miRTarBase - #MIRT522558 -
pre-miRNA Information
pre-miRNA hsa-mir-122   
Genomic Coordinates chr18: 58451074 - 58451158
Synonyms MIR122A, MIRN122, MIRN122A, hsa-mir-122, miRNA122, miRNA122A, MIR122
Description Homo sapiens miR-122 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-122-5p
Sequence 15| UGGAGUGUGACAAUGGUGUUUG |36
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 18 + 58451091 29233923 link
C-to-U 11 18 + 58451098 28550310 link
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1258166649 1 dbSNP
rs1426570658 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles

Circulating MicroRNA Expression Profiling
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MCAM   
Synonyms CD146, MUC18
Description melanoma cell adhesion molecule
Transcript NM_006500   
Expression
Putative miRNA Targets on MCAM
3'UTR of MCAM
(miRNA target sites are highlighted)
>MCAM|NM_006500|3'UTR
   1 CCCCGAATCACTTCAGCTCCCTTCCCTGCCTGGACCATTCCCAGCTCCCTGCTCACTCTTCTCTCAGCCAAAGCCTCCAA
  81 AGGGACTAGAGAGAAGCCTCCTGCTCCCCTCGCCTGCACACCCCCTTTCAGAGGGCCACTGGGTTAGGACCTGAGGACCT
 161 CACTTGGCCCTGCAAGGCCCGCTTTTCAGGGACCAGTCCACCACCATCTCCTCCACGTTGAGTGAAGCTCATCCCAAGCA
 241 AGGAGCCCCAGTCTCCCGAGCGGGTAGGAGAGTTTCTTGCAGAACGTGTTTTTTCTTTACACACATTATGGCTGTAAATA
 321 CCTGGCTCCTGCCAGCAGCTGAGCTGGGTAGCCTCTCTGAGCTGGTTTCCTGCCCCAAAGGCTGGCTTCCACCATCCAGG
 401 TGCACCACTGAAGTGAGGACACACCGGAGCCAGGCGCCTGCTCATGTTGAAGTGCGCTGTTCACACCCGCTCCGGAGAGC
 481 ACCCCAGCAGCATCCAGAAGCAGCTGCAGTGTTGCTGCCACCACCCTCCTGTCTGCCTCTTCAAAGTCTCCTGTGACATT
 561 TTTTCTTTGGTCAGAAGCCAGGAACTGGTGTCATTCCTTAAAAGATACGTGCCGGGGCCAGGTGTGGTGGCTCACGCCTG
 641 TAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAAGTCAGGACGAGACCATCCTGGCTAACACGGTGAAACCC
 721 TGTCTCTACTAAAAATACAAAAAAAAATTAGCTAGGCGTAGTGGTTGGCACCTATAGTCCCAGCTACTCGGAAGGCTGAA
 801 GCAGGAGAATGGTATGAATCCAGGAGGTGGAGCTTGCAGTGAGCCGAGACCGTGCCACTGCACTCCAGCCTGGGCAACAC
 881 AGCGAGACTCCGTCTCGAGGAAAAAAAAAGAAAAGATACGTGCCTGCGGTGAGGAAGCTGGGCGCTGTTTTCGAGTTCAG
 961 GTGAATTAGCCTCAATCCCCCGTGTTCACTTGGCTCCCATAGCCCTCTTGATGGATCACGTAAAACTGAAAGGCAGCGGG
1041 GAGCAGACAAAGATGAGGTCTACACTGTCCTTCATGGGGATTAAAGCTATGGTTATATTAGCACCAAACTTCTACAAACC
1121 AAGCTCAGGGCCCCAACCCTAGAAGGGCCCAAATGAGAGAATGGTACTTAGGGATGGAAAACGGGCCTGGCTAGAGCTTC
1201 GGGTGTGTGTGTCTGTCTGTGTGTATGCATACATATGTGTGTATATATGGTTTTGTCAGGTGTGTAAATTTGCAAATTGT
1281 TTCCTTTATATATGTATGTATATATATATATGAAAATATATATATATATGAAAAATAAAGCTTAATTGTCCCAGAAATCA
1361 TA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
IDDuplex structurePositionScoreMFE
1
miRNA  3' guUUGUGGUAACAG---UGUGAGGu 5'
            :| |||: || |   :|||||| 
Target 5' ccGAGACCG-TGCCACTGCACTCCa 3'
844 - 867 135.00 -17.80
2
miRNA  3' guuuGUGGUAACAGUGUGAGGu 5'
              |:||  || ||||| || 
Target 5' ccctCGCC--TG-CACACCCCc 3'
107 - 125 121.00 -13.30
3
miRNA  3' guUUGUGGUAACAGUGUGAGGu 5'
            ::|| ||  |  | ||||| 
Target 5' tgGGCAACACAGCGAGACTCCg 3'
871 - 892 120.00 -12.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30142385 4 COSMIC
COSN31535012 5 COSMIC
COSN21341345 14 COSMIC
COSN30173594 35 COSMIC
COSN19690630 36 COSMIC
COSN5257290 37 COSMIC
COSN30109897 105 COSMIC
COSN1127543 137 COSMIC
COSN20108912 208 COSMIC
COSN1515952 377 COSMIC
COSN29660285 900 COSMIC
COSN6988358 1075 COSMIC
COSN27929339 1316 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs150929022 1 dbSNP
rs1297504846 2 dbSNP
rs201935046 3 dbSNP
rs199948359 4 dbSNP
rs769268470 5 dbSNP
rs531040877 7 dbSNP
rs779143822 8 dbSNP
rs748010430 11 dbSNP
rs1488315782 14 dbSNP
rs1261920684 15 dbSNP
rs780801087 16 dbSNP
rs754780609 17 dbSNP
rs561696388 19 dbSNP
rs779963441 21 dbSNP
rs1355845278 29 dbSNP
rs1032108138 30 dbSNP
rs1340028823 33 dbSNP
rs1282619929 36 dbSNP
rs371887504 40 dbSNP
rs753845862 41 dbSNP
rs1341199606 42 dbSNP
rs1405804266 45 dbSNP
rs764407986 47 dbSNP
rs1397998792 48 dbSNP
rs1344600823 52 dbSNP
rs1229489261 55 dbSNP
rs1279699115 55 dbSNP
rs879151591 56 dbSNP
rs1198642067 66 dbSNP
rs1487067137 68 dbSNP
rs1187708953 70 dbSNP
rs1050128617 75 dbSNP
rs1246022218 81 dbSNP
rs899501937 85 dbSNP
rs1168875733 88 dbSNP
rs1376552586 96 dbSNP
rs1464123500 108 dbSNP
rs543705666 111 dbSNP
rs183485459 112 dbSNP
rs1349296991 119 dbSNP
rs557747994 121 dbSNP
rs1367879374 122 dbSNP
rs1436054449 125 dbSNP
rs1303017146 133 dbSNP
rs1329370473 134 dbSNP
rs901799836 136 dbSNP
rs1040319894 140 dbSNP
rs545451605 147 dbSNP
rs1304090208 153 dbSNP
rs887053020 155 dbSNP
rs1257628656 159 dbSNP
rs1345608738 163 dbSNP
rs2509405 166 dbSNP
rs1265971274 167 dbSNP
rs2511838 168 dbSNP
rs376655772 180 dbSNP
rs191302594 181 dbSNP
rs898554846 187 dbSNP
rs1402151325 190 dbSNP
rs1200393448 197 dbSNP
rs553884990 204 dbSNP
rs113115961 207 dbSNP
rs201114581 210 dbSNP
rs199999338 212 dbSNP
rs148726764 215 dbSNP
rs375629408 215 dbSNP
rs759708602 215 dbSNP
rs535274031 216 dbSNP
rs1297402874 217 dbSNP
rs867834446 218 dbSNP
rs937467768 223 dbSNP
rs1458119127 226 dbSNP
rs1293121826 228 dbSNP
rs1388800852 230 dbSNP
rs1302061102 233 dbSNP
rs927276960 234 dbSNP
rs1379116064 242 dbSNP
rs1286404238 244 dbSNP
rs980164376 246 dbSNP
rs1209126444 247 dbSNP
rs1264435745 250 dbSNP
rs1487294910 251 dbSNP
rs971370705 255 dbSNP
rs928633844 256 dbSNP
rs1046177632 257 dbSNP
rs1180593919 258 dbSNP
rs188082113 259 dbSNP
rs555631942 260 dbSNP
rs989035906 261 dbSNP
rs956184195 262 dbSNP
rs1294387027 265 dbSNP
rs1369972454 267 dbSNP
rs1408112052 268 dbSNP
rs1195209769 270 dbSNP
rs1033203711 271 dbSNP
rs7914 280 dbSNP
rs1211106723 284 dbSNP
rs570226404 285 dbSNP
rs1265691281 286 dbSNP
rs551780965 290 dbSNP
rs1202417502 298 dbSNP
rs1254524105 303 dbSNP
