRT023235 ZNF321P zinc finger protein 321, pseudogene 1 1
MIRT023236 LAMP1 lysosomal associated membrane protein 1 1 1
MIRT023237 SLC52A2 solute carrier family 52 member 2 1 1
MIRT023238 ZNF658 zinc finger protein 658 1 1
MIRT023239 ATP13A3 ATPase 13A3 1 1
MIRT023240 CPNE5 copine 5 1 1
MIRT023241 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT023242 TMEM136 transmembrane protein 136 1 1
MIRT023243 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT023244 TMEM74 transmembrane protein 74 1 1
MIRT023245 ANKRD10 ankyrin repeat domain 10 1 1
MIRT023246 TBL1XR1 transducin beta like 1 X-linked receptor 1 1 1
MIRT023247 USP10 ubiquitin specific peptidase 10 1 1
MIRT023248 AKAP11 A-kinase anchoring protein 11 1 1
MIRT023249 BACH2 BTB domain and CNC homolog 2 1 1
MIRT023250 HCCS holocytochrome c synthase 1 1
MIRT023251 Slc7a1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1 1
MIRT023252 GTDC2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1 1
MIRT023253 CTPS1 CTP synthase 1 1 1
MIRT023254 SLC44A1 solute carrier family 44 member 1 1 1
MIRT023255 CLSPN claspin 1 1
MIRT023256 RABGEF1 RAB guanine nucleotide exchange factor 1 1 1
MIRT023257 FBXO7 F-box protein 7 1 1
MIRT023258 NCDN neurochondrin 1 1
MIRT023259 SOX2 SRY-box 2 1 1
MIRT023260 ZNF618 zinc finger protein 618 1 1
MIRT023261 ABLIM1 actin binding LIM protein 1 1 1
MIRT023262 ZBTB4 zinc finger and BTB domain containing 4 1 1
MIRT023263 LUZP1 leucine zipper protein 1 1 1
MIRT023264 NLGN3 neuroligin 3 1 1
MIRT023265 PRR11 proline rich 11 1 1
MIRT023266 HHAT hedgehog acyltransferase 1 1
MIRT023267 UBE2L3 ubiquitin conjugating enzyme E2 L3 1 1
MIRT023268 DNAJC18 DnaJ heat shock protein family (Hsp40) member C18 1 1
MIRT023269 FAM102A family with sequence similarity 102 member A 1 1
MIRT023270 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT023271 DENND2C DENN domain containing 2C 1 1
MIRT023272 HMOX1 heme oxygenase 1 3 2
MIRT023273 USP28 ubiquitin specific peptidase 28 1 1
MIRT023274 KRT18 keratin 18 1 1
MIRT023275 BPGM bisphosphoglycerate mutase 1 1
MIRT023276 ZNF233 zinc finger protein 233 1 1
MIRT023277 SLC25A30 solute carrier family 25 member 30 1 1
MIRT023278 ANKRD9 ankyrin repeat domain 9 2 2
MIRT023279 RLN1 relaxin 1 1 1
MIRT023280 DDIT3 DNA damage inducible transcript 3 1 1
MIRT023281 TRIM65 tripartite motif containing 65 1 1
MIRT023282 B4GALT1 beta-1,4-galactosyltransferase 1 1 1
MIRT023283 ANXA7 annexin A7 1 1
MIRT023284 SLC19A2 solute carrier family 19 member 2 1 1
MIRT023285 MARCKS myristoylated alanine rich protein kinase C substrate 1 1
MIRT023286 CLEC11A C-type lectin domain containing 11A 1 1
MIRT023287 CENPF centromere protein F 1 1
MIRT023288 CLDN18 claudin 18 1 1
MIRT023289 PFDN1 prefoldin subunit 1 1 1
MIRT023290 SPAG9 sperm associated antigen 9 1 1
MIRT023291 CEACAM8 carcinoembryonic antigen related cell adhesion molecule 8 1 1
MIRT023292 KRT10 keratin 10 1 1
MIRT023293 SET SET nuclear proto-oncogene 1 1
MIRT023294 SLC11A2 solute carrier family 11 member 2 1 1
MIRT023295 MYCBP MYC binding protein 2 2
MIRT023296 GPHB5 glycoprotein hormone beta 5 1 1
MIRT023297 STAU2 staufen double-stranded RNA binding protein 2 1 1
MIRT023298 NFATC1 nuclear factor of activated T-cells 1 1 1
MIRT023299 ERP29 endoplasmic reticulum protein 29 1 1
MIRT023300 MEP1A meprin A subunit alpha 1 1
MIRT023301 SPTLC1 serine palmitoyltransferase long chain base subunit 1 1 1
MIRT023302 GTF2H2 general transcription factor IIH subunit 2 1 1
MIRT023303 C14orf39 chromosome 14 open reading frame 39 1 1
MIRT023304 UBE2K ubiquitin conjugating enzyme E2 K 1 1
MIRT023305 PPP1R9B protein phosphatase 1 regulatory subunit 9B 1 1
MIRT023306 PSMD10 proteasome 26S subunit, non-ATPase 10 1 1
MIRT023307 CALD1 caldesmon 1 1 1
MIRT023308 TTYH3 tweety family member 3 1 1
MIRT023309 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 1 1
MIRT023310 SCN4B sodium voltage-gated channel beta subunit 4 1 1
MIRT023311 C1orf122 chromosome 1 open reading frame 122 1 1
MIRT023312 PAK1 p21 (RAC1) activated kinase 1 1 1
MIRT023313 DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 1 1
MIRT023314 DMXL1 Dmx like 1 1 1
MIRT023315 ZNF160 zinc finger protein 160 1 1
MIRT023316 CSRP1 cysteine and glycine rich protein 1 1 1
MIRT023317 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT023318 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 1 1
MIRT023319 ANKRD13C ankyrin repeat domain 13C 1 1
MIRT023320 SUCLA2 succinate-CoA ligase ADP-forming beta subunit 1 1
MIRT023321 PEA15 phosphoprotein enriched in astrocytes 15 1 1
MIRT023322 MTPN myotrophin 1 1
MIRT023323 YKT6 YKT6 v-SNARE homolog 1 1
MIRT023324 MOB3B MOB kinase activator 3B 1 1
MIRT023325 FAM118A family with sequence similarity 118 member A 1 1
MIRT023326 ZNF264 zinc finger protein 264 1 1
MIRT023327 HECTD3 HECT domain E3 ubiquitin protein ligase 3 1 1
MIRT023328 BATF2 basic leucine zipper ATF-like transcription factor 2 1 1
MIRT023329 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 1 1
MIRT023330 MAPRE1 microtubule associated protein RP/EB family member 1 1 1
MIRT023331 TBC1D22B TBC1 domain family member 22B 1 1
MIRT023332 SLC9A1 solute carrier family 9 member A1 2 2
MIRT023333 NPEPPS aminopeptidase puromycin sensitive 1 1
MIRT023334 BCL2L1 BCL2 like 1 2 1
MIRT023335 OSMR oncostatin M receptor 1 1
MIRT023336 CALU calumenin 1 1
MIRT023337 BRI3BP BRI3 binding protein 1 1
MIRT023338 PSPH phosphoserine phosphatase 1 1
MIRT023339 APMAP adipocyte plasma membrane associated protein 1 1
MIRT023340 WASF1 WAS protein family member 1 1 1
MIRT023341 LCA5 LCA5, lebercilin 1 1
MIRT023342 NODAL nodal growth differentiation factor 1 1
MIRT023343 CASP7 caspase 7 1 1
MIRT023344 CPA3 carboxypeptidase A3 1 1
MIRT023345 PALM paralemmin 1 1
MIRT023346 TCP11 t-complex 11 1 1
MIRT023347 NALCN sodium leak channel, non-selective 1 1
MIRT023348 PLAGL2 PLAG1 like zinc finger 2 1 1
MIRT023349 IDS iduronate 2-sulfatase 2 2
MIRT023350 PARP11 poly(ADP-ribose) polymerase family member 11 1 1
MIRT023351 MAZ MYC associated zinc finger protein 1 1
MIRT023352 CPNE4 copine 4 1 1
MIRT023353 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 1 1
MIRT023354 KRT14 keratin 14 1 1