rs117103201 308 dbSNP
rs957533794 310 dbSNP
rs1258074465 321 dbSNP
rs1254477913 344 dbSNP
rs1307023529 348 dbSNP
rs1029073662 350 dbSNP
rs1165702108 351 dbSNP
rs995803724 353 dbSNP
rs1427834612 355 dbSNP
rs1296454646 357 dbSNP
rs769494773 359 dbSNP
rs963822340 364 dbSNP
rs1442798743 366 dbSNP
rs1019262809 369 dbSNP
rs1376636665 371 dbSNP
rs767125295 376 dbSNP
rs1277843316 377 dbSNP
rs1397599766 381 dbSNP
rs1415577736 384 dbSNP
rs1341042394 385 dbSNP
rs1404106709 387 dbSNP
rs1300798477 388 dbSNP
rs1225804566 394 dbSNP
rs1276114200 397 dbSNP
rs1008332095 402 dbSNP
rs1209965558 406 dbSNP
rs565878892 408 dbSNP
rs951304608 411 dbSNP
rs1025994196 412 dbSNP
rs995263712 413 dbSNP
rs773196945 416 dbSNP
rs1190796568 423 dbSNP
rs1390841708 424 dbSNP
rs547484974 425 dbSNP
rs1055590054 426 dbSNP
rs1200527352 431 dbSNP
rs529303451 435 dbSNP
rs766046365 436 dbSNP
rs1432413136 444 dbSNP
rs1045710621 445 dbSNP
rs1048919778 454 dbSNP
rs369815222 455 dbSNP
rs543216815 456 dbSNP
rs1425115306 458 dbSNP
rs1211520752 462 dbSNP
rs769442361 465 dbSNP
rs1180463575 466 dbSNP
rs117152376 468 dbSNP
rs1259228646 469 dbSNP
rs564199901 473 dbSNP
rs1316171768 474 dbSNP
rs963770278 477 dbSNP
rs912317152 497 dbSNP
rs1257443843 501 dbSNP
rs533285529 502 dbSNP
rs951124998 503 dbSNP
rs1025519164 506 dbSNP
rs995377904 507 dbSNP
rs777021149 508 dbSNP
rs1322059286 509 dbSNP
rs989003420 514 dbSNP
rs962632244 519 dbSNP
rs1272567984 524 dbSNP
rs748020679 525 dbSNP
rs1224641602 527 dbSNP
rs1288296992 531 dbSNP
rs1001343806 536 dbSNP
rs907256301 543 dbSNP
rs747611800 544 dbSNP
rs1219731363 550 dbSNP
rs1248503400 555 dbSNP
rs1463945780 563 dbSNP
rs1200005794 565 dbSNP
rs1411148554 565 dbSNP
rs1024818324 569 dbSNP
rs1010199497 571 dbSNP
rs1408524931 573 dbSNP
rs775863205 576 dbSNP
rs1398924762 579 dbSNP
rs1404360052 580 dbSNP
rs772571675 581 dbSNP
rs1405063611 583 dbSNP
rs781066989 604 dbSNP
rs978993428 604 dbSNP
rs144003042 608 dbSNP
rs1028710017 609 dbSNP
rs1423624057 611 dbSNP
rs572061318 613 dbSNP
rs536264277 614 dbSNP
rs754945840 617 dbSNP
rs1456777317 618 dbSNP
rs1204540215 620 dbSNP
rs1018647668 621 dbSNP
rs1482029064 623 dbSNP
rs182206617 625 dbSNP
rs1358802516 626 dbSNP
rs929779578 629 dbSNP
rs574542511 630 dbSNP
rs1424683020 632 dbSNP
rs139062635 633 dbSNP
rs780654651 635 dbSNP
rs1354164637 636 dbSNP
rs962581510 637 dbSNP
rs994644597 638 dbSNP
rs1340203212 642 dbSNP
rs537227497 646 dbSNP
rs1311095558 654 dbSNP
rs1286112727 660 dbSNP
rs146398025 663 dbSNP
rs1376041608 664 dbSNP
rs1044435175 665 dbSNP
rs950159512 668 dbSNP
rs1387972572 669 dbSNP
rs550742167 672 dbSNP
rs558158972 673 dbSNP
rs934906870 675 dbSNP
rs1444863852 676 dbSNP
rs1453948812 683 dbSNP
rs1381327607 684 dbSNP
rs1431132280 686 dbSNP
rs1160822384 689 dbSNP
rs971641380 690 dbSNP
rs532236104 691 dbSNP
rs868526367 693 dbSNP
rs1199723988 694 dbSNP
rs1453433585 695 dbSNP
rs979431999 701 dbSNP
rs1367393959 702 dbSNP
rs1228254242 703 dbSNP
rs190015082 705 dbSNP
rs1198730071 706 dbSNP
rs1488736659 706 dbSNP
rs547348495 707 dbSNP
rs749495120 710 dbSNP
rs186437269 711 dbSNP
rs374945930 712 dbSNP
rs1193255463 719 dbSNP
rs1018618083 721 dbSNP
rs900725047 723 dbSNP
rs1407236744 728 dbSNP
rs1318709966 730 dbSNP
rs569140690 732 dbSNP
rs1383048130 735 dbSNP
rs1235255171 738 dbSNP
rs983098487 739 dbSNP
rs1322972461 743 dbSNP
rs1039309427 747 dbSNP
rs1230953486 748 dbSNP
rs1285144568 748 dbSNP
rs1323906318 748 dbSNP
rs768457005 749 dbSNP
rs571063260 753 dbSNP
rs1027541114 754 dbSNP
rs1266073012 755 dbSNP
rs995180474 757 dbSNP
rs142204710 758 dbSNP
rs1400305571 760 dbSNP
rs755854063 765 dbSNP
rs1430615360 769 dbSNP
rs1014284060 774 dbSNP
rs372108513 789 dbSNP
rs1380033272 790 dbSNP
rs1454476195 792 dbSNP
rs1173697646 801 dbSNP
rs918356768 804 dbSNP
rs1388613037 805 dbSNP
rs1053135575 807 dbSNP
rs1346051753 808 dbSNP
rs941039834 808 dbSNP
rs564442567 810 dbSNP
rs148351688 811 dbSNP
rs934645157 820 dbSNP
rs904535879 822 dbSNP
rs1043292494 828 dbSNP
rs932922315 830 dbSNP
rs1487849857 831 dbSNP
rs921420746 838 dbSNP
rs527535606 842 dbSNP
rs1278995040 844 dbSNP
rs560197740 845 dbSNP
rs144362249 846 dbSNP
rs754899285 851 dbSNP
rs1218688708 852 dbSNP
rs1342035591 853 dbSNP
rs1275946951 854 dbSNP
rs1366947207 855 dbSNP
rs1398954065 857 dbSNP
rs1344976539 860 dbSNP
rs1426853110 861 dbSNP
rs983617857 862 dbSNP
rs1370071734 869 dbSNP
rs1033108133 870 dbSNP
rs1296405424 874 dbSNP
rs1335269259 876 dbSNP
rs574613864 879 dbSNP
rs562428521 883 dbSNP
rs527860401 884 dbSNP
rs1175843690 890 dbSNP
rs751105511 891 dbSNP
rs560639444 892 dbSNP
rs1481129285 895 dbSNP
rs1009554258 896 dbSNP
rs149612367 897 dbSNP
rs1237912494 898 dbSNP
rs138237786 900 dbSNP
rs993696892 901 dbSNP
rs959873905 902 dbSNP
rs181781552 904 dbSNP
rs750063885 905 dbSNP
rs1321893583 910 dbSNP
rs760984626 910 dbSNP
rs1403689573 911 dbSNP
rs1454228242 911 dbSNP
rs941154041 912 dbSNP
rs1212303217 913 dbSNP
rs1297167874 913 dbSNP
rs1319415269 913 dbSNP
rs1255538465 915 dbSNP
rs11033 917 dbSNP
rs926955092 917 dbSNP
rs1131467 918 dbSNP
rs1204503952 919 dbSNP
rs1491551179 919 dbSNP
rs553769684 919 dbSNP
rs71462030 919 dbSNP
rs879507527 919 dbSNP
rs1491377329 920 dbSNP
rs989022017 921 dbSNP
rs535433389 922 dbSNP
rs568572315 923 dbSNP
rs978836823 927 dbSNP
rs13612 928 dbSNP
rs538091403 930 dbSNP
rs944156294 934 dbSNP
rs772486979 935 dbSNP
rs1387432524 936 dbSNP
rs1428290585 941 dbSNP
rs1047454141 942 dbSNP
rs576905013 943 dbSNP
rs13699 944 dbSNP
rs1409671474 947 dbSNP
rs552360134 951 dbSNP
rs1893267 952 dbSNP
rs560460523 953 dbSNP
rs1224522895 955 dbSNP