MIRT023355 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 1 1
MIRT023356 GNL3L G protein nucleolar 3 like 1 1
MIRT023357 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 1 1
MIRT023358 EYA4 EYA transcriptional coactivator and phosphatase 4 1 1
MIRT023359 GNPDA2 glucosamine-6-phosphate deaminase 2 1 1
MIRT023360 BRCA2 BRCA2, DNA repair associated 1 1
MIRT023361 ZSCAN4 zinc finger and SCAN domain containing 4 1 1
MIRT023362 HSPA5 heat shock protein family A (Hsp70) member 5 1 1
MIRT023363 SERAC1 serine active site containing 1 1 1
MIRT023364 SLC15A2 solute carrier family 15 member 2 1 1
MIRT023365 RABIF RAB interacting factor 1 1
MIRT023366 ART3 ADP-ribosyltransferase 3 1 1
MIRT023367 EP400 E1A binding protein p400 1 1
MIRT023368 MT4 metallothionein 4 1 1
MIRT023369 TRAM2 translocation associated membrane protein 2 1 1
MIRT023370 PHPT1 phosphohistidine phosphatase 1 1 1
MIRT023371 KIAA0101 PCNA clamp associated factor 1 1
MIRT023372 VHL von Hippel-Lindau tumor suppressor 1 1
MIRT023373 IFNA1 interferon alpha 1 1 1
MIRT023374 FSTL3 follistatin like 3 1 1
MIRT023375 PHF14 PHD finger protein 14 1 1
MIRT023376 ZCCHC2 zinc finger CCHC-type containing 2 1 1
MIRT023377 GSTM3 glutathione S-transferase mu 3 1 1
MIRT023378 DCTN5 dynactin subunit 5 1 1
MIRT023379 CHST3 carbohydrate sulfotransferase 3 1 1
MIRT023380 HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 1 1
MIRT023381 ADO 2-aminoethanethiol dioxygenase 1 1
MIRT023382 POMZP3 POM121 and ZP3 fusion 1 1
MIRT023383 CHST12 carbohydrate sulfotransferase 12 1 1
MIRT023384 ARSB arylsulfatase B 1 1
MIRT023385 ATP7A ATPase copper transporting alpha 1 1
MIRT023386 PMP22 peripheral myelin protein 22 1 1
MIRT023387 TGFBRAP1 transforming growth factor beta receptor associated protein 1 1 1
MIRT023388 ORC2 origin recognition complex subunit 2 1 1
MIRT023389 CREB1 cAMP responsive element binding protein 1 1 1
MIRT023390 CD83 CD83 molecule 1 1
MIRT023391 TOB2 transducer of ERBB2, 2 2 3
MIRT023392 LRP11 LDL receptor related protein 11 1 1
MIRT023393 MPV17 MPV17, mitochondrial inner membrane protein 1 1
MIRT023394 TRIM29 tripartite motif containing 29 1 1
MIRT023395 OSBP2 oxysterol binding protein 2 1 1
MIRT023397 FOXK2 forkhead box K2 2 2
MIRT023399 ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 1 1
MIRT023400 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 1 1
MIRT023401 LMNB2 lamin B2 2 3
MIRT023402 BAX BCL2 associated X, apoptosis regulator 2 2
MIRT054362 Cux1 cut-like homeobox 1 1 1
MIRT074336 TNRC6A trinucleotide repeat containing 6A 1 1
MIRT109185 VMA21 VMA21, vacuolar ATPase assembly factor 1 2
MIRT324745 ACER2 alkaline ceramidase 2 1 1
MIRT325564 HIATL1 major facilitator superfamily domain containing 14B 1 2
MIRT438206 TGFB1 transforming growth factor beta 1 1 1
MIRT449879 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 1
MIRT451716 OLR1 oxidized low density lipoprotein receptor 1 1 1
MIRT453274 EFTUD2 elongation factor Tu GTP binding domain containing 2 1 1
MIRT454113 MRPL52 mitochondrial ribosomal protein L52 1 1
MIRT454232 OSBPL10 oxysterol binding protein like 10 1 7
MIRT454344 CDKL1 cyclin dependent kinase like 1 1 1
MIRT455826 ZSWIM1 zinc finger SWIM-type containing 1 1 1
MIRT459903 PIGO phosphatidylinositol glycan anchor biosynthesis class O 1 6
MIRT461654 G6PC glucose-6-phosphatase catalytic subunit 1 1
MIRT461934 TNFSF14 TNF superfamily member 14 1 1
MIRT463834 WSB1 WD repeat and SOCS box containing 1 1 1
MIRT468615 SUMO1 small ubiquitin-like modifier 1 1 1
MIRT469456 REL REL proto-oncogene, NF-kB subunit 1 3
MIRT469637 RAD21 RAD21 cohesin complex component 1 3
MIRT473432 MDM4 MDM4, p53 regulator 1 1
MIRT473872 MAFK MAF bZIP transcription factor K 1 3
MIRT476861 FHL2 four and a half LIM domains 2 1 2
MIRT476893 FBXO21 F-box protein 21 1 1
MIRT479880 CCDC43 coiled-coil domain containing 43 1 1
MIRT488848 UBTF upstream binding transcription factor, RNA polymerase I 1 1
MIRT491164 LRP3 LDL receptor related protein 3 1 1
MIRT497662 PRMT3 protein arginine methyltransferase 3 1 1
MIRT499314 ZNF485 zinc finger protein 485 1 5
MIRT499759 CIRH1A UTP4, small subunit processome component 1 5
MIRT500014 ABCF2 ATP binding cassette subfamily F member 2 1 4
MIRT501090 SLC7A5 solute carrier family 7 member 5 1 2
MIRT509646 ZNF354B zinc finger protein 354B 1 5
MIRT509945 TOMM70A translocase of outer mitochondrial membrane 70 1 3
MIRT510320 SLC2A3 solute carrier family 2 member 3 1 2
MIRT515505 GTF2F1 general transcription factor IIF subunit 1 1 1
MIRT516410 COPA coatomer protein complex subunit alpha 1 1
MIRT517861 NCAPD2 non-SMC condensin I complex subunit D2 1 2
MIRT522558 MCAM melanoma cell adhesion molecule 1 2
MIRT523525 GLUL glutamate-ammonia ligase 1 1
MIRT523764 FBXO27 F-box protein 27 1 2
MIRT524517 CDK19 cyclin dependent kinase 19 1 1
MIRT524753 BIRC5 baculoviral IAP repeat containing 5 1 3
MIRT529366 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 1 2
MIRT531189 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 1 1
MIRT531639 C19orf52 translocase of inner mitochondrial membrane 29 1 2
MIRT531913 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 1 1
MIRT532678 PATZ1 POZ/BTB and AT hook containing zinc finger 1 1 1
MIRT533115 YIPF4 Yip1 domain family member 4 1 2
MIRT534740 RBM47 RNA binding motif protein 47 1 1
MIRT535471 PARVB parvin beta 1 2
MIRT536742 HSPA4L heat shock protein family A (Hsp70) member 4 like 1 1
MIRT537237 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 1 1
MIRT539523 ABCF1 ATP binding cassette subfamily F member 1 1 2
MIRT540438 RBM43 RNA binding motif protein 43 1 1
MIRT542982 ERC1 ELKS/RAB6-interacting/CAST family member 1 1 1
MIRT544674 AP1S1 adaptor related protein complex 1 sigma 1 subunit 1 1
MIRT549514 HDDC2 HD domain containing 2 1 1
MIRT549663 ORC6 origin recognition complex subunit 6 1 2
MIRT555420 PPIC peptidylprolyl isomerase C 1 1
MIRT564701 ZNF322P1 zinc finger protein 322 pseudogene 1 1 1
MIRT570046 PKNOX1 PBX/knotted 1 homeobox 1 1 1
MIRT570257 PRSS16 protease, serine 16 1 1
MIRT571143 HM13 histocompatibility minor 13 1 1
MIRT575202 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 1 1