rs1471707215 961 dbSNP
rs548243579 962 dbSNP
rs1179195114 963 dbSNP
rs1218262662 967 dbSNP
rs1459030297 969 dbSNP
rs1235889459 977 dbSNP
rs1037869694 978 dbSNP
rs1893268 979 dbSNP
rs562651149 981 dbSNP
rs1176873041 982 dbSNP
rs58939366 982 dbSNP
rs1160866371 983 dbSNP
rs1345223132 984 dbSNP
rs917119514 985 dbSNP
rs1226208768 986 dbSNP
rs778147489 989 dbSNP
rs1406166697 999 dbSNP
rs1314716331 1000 dbSNP
rs1349047517 1002 dbSNP
rs1225636699 1004 dbSNP
rs1285261440 1014 dbSNP
rs1448258243 1017 dbSNP
rs1031947668 1019 dbSNP
rs576834295 1020 dbSNP
rs1271218750 1021 dbSNP
rs1490810189 1027 dbSNP
rs969243444 1031 dbSNP
rs1329451689 1032 dbSNP
rs747921137 1037 dbSNP
rs567264013 1038 dbSNP
rs899843911 1039 dbSNP
rs1178506648 1040 dbSNP
rs1041292758 1041 dbSNP
rs13700 1046 dbSNP
rs1404458092 1047 dbSNP
rs1161128788 1048 dbSNP
rs369158155 1050 dbSNP
rs372721306 1050 dbSNP
rs954738841 1052 dbSNP
rs1307987938 1053 dbSNP
rs367736991 1054 dbSNP
rs1026772968 1055 dbSNP
rs972281696 1059 dbSNP
rs1384385844 1071 dbSNP
rs548968168 1074 dbSNP
rs1441521767 1076 dbSNP
rs1378368768 1079 dbSNP
rs554026646 1080 dbSNP
rs1244104974 1081 dbSNP
rs1016367794 1086 dbSNP
rs1360282245 1092 dbSNP
rs1223079653 1094 dbSNP
rs1272206724 1102 dbSNP
rs887259473 1104 dbSNP
rs1435805406 1108 dbSNP
rs751477561 1112 dbSNP
rs905590423 1114 dbSNP
rs535494278 1115 dbSNP
rs1014296009 1116 dbSNP
rs12787894 1121 dbSNP
rs1386510032 1127 dbSNP
rs895477107 1128 dbSNP
rs1247884581 1129 dbSNP
rs898871356 1131 dbSNP
rs192004725 1132 dbSNP
rs948361541 1134 dbSNP
rs915596808 1137 dbSNP
rs186838157 1143 dbSNP
rs537962781 1157 dbSNP
rs1358994805 1158 dbSNP
rs1241301090 1163 dbSNP
rs904460879 1165 dbSNP
rs938632158 1167 dbSNP
rs1227777924 1170 dbSNP
rs924462958 1172 dbSNP
rs977699741 1173 dbSNP
rs968586992 1175 dbSNP
rs1273420147 1180 dbSNP
rs570889053 1182 dbSNP
rs3794070 1183 dbSNP
rs933436055 1183 dbSNP
rs12786193 1185 dbSNP
rs919252773 1186 dbSNP
rs763057644 1190 dbSNP
rs1191813191 1199 dbSNP
rs964019282 1200 dbSNP
rs1368416833 1201 dbSNP
rs1169016225 1204 dbSNP
rs773106917 1205 dbSNP
rs1019654688 1206 dbSNP
rs1276624572 1209 dbSNP
rs552430405 1210 dbSNP
rs1407085949 1211 dbSNP
rs1434655371 1212 dbSNP
rs779598912 1213 dbSNP
rs972064080 1213 dbSNP
rs533962084 1216 dbSNP
rs779065461 1221 dbSNP
rs1421320092 1227 dbSNP
rs1322512489 1230 dbSNP
rs757901028 1232 dbSNP
rs566813823 1233 dbSNP
rs1433632299 1236 dbSNP
rs1323759586 1237 dbSNP
rs1204245794 1239 dbSNP
rs1025897194 1241 dbSNP
rs996046566 1244 dbSNP
rs1426736717 1247 dbSNP
rs1188940588 1248 dbSNP
rs1448231647 1253 dbSNP
rs1194471110 1262 dbSNP
rs1479935934 1262 dbSNP
rs1263423201 1264 dbSNP
rs1178994426 1266 dbSNP
rs1218294027 1269 dbSNP
rs1489488657 1272 dbSNP
rs1453305470 1278 dbSNP
rs12786135 1279 dbSNP
rs12785779 1285 dbSNP
rs1387142978 1293 dbSNP
rs898678429 1294 dbSNP
rs1318832039 1297 dbSNP
rs980871221 1300 dbSNP
rs1403067335 1302 dbSNP
rs1284949545 1303 dbSNP
rs1324021960 1304 dbSNP
rs765169353 1308 dbSNP
rs969585817 1309 dbSNP
rs12785766 1311 dbSNP
rs1013994901 1312 dbSNP
rs1025601307 1312 dbSNP
rs12785948 1312 dbSNP
rs895582012 1312 dbSNP
rs1490001770 1315 dbSNP
rs181810030 1317 dbSNP
rs764818809 1321 dbSNP
rs1303560513 1324 dbSNP
rs1217514885 1326 dbSNP
rs776433810 1326 dbSNP
rs894133857 1328 dbSNP
rs1454544703 1330 dbSNP
rs757522107 1330 dbSNP
rs770061554 1330 dbSNP
rs1344919932 1335 dbSNP
rs1363857844 1335 dbSNP
rs1279102408 1336 dbSNP
rs1056759917 1339 dbSNP
rs1422610516 1345 dbSNP
rs904408952 1351 dbSNP
rs529956779 1354 dbSNP
rs938600957 1356 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine, RNase T1 ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1
miRNA  3' guuugugguaacaGUGUGAGGu 5'
                       ::|||||| 
Target 5' ----------cacUGCACUCCa 3'
1 - 12
2
miRNA  3' guUUGUGGUAACAGUGUGAGGu 5'
            ::|| ||  |  | ||||| 
Target 5' ugGGCAACACAGCGAGACUCCg 3'
16 - 37
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine, ML_MM_6 ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000392814.1 | 3UTR | CACUGCACUCCAGCCUGGGCAACACAGCGAGACUCCGUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000392814.1 | 3UTR | CACUCCAGCCUGGGCAACACAGCGAGACUCCGUCUCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
MiRNA-Target Expression Profile (TCGA)
MiRNA Regulatory Network:
Functional analysis:
Strong evidence (reporter assay, western blot, qRT-PCR or qPCR) Other evidence
Transcription factor regulation Circular RNA sponge
534 hsa-miR-122-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000012 CYP7A1 cytochrome P450 family 7 subfamily A member 1 3 1
MIRT000364 IGF1R insulin like growth factor 1 receptor 4 3
MIRT000365 SRF serum response factor 4 1
MIRT000663 RAC1 Rac family small GTPase 1 5 2
MIRT000717 RHOA ras homolog family member A 2 2
MIRT003006 CCNG1 cyclin G1 4 4
MIRT003079 GTF2B general transcription factor IIB 2 1
MIRT003080 GYS1 glycogen synthase 1 4 2
MIRT003081 ANK2 ankyrin 2 3 1
MIRT003082 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 3 1
MIRT003083 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 3 1
MIRT003084 ANXA11 annexin A11 4 2
MIRT003085 ALDOA aldolase, fructose-bisphosphate A 3 2
MIRT003086 RAB6B RAB6B, member RAS oncogene family 3 1
MIRT003087 RAB11FIP1 RAB11 family interacting protein 1 4 2
MIRT003088 FOXP1 forkhead box P1 3 1
MIRT003089 MECP2 methyl-CpG binding protein 2 3 2
MIRT003090 NCAM1 neural cell adhesion molecule 1 4 3
MIRT003091 UBAP2 ubiquitin associated protein 2 3 1
MIRT003092 TBX19 T-box 19 3 1
MIRT003093 AACS acetoacetyl-CoA synthetase 3 1