MIRT575282 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 1 1
MIRT575302 Osbpl10 oxysterol binding protein-like 10 1 1
MIRT575323 Fbxo6 F-box protein 6 1 1
MIRT575377 Ang angiogenin, ribonuclease, RNase A family, 5 1 1
MIRT575614 Zswim1 zinc finger SWIM-type containing 1 1 1
MIRT575671 Map1b microtubule-associated protein 1B 1 1
MIRT607065 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 1 1
MIRT607490 HEBP2 heme binding protein 2 1 1
MIRT607522 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 1 1
MIRT607655 BTN3A2 butyrophilin subfamily 3 member A2 1 1
MIRT607795 RHBDL2 rhomboid like 2 1 1
MIRT607842 PHLDA3 pleckstrin homology like domain family A member 3 1 1
MIRT607927 ANG angiogenin 1 1
MIRT607966 SNX22 sorting nexin 22 1 1
MIRT608074 ZFP14 ZFP14 zinc finger protein 1 1
MIRT608141 SYAP1 synapse associated protein 1 1 1
MIRT612620 RABL3 RAB, member of RAS oncogene family like 3 1 1
MIRT617444 CCS copper chaperone for superoxide dismutase 1 1
MIRT617552 MTO1 mitochondrial tRNA translation optimization 1 1 1
MIRT618772 HLA-E major histocompatibility complex, class I, E 1 1
MIRT618926 MEAF6 MYST/Esa1 associated factor 6 1 1
MIRT619247 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 1 1
MIRT620091 YME1L1 YME1 like 1 ATPase 1 1
MIRT620483 XKR6 XK related 6 1 1
MIRT620570 WBSCR27 methyltransferase like 27 1 2
MIRT622977 ORAI2 ORAI calcium release-activated calcium modulator 2 1 1
MIRT623169 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 1 1
MIRT624165 DGKE diacylglycerol kinase epsilon 1 1
MIRT625268 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 1 1
MIRT625396 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 1 1
MIRT625694 OPTN optineurin 1 1
MIRT626093 MKLN1 muskelin 1 1 1
MIRT626431 CHDH choline dehydrogenase 1 1
MIRT627013 FIG4 FIG4 phosphoinositide 5-phosphatase 1 1
MIRT627077 SF3A1 splicing factor 3a subunit 1 1 1
MIRT627140 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 1 1
MIRT627347 TSHZ2 teashirt zinc finger homeobox 2 1 1
MIRT627420 THAP2 THAP domain containing 2 1 1
MIRT627441 TAS2R5 taste 2 receptor member 5 1 1
MIRT628078 KAT7 lysine acetyltransferase 7 1 2
MIRT628276 CYB5D1 cytochrome b5 domain containing 1 1 1
MIRT629094 F2RL1 F2R like trypsin receptor 1 1 1
MIRT629236 CINP cyclin dependent kinase 2 interacting protein 1 1
MIRT629286 UNC13A unc-13 homolog A 1 1
MIRT629407 ADM2 adrenomedullin 2 1 1
MIRT629584 RFC2 replication factor C subunit 2 1 1
MIRT629635 WDR31 WD repeat domain 31 1 1
MIRT629874 NOM1 nucleolar protein with MIF4G domain 1 1 1
MIRT629984 NARS asparaginyl-tRNA synthetase 1 1
MIRT630043 TERF2 telomeric repeat binding factor 2 1 1
MIRT630061 NIP7 NIP7, nucleolar pre-rRNA processing protein 1 1
MIRT630127 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 1
MIRT630155 ZBTB8A zinc finger and BTB domain containing 8A 1 1
MIRT630252 SMTNL2 smoothelin like 2 1 1
MIRT630278 PSMB5 proteasome subunit beta 5 1 1
MIRT630347 NKAP NFKB activating protein 1 1
MIRT630497 CYP20A1 cytochrome P450 family 20 subfamily A member 1 1 1
MIRT631264 CENPM centromere protein M 1 1
MIRT631403 IL2RA interleukin 2 receptor subunit alpha 1 1
MIRT632470 RPS15A ribosomal protein S15a 1 1
MIRT632596 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 1 1
MIRT632994 DUSP18 dual specificity phosphatase 18 1 1
MIRT633082 CXorf21 chromosome X open reading frame 21 1 1
MIRT633239 ZNF573 zinc finger protein 573 1 1
MIRT633286 SLC1A5 solute carrier family 1 member 5 1 1
MIRT633536 PGBD5 piggyBac transposable element derived 5 1 1
MIRT634338 SGOL1 shugoshin 1 1 1
MIRT634600 KIAA1919 major facilitator superfamily domain containing 4B 1 1
MIRT635050 MYH11 myosin heavy chain 11 1 1
MIRT635236 QPRT quinolinate phosphoribosyltransferase 1 1
MIRT635322 BMS1 BMS1, ribosome biogenesis factor 1 1
MIRT636268 RNF157 ring finger protein 157 1 1
MIRT636450 LRCH3 leucine rich repeats and calponin homology domain containing 3 1 1
MIRT636516 FMN1 formin 1 1 1
MIRT636755 SLC16A5 solute carrier family 16 member 5 1 1
MIRT637134 BAMBI BMP and activin membrane bound inhibitor 1 1
MIRT637188 ROMO1 reactive oxygen species modulator 1 1 1
MIRT637287 IBA57 IBA57 homolog, iron-sulfur cluster assembly 1 1
MIRT637532 RGS9BP regulator of G protein signaling 9 binding protein 1 1
MIRT637693 CEP89 centrosomal protein 89 1 1
MIRT637788 OLA1 Obg like ATPase 1 1 1
MIRT637925 LILRA2 leukocyte immunoglobulin like receptor A2 1 1
MIRT638449 PLXDC2 plexin domain containing 2 1 1
MIRT640871 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 1 1
MIRT642643 PTGR2 prostaglandin reductase 2 1 1
MIRT643082 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT643123 FAM71F2 family with sequence similarity 71 member F2 1 1
MIRT644236 SLC35E3 solute carrier family 35 member E3 1 1
MIRT644665 TMCO1 transmembrane and coiled-coil domains 1 1 1
MIRT645092 SLC35E2B solute carrier family 35 member E2B 1 1
MIRT645993 ACP6 acid phosphatase 6, lysophosphatidic 1 1
MIRT646508 FAM217B family with sequence similarity 217 member B 1 1
MIRT647013 ADCY2 adenylate cyclase 2 1 1
MIRT647095 SEC23B Sec23 homolog B, coat complex II component 1 1
MIRT647714 NFX1 nuclear transcription factor, X-box binding 1 1 2
MIRT648040 FADS6 fatty acid desaturase 6 1 1
MIRT648510 PIGG phosphatidylinositol glycan anchor biosynthesis class G 1 1
MIRT648865 ABCA6 ATP binding cassette subfamily A member 6 1 1
MIRT649182 DNPEP aspartyl aminopeptidase 1 1
MIRT649660 TEP1 telomerase associated protein 1 1 1
MIRT651465 XIAP X-linked inhibitor of apoptosis 1 1
MIRT652398 TMEM40 transmembrane protein 40 1 1
MIRT653691 SLC25A33 solute carrier family 25 member 33 1 1
MIRT654122 RPS6KA5 ribosomal protein S6 kinase A5 1 1
MIRT654577 PXMP4 peroxisomal membrane protein 4 1 1
MIRT656470 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 1 1
MIRT658905 DPY19L4 dpy-19 like 4 1 1
MIRT660878 ADRBK2 G protein-coupled receptor kinase 3 1 2
MIRT661101 SPIB Spi-B transcription factor 1 1
MIRT661238 ARL17B ADP ribosylation factor like GTPase 17B 1 1
MIRT661291 LIN52 lin-52 DREAM MuvB core complex component 1 1
MIRT662235 PGBD4 piggyBac transposable element derived 4 1 1
MIRT662544 MTAP methylthioadenosine phosphorylase 1 1