MIRT003094 DUSP2 dual specificity phosphatase 2 3 1
MIRT003095 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 3 1
MIRT003097 MAPK11 mitogen-activated protein kinase 11 3 1
MIRT003098 FUNDC2 FUN14 domain containing 2 3 1
MIRT003099 AKT3 AKT serine/threonine kinase 3 3 3
MIRT003100 TPD52L2 tumor protein D52 like 2 4 3
MIRT003102 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 4 2
MIRT003103 G6PC3 glucose-6-phosphatase catalytic subunit 3 4 2
MIRT003104 AP3M2 adaptor related protein complex 3 mu 2 subunit 3 1
MIRT003105 SLC7A1 solute carrier family 7 member 1 4 4
MIRT003106 XPO6 exportin 6 3 1
MIRT003107 FOXJ3 forkhead box J3 3 1
MIRT003108 SLC7A11 solute carrier family 7 member 11 3 1
MIRT003109 TRIB1 tribbles pseudokinase 1 3 1
MIRT003110 EGLN3 egl-9 family hypoxia inducible factor 3 3 1
MIRT003111 NUMBL NUMB like, endocytic adaptor protein 3 1
MIRT003112 ADAM17 ADAM metallopeptidase domain 17 3 5
MIRT003727 DSTYK dual serine/threonine and tyrosine protein kinase 3 2
MIRT003728 FAM117B family with sequence similarity 117 member B 3 1
MIRT004364 BCL2L2 BCL2 like 2 4 2
MIRT004527 PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 2 1
MIRT004879 ADAM10 ADAM metallopeptidase domain 10 4 1
MIRT005782 ACVR1C activin A receptor type 1C 1 1
MIRT006123 PRKRA protein activator of interferon induced protein kinase EIF2AK2 4 1
MIRT006421 WNT1 Wnt family member 1 3 1
MIRT007007 PTPN1 protein tyrosine phosphatase, non-receptor type 1 1 1
MIRT007081 NT5C3A 5'-nucleotidase, cytosolic IIIA 1 1
MIRT007082 P4HA1 prolyl 4-hydroxylase subunit alpha 1 1 1
MIRT007083 ZNF395 zinc finger protein 395 1 1
MIRT007084 SOCS1 suppressor of cytokine signaling 1 1 1
MIRT023217 SSR3 signal sequence receptor subunit 3 1 1
MIRT023218 PHOX2A paired like homeobox 2a 1 1
MIRT023219 DZIP1L DAZ interacting zinc finger protein 1 like 1 1
MIRT023220 GSTM2 glutathione S-transferase mu 2 1 1
MIRT023221 RAI14 retinoic acid induced 14 1 1
MIRT023222 STARD13 StAR related lipid transfer domain containing 13 1 1
MIRT023223 CNN3 calponin 3 1 1
MIRT023224 A2M alpha-2-macroglobulin 1 1
MIRT023225 EFCAB6 EF-hand calcium binding domain 6 1 1
MIRT023226 GLOD4 glyoxalase domain containing 4 1 1
MIRT023227 CALR calreticulin 1 1
MIRT023228 POFUT1 protein O-fucosyltransferase 1 1 1
MIRT023229 PYGO1 pygopus family PHD finger 1 1 1
MIRT023230 CDY2B chromodomain Y-linked 2B 1 1
MIRT023231 CDC42EP3 CDC42 effector protein 3 1 1
MIRT023232 CS citrate synthase 2 2
MIRT023233 RNF170 ring finger protein 170 2 2
MIRT023234 GTF3C6 general transcription factor IIIC subunit 6 1 1
MIRT023235 ZNF321P zinc finger protein 321, pseudogene 1 1
MIRT023236 LAMP1 lysosomal associated membrane protein 1 1 1
MIRT023237 SLC52A2 solute carrier family 52 member 2 1 1
MIRT023238 ZNF658 zinc finger protein 658 1 1
MIRT023239 ATP13A3 ATPase 13A3 1 1
MIRT023240 CPNE5 copine 5 1 1
MIRT023241 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT023242 TMEM136 transmembrane protein 136 1 1
MIRT023243 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT023244 TMEM74 transmembrane protein 74 1 1
MIRT023245 ANKRD10 ankyrin repeat domain 10 1 1
MIRT023246 TBL1XR1 transducin beta like 1 X-linked receptor 1 1 1
MIRT023247 USP10 ubiquitin specific peptidase 10 1 1
MIRT023248 AKAP11 A-kinase anchoring protein 11 1 1
MIRT023249 BACH2 BTB domain and CNC homolog 2 1 1
MIRT023250 HCCS holocytochrome c synthase 1 1
MIRT023251 Slc7a1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1 1
MIRT023252 GTDC2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1 1
MIRT023253 CTPS1 CTP synthase 1 1 1
MIRT023254 SLC44A1 solute carrier family 44 member 1 1 1
MIRT023255 CLSPN claspin 1 1
MIRT023256 RABGEF1 RAB guanine nucleotide exchange factor 1 1 1
MIRT023257 FBXO7 F-box protein 7 1 1
MIRT023258 NCDN neurochondrin 1 1
MIRT023259 SOX2 SRY-box 2 1 1
MIRT023260 ZNF618 zinc finger protein 618 1 1
MIRT023261 ABLIM1 actin binding LIM protein 1 1 1
MIRT023262 ZBTB4 zinc finger and BTB domain containing 4 1 1
MIRT023263 LUZP1 leucine zipper protein 1 1 1
MIRT023264 NLGN3 neuroligin 3 1 1
MIRT023265 PRR11 proline rich 11 1 1
MIRT023266 HHAT hedgehog acyltransferase 1 1
MIRT023267 UBE2L3 ubiquitin conjugating enzyme E2 L3 1 1
MIRT023268 DNAJC18 DnaJ heat shock protein family (Hsp40) member C18 1 1
MIRT023269 FAM102A family with sequence similarity 102 member A 1 1
MIRT023270 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT023271 DENND2C DENN domain containing 2C 1 1
MIRT023272 HMOX1 heme oxygenase 1 3 2
MIRT023273 USP28 ubiquitin specific peptidase 28 1 1
MIRT023274 KRT18 keratin 18 1 1
MIRT023275 BPGM bisphosphoglycerate mutase 1 1
MIRT023276 ZNF233 zinc finger protein 233 1 1
MIRT023277 SLC25A30 solute carrier family 25 member 30 1 1
MIRT023278 ANKRD9 ankyrin repeat domain 9 2 2
MIRT023279 RLN1 relaxin 1 1 1
MIRT023280 DDIT3 DNA damage inducible transcript 3 1 1
MIRT023281 TRIM65 tripartite motif containing 65 1 1
MIRT023282 B4GALT1 beta-1,4-galactosyltransferase 1 1 1
MIRT023283 ANXA7 annexin A7 1 1
MIRT023284 SLC19A2 solute carrier family 19 member 2 1 1
MIRT023285 MARCKS myristoylated alanine rich protein kinase C substrate 1 1
MIRT023286 CLEC11A C-type lectin domain containing 11A 1 1
MIRT023287 CENPF centromere protein F 1 1
MIRT023288 CLDN18 claudin 18 1 1
MIRT023289 PFDN1 prefoldin subunit 1 1 1
MIRT023290 SPAG9 sperm associated antigen 9 1 1
MIRT023291 CEACAM8 carcinoembryonic antigen related cell adhesion molecule 8 1 1
MIRT023292 KRT10 keratin 10 1 1
MIRT023293 SET SET nuclear proto-oncogene 1 1