MIRT662736 LRRC3C leucine rich repeat containing 3C 1 1
MIRT662844 OMD osteomodulin 1 1
MIRT662907 MED18 mediator complex subunit 18 1 1
MIRT662956 JPH2 junctophilin 2 1 1
MIRT663340 ZNF74 zinc finger protein 74 1 1
MIRT663496 IYD iodotyrosine deiodinase 1 1
MIRT663523 MASTL microtubule associated serine/threonine kinase like 1 1
MIRT663542 CCR6 C-C motif chemokine receptor 6 1 1
MIRT663903 MRI1 methylthioribose-1-phosphate isomerase 1 1 1
MIRT663973 ZNF786 zinc finger protein 786 1 1
MIRT664350 C16orf45 chromosome 16 open reading frame 45 1 1
MIRT664417 TIGD6 tigger transposable element derived 6 1 1
MIRT664468 ZYG11B zyg-11 family member B, cell cycle regulator 1 1
MIRT664957 PTCD3 pentatricopeptide repeat domain 3 1 1
MIRT664970 TDRD1 tudor domain containing 1 1 1
MIRT665199 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 1 1
MIRT665359 XKR4 XK related 4 1 1
MIRT665454 WDR17 WD repeat domain 17 1 1
MIRT665486 VPS53 VPS53, GARP complex subunit 1 1
MIRT666078 SSTR2 somatostatin receptor 2 1 1
MIRT666258 SLC31A1 solute carrier family 31 member 1 1 1
MIRT666324 SLC16A10 solute carrier family 16 member 10 1 1
MIRT666486 SBNO1 strawberry notch homolog 1 1 1
MIRT666696 RBM23 RNA binding motif protein 23 1 1
MIRT666712 RBL1 RB transcriptional corepressor like 1 1 1
MIRT666762 RAB10 RAB10, member RAS oncogene family 1 1
MIRT666931 PNRC1 proline rich nuclear receptor coactivator 1 1 1
MIRT667226 NFE2L1 nuclear factor, erythroid 2 like 1 1 1
MIRT667359 MPLKIP M-phase specific PLK1 interacting protein 1 1
MIRT667474 MAPK1 mitogen-activated protein kinase 1 1 1
MIRT667558 LRAT lecithin retinol acyltransferase 1 1
MIRT667748 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 1 1
MIRT668088 GMEB1 glucocorticoid modulatory element binding protein 1 1 1
MIRT668119 GK5 glycerol kinase 5 (putative) 1 1
MIRT668166 GDE1 glycerophosphodiester phosphodiesterase 1 1 1
MIRT668346 STXBP2 syntaxin binding protein 2 1 1
MIRT668509 ESYT2 extended synaptotagmin 2 1 1
MIRT669291 C17orf85 nuclear cap binding subunit 3 1 1
MIRT669547 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT669778 CNDP1 carnosine dipeptidase 1 1 1
MIRT669858 BROX BRO1 domain and CAAX motif containing 1 2
MIRT670017 TECPR1 tectonin beta-propeller repeat containing 1 1 1
MIRT670177 CCDC142 coiled-coil domain containing 142 1 1
MIRT671107 ZNF841 zinc finger protein 841 1 1
MIRT671351 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 1 1
MIRT671476 FLYWCH2 FLYWCH family member 2 1 1
MIRT671492 SLC38A9 solute carrier family 38 member 9 1 1
MIRT671554 LIMS1 LIM zinc finger domain containing 1 1 1
MIRT671925 PLEKHS1 pleckstrin homology domain containing S1 1 2
MIRT672196 F2 coagulation factor II, thrombin 1 1
MIRT672217 DCAF7 DDB1 and CUL4 associated factor 7 1 1
MIRT672252 SIK2 salt inducible kinase 2 1 1
MIRT672290 GP2 glycoprotein 2 1 1
MIRT672430 POLR2D RNA polymerase II subunit D 1 1
MIRT672597 NKPD1 NTPase KAP family P-loop domain containing 1 1 1
MIRT672901 KRBA2 KRAB-A domain containing 2 1 1
MIRT672958 ZNF655 zinc finger protein 655 1 1