MIRT023294 SLC11A2 solute carrier family 11 member 2 1 1
MIRT023295 MYCBP MYC binding protein 2 2
MIRT023296 GPHB5 glycoprotein hormone beta 5 1 1
MIRT023297 STAU2 staufen double-stranded RNA binding protein 2 1 1
MIRT023298 NFATC1 nuclear factor of activated T-cells 1 1 1
MIRT023299 ERP29 endoplasmic reticulum protein 29 1 1
MIRT023300 MEP1A meprin A subunit alpha 1 1
MIRT023301 SPTLC1 serine palmitoyltransferase long chain base subunit 1 1 1
MIRT023302 GTF2H2 general transcription factor IIH subunit 2 1 1
MIRT023303 C14orf39 chromosome 14 open reading frame 39 1 1
MIRT023304 UBE2K ubiquitin conjugating enzyme E2 K 1 1
MIRT023305 PPP1R9B protein phosphatase 1 regulatory subunit 9B 1 1
MIRT023306 PSMD10 proteasome 26S subunit, non-ATPase 10 1 1
MIRT023307 CALD1 caldesmon 1 1 1
MIRT023308 TTYH3 tweety family member 3 1 1
MIRT023309 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 1 1
MIRT023310 SCN4B sodium voltage-gated channel beta subunit 4 1 1
MIRT023311 C1orf122 chromosome 1 open reading frame 122 1 1
MIRT023312 PAK1 p21 (RAC1) activated kinase 1 1 1
MIRT023313 DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 1 1
MIRT023314 DMXL1 Dmx like 1 1 1
MIRT023315 ZNF160 zinc finger protein 160 1 1
MIRT023316 CSRP1 cysteine and glycine rich protein 1 1 1
MIRT023317 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT023318 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 1 1
MIRT023319 ANKRD13C ankyrin repeat domain 13C 1 1
MIRT023320 SUCLA2 succinate-CoA ligase ADP-forming beta subunit 1 1
MIRT023321 PEA15 phosphoprotein enriched in astrocytes 15 1 1
MIRT023322 MTPN myotrophin 1 1
MIRT023323 YKT6 YKT6 v-SNARE homolog 1 1
MIRT023324 MOB3B MOB kinase activator 3B 1 1
MIRT023325 FAM118A family with sequence similarity 118 member A 1 1
MIRT023326 ZNF264 zinc finger protein 264 1 1
MIRT023327 HECTD3 HECT domain E3 ubiquitin protein ligase 3 1 1
MIRT023328 BATF2 basic leucine zipper ATF-like transcription factor 2 1 1
MIRT023329 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 1 1
MIRT023330 MAPRE1 microtubule associated protein RP/EB family member 1 1 1
MIRT023331 TBC1D22B TBC1 domain family member 22B 1 1
MIRT023332 SLC9A1 solute carrier family 9 member A1 2 2
MIRT023333 NPEPPS aminopeptidase puromycin sensitive 1 1
MIRT023334 BCL2L1 BCL2 like 1 2 1
MIRT023335 OSMR oncostatin M receptor 1 1
MIRT023336 CALU calumenin 1 1
MIRT023337 BRI3BP BRI3 binding protein 1 1
MIRT023338 PSPH phosphoserine phosphatase 1 1
MIRT023339 APMAP adipocyte plasma membrane associated protein 1 1
MIRT023340 WASF1 WAS protein family member 1 1 1
MIRT023341 LCA5 LCA5, lebercilin 1 1
MIRT023342 NODAL nodal growth differentiation factor 1 1
MIRT023343 CASP7 caspase 7 1 1
MIRT023344 CPA3 carboxypeptidase A3 1 1
MIRT023345 PALM paralemmin 1 1
MIRT023346 TCP11 t-complex 11 1 1
MIRT023347 NALCN sodium leak channel, non-selective 1 1
MIRT023348 PLAGL2 PLAG1 like zinc finger 2 1 1
MIRT023349 IDS iduronate 2-sulfatase 2 2
MIRT023350 PARP11 poly(ADP-ribose) polymerase family member 11 1 1
MIRT023351 MAZ MYC associated zinc finger protein 1 1
MIRT023352 CPNE4 copine 4 1 1
MIRT023353 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 1 1
MIRT023354 KRT14 keratin 14 1 1
MIRT023355 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 1 1
MIRT023356 GNL3L G protein nucleolar 3 like 1 1
MIRT023357 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 1 1
MIRT023358 EYA4 EYA transcriptional coactivator and phosphatase 4 1 1
MIRT023359 GNPDA2 glucosamine-6-phosphate deaminase 2 1 1
MIRT023360 BRCA2 BRCA2, DNA repair associated 1 1
MIRT023361 ZSCAN4 zinc finger and SCAN domain containing 4 1 1
MIRT023362 HSPA5 heat shock protein family A (Hsp70) member 5 1 1
MIRT023363 SERAC1 serine active site containing 1 1 1
MIRT023364 SLC15A2 solute carrier family 15 member 2 1 1
MIRT023365 RABIF RAB interacting factor 1 1
MIRT023366 ART3 ADP-ribosyltransferase 3 1 1
MIRT023367 EP400 E1A binding protein p400 1 1
MIRT023368 MT4 metallothionein 4 1 1
MIRT023369 TRAM2 translocation associated membrane protein 2 1 1
MIRT023370 PHPT1 phosphohistidine phosphatase 1 1 1
MIRT023371 KIAA0101 PCNA clamp associated factor 1 1
MIRT023372 VHL von Hippel-Lindau tumor suppressor 1 1
MIRT023373 IFNA1 interferon alpha 1 1 1
MIRT023374 FSTL3 follistatin like 3 1 1
MIRT023375 PHF14 PHD finger protein 14 1 1
MIRT023376 ZCCHC2 zinc finger CCHC-type containing 2 1 1
MIRT023377 GSTM3 glutathione S-transferase mu 3 1 1
MIRT023378 DCTN5 dynactin subunit 5 1 1
MIRT023379 CHST3 carbohydrate sulfotransferase 3 1 1
MIRT023380 HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 1 1
MIRT023381 ADO 2-aminoethanethiol dioxygenase 1 1
MIRT023382 POMZP3 POM121 and ZP3 fusion 1 1
MIRT023383 CHST12 carbohydrate sulfotransferase 12 1 1
MIRT023384 ARSB arylsulfatase B 1 1
MIRT023385 ATP7A ATPase copper transporting alpha 1 1
MIRT023386 PMP22 peripheral myelin protein 22 1 1
MIRT023387 TGFBRAP1 transforming growth factor beta receptor associated protein 1 1 1
MIRT023388 ORC2 origin recognition complex subunit 2 1 1
MIRT023389 CREB1 cAMP responsive element binding protein 1 1 1
MIRT023390 CD83 CD83 molecule 1 1
MIRT023391 TOB2 transducer of ERBB2, 2 2 3
MIRT023392 LRP11 LDL receptor related protein 11 1 1
MIRT023393 MPV17 MPV17, mitochondrial inner membrane protein 1 1
MIRT023394 TRIM29 tripartite motif containing 29 1 1
MIRT023395 OSBP2 oxysterol binding protein 2 1 1
MIRT023396 PKM pyruvate kinase, muscle 5 3
MIRT023397 FOXK2 forkhead box K2 2 2