MIRT673096 SYNPO2L synaptopodin 2 like 1 1
MIRT673171 TMEM56 transmembrane protein 56 1 1
MIRT673251 INO80 INO80 complex subunit 1 1
MIRT673296 RNF19B ring finger protein 19B 1 1
MIRT673574 KDELC2 KDEL motif containing 2 1 1
MIRT673586 KIF1C kinesin family member 1C 1 1
MIRT673737 TCF23 transcription factor 23 1 1
MIRT673767 MRPL17 mitochondrial ribosomal protein L17 1 1
MIRT674215 FAM120AOS family with sequence similarity 120A opposite strand 1 1
MIRT674283 NAGK N-acetylglucosamine kinase 1 1
MIRT674338 KCMF1 potassium channel modulatory factor 1 1 1
MIRT674517 PRR23A proline rich 23A 1 1
MIRT675100 SNTB2 syntrophin beta 2 1 1
MIRT675144 MOGAT1 monoacylglycerol O-acyltransferase 1 1 2
MIRT675223 CLK4 CDC like kinase 4 1 1
MIRT675263 ZNF431 zinc finger protein 431 1 1
MIRT675577 WWC1 WW and C2 domain containing 1 1 1
MIRT676025 C9orf69 transmembrane protein 250 1 1
MIRT676430 PLEKHM3 pleckstrin homology domain containing M3 1 1
MIRT676560 VSIG1 V-set and immunoglobulin domain containing 1 1 1
MIRT676596 ARIH2OS ariadne RBR E3 ubiquitin protein ligase 2 opposite strand 1 1
MIRT678576 TMEM168 transmembrane protein 168 1 1
MIRT678756 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 1 1
MIRT680344 ZNF281 zinc finger protein 281 1 1
MIRT680467 C3 complement C3 1 1
MIRT682826 FLG2 filaggrin family member 2 1 1
MIRT682881 SAR1A secretion associated Ras related GTPase 1A 1 1
MIRT684404 TMEM180 major facilitator superfamily domain containing 13A 1 1
MIRT685275 KIAA1143 KIAA1143 1 1
MIRT686061 KCNA7 potassium voltage-gated channel subfamily A member 7 1 1
MIRT687526 NASP nuclear autoantigenic sperm protein 1 1
MIRT691760 BCL2L15 BCL2 like 15 1 1
MIRT693890 C3orf62 chromosome 3 open reading frame 62 1 1
MIRT699342 SLC35E1 solute carrier family 35 member E1 1 1
MIRT699909 RUNDC1 RUN domain containing 1 1 1
MIRT700536 PTPDC1 protein tyrosine phosphatase domain containing 1 1 1
MIRT701807 MRPS25 mitochondrial ribosomal protein S25 1 1
MIRT702174 LYRM4 LYR motif containing 4 1 1
MIRT706205 ACOT9 acyl-CoA thioesterase 9 1 1
MIRT706659 RNF216 ring finger protein 216 1 1
MIRT706682 COL13A1 collagen type XIII alpha 1 chain 1 1
MIRT706705 GPR155 G protein-coupled receptor 155 1 1
MIRT706777 ANKRD36 ankyrin repeat domain 36 1 1
MIRT706844 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 1 1
MIRT706863 MAFF MAF bZIP transcription factor F 1 1
MIRT706896 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 1 1
MIRT706916 THAP6 THAP domain containing 6 1 1
MIRT706962 FANCC Fanconi anemia complementation group C 1 1
MIRT706980 XPO5 exportin 5 1 1
MIRT707015 RRP36 ribosomal RNA processing 36 1 1
MIRT707032 ACTR5 ARP5 actin related protein 5 homolog 1 1
MIRT707072 MED29 mediator complex subunit 29 1 1
MIRT709368 SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 1 1
MIRT720092 SPTLC3 serine palmitoyltransferase long chain base subunit 3 1 1
MIRT721330 IFNAR2 interferon alpha and beta receptor subunit 2 1 1
MIRT724198 MED7 mediator complex subunit 7 1 1
MIRT725403 KIF6 kinesin family member 6 1 1
Error report submission
MIRT ID*
Your e-Mail*
Memo*