MIRT023398 CLIC4 chloride intracellular channel 4 4 4
MIRT023399 ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 1 1
MIRT023400 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 1 1
MIRT023401 LMNB2 lamin B2 2 3
MIRT023402 BAX BCL2 associated X, apoptosis regulator 2 2
MIRT023403 CDK4 cyclin dependent kinase 4 2 2
MIRT054362 Cux1 cut-like homeobox 1 1 1
MIRT074336 TNRC6A trinucleotide repeat containing 6A 1 1
MIRT109185 VMA21 VMA21, vacuolar ATPase assembly factor 1 2
MIRT324745 ACER2 alkaline ceramidase 2 1 1
MIRT325564 HIATL1 major facilitator superfamily domain containing 14B 1 2
MIRT438005 MEF2D myocyte enhancer factor 2D 1 2
MIRT438206 TGFB1 transforming growth factor beta 1 1 1
MIRT438639 AXL AXL receptor tyrosine kinase 1 1
MIRT438655 NOD2 nucleotide binding oligomerization domain containing 2 3 1
MIRT438734 FUT8 fucosyltransferase 8 3 1
MIRT449879 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 1
MIRT451716 OLR1 oxidized low density lipoprotein receptor 1 1 1
MIRT453274 EFTUD2 elongation factor Tu GTP binding domain containing 2 1 1
MIRT454113 MRPL52 mitochondrial ribosomal protein L52 1 1
MIRT454232 OSBPL10 oxysterol binding protein like 10 1 7
MIRT454344 CDKL1 cyclin dependent kinase like 1 1 1
MIRT455826 ZSWIM1 zinc finger SWIM-type containing 1 1 1
MIRT459903 PIGO phosphatidylinositol glycan anchor biosynthesis class O 1 6
MIRT461654 G6PC glucose-6-phosphatase catalytic subunit 1 1
MIRT461934 TNFSF14 TNF superfamily member 14 1 1
MIRT463834 WSB1 WD repeat and SOCS box containing 1 1 1
MIRT468615 SUMO1 small ubiquitin-like modifier 1 1 1
MIRT469456 REL REL proto-oncogene, NF-kB subunit 1 3
MIRT469637 RAD21 RAD21 cohesin complex component 1 3
MIRT473432 MDM4 MDM4, p53 regulator 1 1
MIRT473872 MAFK MAF bZIP transcription factor K 1 3
MIRT476861 FHL2 four and a half LIM domains 2 1 2
MIRT476893 FBXO21 F-box protein 21 1 1
MIRT479880 CCDC43 coiled-coil domain containing 43 1 1
MIRT488848 UBTF upstream binding transcription factor, RNA polymerase I 1 1
MIRT491164 LRP3 LDL receptor related protein 3 1 1
MIRT497662 PRMT3 protein arginine methyltransferase 3 1 1
MIRT499314 ZNF485 zinc finger protein 485 1 5
MIRT499759 CIRH1A UTP4, small subunit processome component 1 5
MIRT500014 ABCF2 ATP binding cassette subfamily F member 2 1 4
MIRT501090 SLC7A5 solute carrier family 7 member 5 1 2
MIRT509646 ZNF354B zinc finger protein 354B 1 5
MIRT509945 TOMM70A translocase of outer mitochondrial membrane 70 1 3
MIRT510320 SLC2A3 solute carrier family 2 member 3 1 2
MIRT515505 GTF2F1 general transcription factor IIF subunit 1 1 1
MIRT516410 COPA coatomer protein complex subunit alpha 1 1
MIRT517861 NCAPD2 non-SMC condensin I complex subunit D2 1 2
MIRT522558 MCAM melanoma cell adhesion molecule 1 2
MIRT523525 GLUL glutamate-ammonia ligase 1 1
MIRT523764 FBXO27 F-box protein 27 1 2
MIRT524517 CDK19 cyclin dependent kinase 19 1 1
MIRT524753 BIRC5 baculoviral IAP repeat containing 5 1 3
MIRT529366 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 1 2
MIRT531189 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 1 1
MIRT531639 C19orf52 translocase of inner mitochondrial membrane 29 1 2
MIRT531913 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 1 1
MIRT532678 PATZ1 POZ/BTB and AT hook containing zinc finger 1 1 1
MIRT533115 YIPF4 Yip1 domain family member 4 1 2
MIRT534740 RBM47 RNA binding motif protein 47 1 1
MIRT535471 PARVB parvin beta 1 2
MIRT536742 HSPA4L heat shock protein family A (Hsp70) member 4 like 1 1
MIRT537237 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 1 1
MIRT539523 ABCF1 ATP binding cassette subfamily F member 1 1 2
MIRT540438 RBM43 RNA binding motif protein 43 1 1
MIRT542982 ERC1 ELKS/RAB6-interacting/CAST family member 1 1 1
MIRT544674 AP1S1 adaptor related protein complex 1 sigma 1 subunit 1 1
MIRT549514 HDDC2 HD domain containing 2 1 1
MIRT549663 ORC6 origin recognition complex subunit 6 1 2
MIRT555420 PPIC peptidylprolyl isomerase C 1 1
MIRT564701 ZNF322P1 zinc finger protein 322 pseudogene 1 1 1
MIRT570046 PKNOX1 PBX/knotted 1 homeobox 1 1 1
MIRT570257 PRSS16 protease, serine 16 1 1
MIRT571143 HM13 histocompatibility minor 13 1 1
MIRT575202 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 1 1
MIRT575282 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 1 1
MIRT575302 Osbpl10 oxysterol binding protein-like 10 1 1
MIRT575323 Fbxo6 F-box protein 6 1 1
MIRT575377 Ang angiogenin, ribonuclease, RNase A family, 5 1 1
MIRT575614 Zswim1 zinc finger SWIM-type containing 1 1 1
MIRT575671 Map1b microtubule-associated protein 1B 1 1
MIRT607065 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 1 1
MIRT607490 HEBP2 heme binding protein 2 1 1
MIRT607522 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 1 1
MIRT607655 BTN3A2 butyrophilin subfamily 3 member A2 1 1
MIRT607795 RHBDL2 rhomboid like 2 1 1
MIRT607842 PHLDA3 pleckstrin homology like domain family A member 3 1 1
MIRT607927 ANG angiogenin 1 1
MIRT607966 SNX22 sorting nexin 22 1 1
MIRT608074 ZFP14 ZFP14 zinc finger protein 1 1
MIRT608141 SYAP1 synapse associated protein 1 1 1
MIRT612620 RABL3 RAB, member of RAS oncogene family like 3 1 1
MIRT617444 CCS copper chaperone for superoxide dismutase 1 1
MIRT617552 MTO1 mitochondrial tRNA translation optimization 1 1 1
MIRT618772 HLA-E major histocompatibility complex, class I, E 1 1
MIRT618926 MEAF6 MYST/Esa1 associated factor 6 1 1
MIRT619247 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 1 1
MIRT620091 YME1L1 YME1 like 1 ATPase 1 1
MIRT620483 XKR6 XK related 6 1 1
MIRT620570 WBSCR27 methyltransferase like 27 1 2
MIRT622977 ORAI2 ORAI calcium release-activated calcium modulator 2 1 1
MIRT623169 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 1 1
MIRT624165 DGKE diacylglycerol kinase epsilon 1 1
MIRT625268 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 1 1
MIRT625396 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 1 1
MIRT625694 OPTN optineurin 1 1
MIRT626093 MKLN1 muskelin 1 1 1
MIRT626431 CHDH choline dehydrogenase 1 1
MIRT627013 FIG4 FIG4 phosphoinositide 5-phosphatase 1 1
MIRT627077 SF3A1 splicing factor 3a subunit 1 1 1
MIRT627140 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 1 1
MIRT627347 TSHZ2 teashirt zinc finger homeobox 2 1 1
MIRT627420 THAP2 THAP domain containing 2 1 1
MIRT627441 TAS2R5 taste 2 receptor member 5 1 1
MIRT628078 KAT7 lysine acetyltransferase 7 1 2
MIRT628276 CYB5D1 cytochrome b5 domain containing 1 1 1
MIRT629094 F2RL1 F2R like trypsin receptor 1 1 1
MIRT629236 CINP cyclin dependent kinase 2 interacting protein 1 1
MIRT629286 UNC13A unc-13 homolog A 1 1
MIRT629407 ADM2 adrenomedullin 2 1 1
MIRT629584 RFC2 replication factor C subunit 2 1 1
MIRT629635 WDR31 WD repeat domain 31 1 1
MIRT629874 NOM1 nucleolar protein with MIF4G domain 1 1 1
MIRT629984 NARS asparaginyl-tRNA synthetase 1 1
MIRT630043 TERF2 telomeric repeat binding factor 2 1 1
MIRT630061 NIP7 NIP7, nucleolar pre-rRNA processing protein 1 1
MIRT630127 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 1
MIRT630155 ZBTB8A zinc finger and BTB domain containing 8A 1 1
MIRT630252 SMTNL2 smoothelin like 2 1 1
MIRT630278 PSMB5 proteasome subunit beta 5 1 1
MIRT630347 NKAP NFKB activating protein 1 1
MIRT630497 CYP20A1 cytochrome P450 family 20 subfamily A member 1 1 1
MIRT631264 CENPM centromere protein M 1 1
MIRT631403 IL2RA interleukin 2 receptor subunit alpha 1 1
MIRT632470 RPS15A ribosomal protein S15a 1 1
MIRT632596 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 1 1
MIRT632994 DUSP18 dual specificity phosphatase 18 1 1
MIRT633082 CXorf21 chromosome X open reading frame 21 1 1
MIRT633239 ZNF573 zinc finger protein 573 1 1
MIRT633286 SLC1A5 solute carrier family 1 member 5 1 1
MIRT633536 PGBD5 piggyBac transposable element derived 5 1 1
MIRT634338 SGOL1 shugoshin 1 1 1
MIRT634600 KIAA1919 major facilitator superfamily domain containing 4B 1 1
MIRT635050 MYH11 myosin heavy chain 11 1 1
MIRT635236 QPRT quinolinate phosphoribosyltransferase 1 1
MIRT635322 BMS1 BMS1, ribosome biogenesis factor 1 1
MIRT636268 RNF157 ring finger protein 157 1 1
MIRT636450 LRCH3 leucine rich repeats and calponin homology domain containing 3 1 1
MIRT636516 FMN1 formin 1 1 1
MIRT636755 SLC16A5 solute carrier family 16 member 5 1 1
MIRT637134 BAMBI BMP and activin membrane bound inhibitor 1 1
MIRT637188 ROMO1 reactive oxygen species modulator 1 1 1
MIRT637287 IBA57 IBA57 homolog, iron-sulfur cluster assembly 1 1
MIRT637532 RGS9BP regulator of G protein signaling 9 binding protein 1 1
MIRT637693 CEP89 centrosomal protein 89 1 1
MIRT637788 OLA1 Obg like ATPase 1 1 1
MIRT637925 LILRA2 leukocyte immunoglobulin like receptor A2 1 1
MIRT638449 PLXDC2 plexin domain containing 2 1 1
MIRT640871 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 1 1
MIRT642643 PTGR2 prostaglandin reductase 2 1 1
MIRT643082 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT643123 FAM71F2 family with sequence similarity 71 member F2 1 1
MIRT644236 SLC35E3 solute carrier family 35 member E3 1 1
MIRT644665 TMCO1 transmembrane and coiled-coil domains 1 1 1
MIRT645092 SLC35E2B solute carrier family 35 member E2B 1 1
MIRT645993 ACP6 acid phosphatase 6, lysophosphatidic 1 1
MIRT646508 FAM217B family with sequence similarity 217 member B 1 1
MIRT647013 ADCY2 adenylate cyclase 2 1 1
MIRT647095 SEC23B Sec23 homolog B, coat complex II component 1 1
MIRT647714 NFX1 nuclear transcription factor, X-box binding 1 1 2
MIRT648040 FADS6 fatty acid desaturase 6 1 1
MIRT648510 PIGG phosphatidylinositol glycan anchor biosynthesis class G 1 1
MIRT648865 ABCA6 ATP binding cassette subfamily A member 6 1 1
MIRT649182 DNPEP aspartyl aminopeptidase 1 1
MIRT649660 TEP1 telomerase associated protein 1 1 1
MIRT651465 XIAP X-linked inhibitor of apoptosis 1 1
MIRT652398 TMEM40 transmembrane protein 40 1 1
MIRT653691 SLC25A33 solute carrier family 25 member 33 1 1
MIRT654122 RPS6KA5 ribosomal protein S6 kinase A5 1 1
MIRT654577 PXMP4 peroxisomal membrane protein 4 1 1
MIRT656470 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 1 1
MIRT658905 DPY19L4 dpy-19 like 4 1 1
MIRT660878 ADRBK2 G protein-coupled receptor kinase 3 1 2
MIRT661101 SPIB Spi-B transcription factor 1 1
MIRT661238 ARL17B ADP ribosylation factor like GTPase 17B 1 1
MIRT661291 LIN52 lin-52 DREAM MuvB core complex component 1 1
MIRT662235 PGBD4 piggyBac transposable element derived 4 1 1
MIRT662544 MTAP methylthioadenosine phosphorylase 1 1
MIRT662736 LRRC3C leucine rich repeat containing 3C 1 1
MIRT662844 OMD osteomodulin 1 1
MIRT662907 MED18 mediator complex subunit 18 1 1
MIRT662956 JPH2 junctophilin 2 1 1
MIRT663340 ZNF74 zinc finger protein 74 1 1
MIRT663496 IYD iodotyrosine deiodinase 1 1
MIRT663523 MASTL microtubule associated serine/threonine kinase like 1 1
MIRT663542 CCR6 C-C motif chemokine receptor 6 1 1
MIRT663903 MRI1 methylthioribose-1-phosphate isomerase 1 1 1
MIRT663973 ZNF786 zinc finger protein 786 1 1
MIRT664350 C16orf45 chromosome 16 open reading frame 45 1 1
MIRT664417 TIGD6 tigger transposable element derived 6 1 1
MIRT664468 ZYG11B zyg-11 family member B, cell cycle regulator 1 1
MIRT664957 PTCD3 pentatricopeptide repeat domain 3 1 1
MIRT664970 TDRD1 tudor domain containing 1 1 1
MIRT665199 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 1 1
MIRT665359 XKR4 XK related 4 1 1
MIRT665454 WDR17 WD repeat domain 17 1 1
MIRT665486 VPS53 VPS53, GARP complex subunit 1 1
MIRT666078 SSTR2 somatostatin receptor 2 1 1
MIRT666258 SLC31A1 solute carrier family 31 member 1 1 1
MIRT666324 SLC16A10 solute carrier family 16 member 10 1 1
MIRT666486 SBNO1 strawberry notch homolog 1 1 1
MIRT666696 RBM23 RNA binding motif protein 23 1 1
MIRT666712 RBL1 RB transcriptional corepressor like 1 1 1
MIRT666762 RAB10 RAB10, member RAS oncogene family 1 1
MIRT666931 PNRC1 proline rich nuclear receptor coactivator 1 1 1
MIRT667226 NFE2L1 nuclear factor, erythroid 2 like 1 1 1
MIRT667359 MPLKIP M-phase specific PLK1 interacting protein 1 1
MIRT667474 MAPK1 mitogen-activated protein kinase 1 1 1
MIRT667558 LRAT lecithin retinol acyltransferase 1 1
MIRT667748 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 1 1
MIRT668088 GMEB1 glucocorticoid modulatory element binding protein 1 1 1
MIRT668119 GK5 glycerol kinase 5 (putative) 1 1
MIRT668166 GDE1 glycerophosphodiester phosphodiesterase 1 1 1
MIRT668346 STXBP2 syntaxin binding protein 2 1 1
MIRT668509 ESYT2 extended synaptotagmin 2 1 1
MIRT669291 C17orf85 nuclear cap binding subunit 3 1 1
MIRT669547 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT669778 CNDP1 carnosine dipeptidase 1 1 1
MIRT669858 BROX BRO1 domain and CAAX motif containing 1 2
MIRT670017 TECPR1 tectonin beta-propeller repeat containing 1 1 1
MIRT670177 CCDC142 coiled-coil domain containing 142 1 1
MIRT671107 ZNF841 zinc finger protein 841 1 1
MIRT671351 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 1 1
MIRT671476 FLYWCH2 FLYWCH family member 2 1 1
MIRT671492 SLC38A9 solute carrier family 38 member 9 1 1
MIRT671554 LIMS1 LIM zinc finger domain containing 1 1 1
MIRT671925 PLEKHS1 pleckstrin homology domain containing S1 1 2
MIRT672196 F2 coagulation factor II, thrombin 1 1
MIRT672217 DCAF7 DDB1 and CUL4 associated factor 7 1 1
MIRT672252 SIK2 salt inducible kinase 2 1 1
MIRT672290 GP2 glycoprotein 2 1 1
MIRT672430 POLR2D RNA polymerase II subunit D 1 1
MIRT672597 NKPD1 NTPase KAP family P-loop domain containing 1 1 1
MIRT672901 KRBA2 KRAB-A domain containing 2 1 1
MIRT672958 ZNF655 zinc finger protein 655 1 1
MIRT673096 SYNPO2L synaptopodin 2 like 1 1
MIRT673171 TMEM56 transmembrane protein 56 1 1
MIRT673251 INO80 INO80 complex subunit 1 1
MIRT673296 RNF19B ring finger protein 19B 1 1
MIRT673574 KDELC2 KDEL motif containing 2 1 1
MIRT673586 KIF1C kinesin family member 1C 1 1
MIRT673737 TCF23 transcription factor 23 1 1
MIRT673767 MRPL17 mitochondrial ribosomal protein L17 1 1
MIRT674215 FAM120AOS family with sequence similarity 120A opposite strand 1 1
MIRT674283 NAGK N-acetylglucosamine kinase 1 1
MIRT674338 KCMF1 potassium channel modulatory factor 1 1 1
MIRT674517 PRR23A proline rich 23A 1 1
MIRT675100 SNTB2 syntrophin beta 2 1 1
MIRT675144 MOGAT1 monoacylglycerol O-acyltransferase 1 1 2
MIRT675223 CLK4 CDC like kinase 4 1 1
MIRT675263 ZNF431 zinc finger protein 431 1 1
MIRT675577 WWC1 WW and C2 domain containing 1 1 1
MIRT676025 C9orf69 transmembrane protein 250 1 1
MIRT676430 PLEKHM3 pleckstrin homology domain containing M3 1 1
MIRT676560 VSIG1 V-set and immunoglobulin domain containing 1 1 1
MIRT676596 ARIH2OS ariadne RBR E3 ubiquitin protein ligase 2 opposite strand 1 1
MIRT678576 TMEM168 transmembrane protein 168 1 1
MIRT678756 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 1 1
MIRT680344 ZNF281 zinc finger protein 281 1 1
MIRT680467 C3 complement C3 1 1
MIRT682826 FLG2 filaggrin family member 2 1 1
MIRT682881 SAR1A secretion associated Ras related GTPase 1A 1 1
MIRT684404 TMEM180 major facilitator superfamily domain containing 13A 1 1
MIRT685275 KIAA1143 KIAA1143 1 1
MIRT686061 KCNA7 potassium voltage-gated channel subfamily A member 7 1 1
MIRT687526 NASP nuclear autoantigenic sperm protein 1 1
MIRT691760 BCL2L15 BCL2 like 15 1 1
MIRT693890 C3orf62 chromosome 3 open reading frame 62 1 1
MIRT699342 SLC35E1 solute carrier family 35 member E1 1 1
MIRT699909 RUNDC1 RUN domain containing 1 1 1
MIRT700536 PTPDC1 protein tyrosine phosphatase domain containing 1 1 1
MIRT701807 MRPS25 mitochondrial ribosomal protein S25 1 1
MIRT702174 LYRM4 LYR motif containing 4 1 1
MIRT706205 ACOT9 acyl-CoA thioesterase 9 1 1
MIRT706659 RNF216 ring finger protein 216 1 1
MIRT706682 COL13A1 collagen type XIII alpha 1 chain 1 1
MIRT706705 GPR155 G protein-coupled receptor 155 1 1
MIRT706777 ANKRD36 ankyrin repeat domain 36 1 1
MIRT706844 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 1 1
MIRT706863 MAFF MAF bZIP transcription factor F 1 1
MIRT706896 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 1 1
MIRT706916 THAP6 THAP domain containing 6 1 1
MIRT706962 FANCC Fanconi anemia complementation group C 1 1
MIRT706980 XPO5 exportin 5 1 1
MIRT707015 RRP36 ribosomal RNA processing 36 1 1
MIRT707032 ACTR5 ARP5 actin related protein 5 homolog 1 1
MIRT707072 MED29 mediator complex subunit 29 1 1
MIRT709368 SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 1 1
MIRT720092 SPTLC3 serine palmitoyltransferase long chain base subunit 3 1 1
MIRT721330 IFNAR2 interferon alpha and beta receptor subunit 2 1 1
MIRT724198 MED7 mediator complex subunit 7 1 1
MIRT725403 KIF6 kinesin family member 6 1 1
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